MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.07-4-gcbdc6580ee3d) initialized Starting run at 13:57:06 UTC on 2022-07-05. Successfully read inputs file ... Castro git describe: 22.06-16-g4e0e0753c AMReX git describe: 22.07-4-gcbdc6580e Microphysics git describe: 22.07-6-g94202288 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013676187 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.367145588 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.342306144 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.341955326 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.341381066 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.351644738 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.34729199 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.335908346 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.337569247 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.336174849 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.336749086 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009694405 seconds Ending run at 13:57:10 UTC on 2022-07-05. Run time = 3.636133302 Run time without initialization = 3.454586509 Average number of zones advanced per microsecond: 0.759 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.633 ... 3.635 ... 3.636 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1153 2.3982 2.4922 68.54% Castro::do_advance_ctu() 10 0.04675 0.1415 0.4288 11.79% Gravity::make_radial_gravity() 21 0.3451 0.3581 0.3836 10.55% Castro::initData() 1 0.04044 0.07799 0.114 3.14% FabArray::ParallelCopy_finish() 41 0.0384 0.05778 0.1102 3.03% Castro::estTimeStep() 21 0.02645 0.06684 0.09939 2.73% FabArray::setVal() 143 0.06868 0.07143 0.07326 2.01% Castro::reset_internal_energy(Fab) 1008 0.04946 0.05091 0.05233 1.44% FabArray::ParallelCopy_nowait() 41 0.02795 0.04428 0.05018 1.38% StateData::FillBoundary(geom) 41 0.03391 0.04208 0.04669 1.28% Castro::normalize_species() 62 0.04086 0.04168 0.04224 1.16% FillPatchIterator::Initialize 41 0.02057 0.03347 0.03807 1.05% Gravity::interpolate_monopole_grav() 21 0.026 0.02749 0.02816 0.77% Castro::construct_new_gravity_source() 10 0.02064 0.02348 0.02448 0.67% Castro::expand_state() 10 0.009647 0.01905 0.02273 0.63% Castro::computeTemp() 63 0.01774 0.01932 0.02056 0.57% Castro::initialize_do_advance() 10 0.008582 0.01682 0.01951 0.54% MultiFab::Saxpy() 20 0.01137 0.01519 0.01691 0.47% VisMF::Write(FabArray) 2 0.01068 0.01147 0.01398 0.38% Amr::writePlotFile() 2 0.009583 0.01221 0.01323 0.36% Gravity::get_new_grav_vector() 11 0.009321 0.01176 0.01303 0.36% FabArray::setDomainBndry() 41 0.004838 0.01049 0.01255 0.35% MultiFab::contains_nan() 20 0.01019 0.01127 0.0124 0.34% Castro::construct_old_gravity_source() 10 0.005788 0.01064 0.01234 0.34% Gravity::get_old_grav_vector() 10 0.005944 0.009753 0.01126 0.31% Castro::initialize_advance() 10 0.01061 0.01086 0.01108 0.30% Castro::initMFs() 1 0.005428 0.006387 0.008662 0.24% Castro::construct_new_source() 50 0.005287 0.006729 0.007356 0.20% Castro::enforce_min_density() 62 0.006466 0.006846 0.007318 0.20% StateData::define() 4 0.004485 0.005131 0.006669 0.18% main() 1 0.003273 0.005255 0.006104 0.17% Castro::swap_state_time_levels() 10 0.003037 0.004037 0.004502 0.12% Amr::coarseTimeStep() 10 0.0009365 0.001649 0.002992 0.08% Castro::buildMetrics() 1 0.00127 0.001465 0.001916 0.05% Castro::finalize_do_advance() 10 0.0005419 0.001116 0.00129 0.04% Amr::InitAmr() 1 0.0002759 0.0003372 0.000588 0.02% Amr::timeStep() 10 0.0001751 0.0002316 0.0005017 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002999 0.0003212 0.0003978 0.01% DistributionMapping::LeastUsedCPUs() 1 8.553e-06 0.0003155 0.0003907 0.01% Castro::clean_state() 62 0.0001287 0.0001667 0.0002362 0.01% StateDataPhysBCFunct::() 41 8.683e-05 0.0001287 0.0001541 0.00% Castro::enforce_consistent_e() 1 8.012e-05 8.938e-05 9.839e-05 0.00% FabArray::ParallelCopy() 41 6.633e-05 8.34e-05 9.572e-05 0.00% Castro::construct_old_source() 50 3.253e-05 7.286e-05 9.569e-05 0.00% Amr::FinalizeInit() 1 3.418e-06 1.61e-05 9.194e-05 0.00% Castro::do_old_sources() 10 4.282e-05 7.037e-05 9.128e-05 0.00% Castro::do_new_sources() 10 4.531e-05 7.089e-05 8.754e-05 0.00% Castro::Castro() 1 5.42e-05 6.034e-05 7.98e-05 0.00% FillPatchSingleLevel 41 6.412e-05 6.939e-05 7.39e-05 0.00% Castro::apply_source_to_state() 20 3.096e-05 4.756e-05 6.735e-05 0.00% Amr::writeSmallPlotFile() 1 2.489e-05 4.931e-05 6.711e-05 0.00% Castro::subcycle_advance_ctu() 10 3.338e-05 4.873e-05 6.629e-05 0.00% FabArrayBase::getCPC() 41 4.557e-05 5.586e-05 6.584e-05 0.00% Castro::construct_old_gravity() 10 3.513e-05 5.225e-05 6.32e-05 0.00% Castro::finalize_advance() 10 4.646e-05 5.329e-05 5.97e-05 0.00% Castro::construct_new_gravity() 10 3.746e-05 4.451e-05 4.929e-05 0.00% Castro::advance() 10 3.119e-05 4.099e-05 4.65e-05 0.00% FabArrayBase::CPC::define() 2 2.173e-05 2.782e-05 4.417e-05 0.00% Castro::enforce_speed_limit() 62 2.042e-05 2.774e-05 3.319e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.478e-05 2.156e-05 2.774e-05 0.00% Amr::defBaseLevel() 1 1.951e-05 2.332e-05 2.772e-05 0.00% Castro::check_for_nan() 20 1.873e-05 2.289e-05 2.466e-05 0.00% Gravity::swapTimeLevels() 10 9.232e-06 1.334e-05 1.732e-05 0.00% Castro::post_timestep() 10 1.116e-05 1.338e-05 1.564e-05 0.00% Amr::initSubcycle() 1 7.821e-06 9.867e-06 1.39e-05 0.00% Castro::create_source_corrector() 10 6.757e-06 1.017e-05 1.241e-05 0.00% Gravity::set_mass_offset() 10 6.724e-06 9.764e-06 1.183e-05 0.00% Castro::computeNewDt() 9 6.833e-06 9.395e-06 1.156e-05 0.00% Castro::FluxRegCrseInit 10 6.968e-06 9.327e-06 1.129e-05 0.00% Amr::InitializeInit() 1 2.218e-06 3.388e-06 1.004e-05 0.00% Castro::retry_advance_ctu() 10 4.894e-06 6.547e-06 7.424e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.986e-06 4.87e-06 6.927e-06 0.00% Castro::computeInitialDt() 2 3.097e-06 4.578e-06 5.524e-06 0.00% Castro::post_regrid() 1 1.849e-06 3.144e-06 5.44e-06 0.00% Castro::post_init() 1 2.557e-06 3.519e-06 4.111e-06 0.00% Castro::FluxRegFineAdd() 10 1.972e-06 2.613e-06 3.277e-06 0.00% Amr::init() 1 1.931e-06 2.43e-06 2.92e-06 0.00% Amr::initialInit() 1 1.388e-06 1.639e-06 2.006e-06 0.00% DistributionMapping::Distribute() 1 9.73e-07 1.14e-06 1.332e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.633 3.635 3.636 100.00% Amr::coarseTimeStep() 10 3.439 3.439 3.439 94.57% Amr::timeStep() 10 3.428 3.429 3.43 94.32% Castro::advance() 10 3.412 3.413 3.413 93.86% Castro::subcycle_advance_ctu() 10 3.338 3.34 3.343 91.94% Castro::do_advance_ctu() 10 3.338 3.34 3.343 91.93% Castro::construct_ctu_hydro_source() 10 2.115 2.398 2.492 68.54% Gravity::make_radial_gravity() 21 0.3451 0.3581 0.3836 10.55% Castro::construct_old_gravity() 10 0.2038 0.2156 0.2373 6.53% Gravity::get_old_grav_vector() 10 0.2029 0.2148 0.2366 6.51% Gravity::get_new_grav_vector() 11 0.228 0.2332 0.2357 6.48% Castro::construct_new_gravity() 10 0.2016 0.2062 0.2083 5.73% FillPatchIterator::Initialize 41 0.1811 0.1885 0.1977 5.44% Amr::init() 1 0.1808 0.1811 0.1811 4.98% Castro::initialize_do_advance() 10 0.151 0.1712 0.1796 4.94% FillPatchSingleLevel 41 0.1315 0.1445 0.1723 4.74% Amr::initialInit() 1 0.167 0.1671 0.1674 4.60% FabArray::ParallelCopy() 41 0.08773 0.1022 0.1382 3.80% Amr::InitializeInit() 1 0.06322 0.09743 0.1368 3.76% Amr::defBaseLevel() 1 0.06321 0.09743 0.1368 3.76% Castro::expand_state() 10 0.1147 0.1238 0.1303 3.58% Castro::clean_state() 62 0.1144 0.1183 0.1215 3.34% Castro::initData() 1 0.04409 0.08191 0.118 3.25% FabArray::ParallelCopy_finish() 41 0.0384 0.05778 0.1102 3.03% Amr::FinalizeInit() 1 0.03014 0.06971 0.1037 2.85% Castro::estTimeStep() 21 0.02645 0.06684 0.09939 2.73% Castro::computeInitialDt() 2 0.001807 0.04131 0.07521 2.07% Castro::initialize_advance() 10 0.0698 0.07309 0.07459 2.05% FabArray::setVal() 143 0.06868 0.07143 0.07326 2.01% Castro::computeTemp() 63 0.06792 0.07055 0.07322 2.01% Castro::do_new_sources() 10 0.06191 0.06521 0.06677 1.84% Castro::reset_internal_energy(MultiFab) 63 0.04977 0.05123 0.05265 1.45% Castro::reset_internal_energy(Fab) 1008 0.04946 0.05091 0.05233 1.44% Castro::do_old_sources() 10 0.03657 0.04699 0.05036 1.39% FabArray::ParallelCopy_nowait() 41 0.02802 0.04436 0.05027 1.38% StateDataPhysBCFunct::() 41 0.034 0.0422 0.04683 1.29% StateData::FillBoundary(geom) 41 0.03391 0.04208 0.04669 1.28% Castro::normalize_species() 62 0.04086 0.04168 0.04224 1.16% Castro::construct_new_source() 50 0.02603 0.03021 0.03176 0.87% Gravity::interpolate_monopole_grav() 21 0.026 0.02749 0.02816 0.77% Castro::post_init() 1 0.0276 0.02779 0.02804 0.77% Castro::construct_new_gravity_source() 10 0.02064 0.02348 0.02448 0.67% Amr::writePlotFile() 2 0.02353 0.02369 0.0239 0.66% Castro::apply_source_to_state() 20 0.01141 0.01523 0.01697 0.47% MultiFab::Saxpy() 20 0.01137 0.01519 0.01691 0.47% Castro::post_timestep() 10 0.01503 0.01597 0.01666 0.46% VisMF::Write(FabArray) 2 0.01068 0.01147 0.01398 0.38% FabArray::setDomainBndry() 41 0.004838 0.01049 0.01255 0.35% Castro::construct_old_source() 50 0.005821 0.01071 0.01244 0.34% Castro::check_for_nan() 20 0.01021 0.0113 0.01242 0.34% MultiFab::contains_nan() 20 0.01019 0.01127 0.0124 0.34% Castro::Castro() 1 0.008987 0.01002 0.01239 0.34% Castro::construct_old_gravity_source() 10 0.005788 0.01064 0.01234 0.34% Castro::initMFs() 1 0.005428 0.006387 0.008662 0.24% Castro::enforce_min_density() 62 0.006466 0.006846 0.007318 0.20% Castro::computeNewDt() 9 0.007175 0.007192 0.007208 0.20% AmrLevel::AmrLevel(dm) 1 0.00451 0.005153 0.006695 0.18% StateData::define() 4 0.004485 0.005131 0.006669 0.18% Castro::swap_state_time_levels() 10 0.003037 0.004037 0.004502 0.12% Castro::buildMetrics() 1 0.001388 0.00161 0.002127 0.06% Castro::post_regrid() 1 0.001524 0.001623 0.001978 0.05% Castro::finalize_do_advance() 10 0.0005419 0.001116 0.00129 0.04% Amr::InitAmr() 1 0.0002846 0.0003471 0.0006017 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.4e-05 0.0003215 0.0003967 0.01% DistributionMapping::LeastUsedCPUs() 1 8.553e-06 0.0003155 0.0003907 0.01% FabArrayBase::getCPC() 41 6.988e-05 8.368e-05 0.0001035 0.00% Castro::enforce_consistent_e() 1 8.012e-05 8.938e-05 9.839e-05 0.00% Castro::finalize_advance() 10 5.544e-05 6.523e-05 7.261e-05 0.00% Amr::writeSmallPlotFile() 1 2.489e-05 4.931e-05 6.711e-05 0.00% FabArrayBase::CPC::define() 2 2.173e-05 2.782e-05 4.417e-05 0.00% Castro::enforce_speed_limit() 62 2.042e-05 2.774e-05 3.319e-05 0.00% Gravity::swapTimeLevels() 10 9.232e-06 1.334e-05 1.732e-05 0.00% Amr::initSubcycle() 1 7.821e-06 9.867e-06 1.39e-05 0.00% Castro::create_source_corrector() 10 6.757e-06 1.017e-05 1.241e-05 0.00% Gravity::set_mass_offset() 10 6.724e-06 9.764e-06 1.183e-05 0.00% Castro::FluxRegCrseInit 10 6.968e-06 9.327e-06 1.129e-05 0.00% Castro::retry_advance_ctu() 10 4.894e-06 6.547e-06 7.424e-06 0.00% Castro::FluxRegFineAdd() 10 1.972e-06 2.613e-06 3.277e-06 0.00% DistributionMapping::Distribute() 1 9.73e-07 1.14e-06 1.332e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.07-4-gcbdc6580ee3d) finalized