MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.07-4-gcbdc6580ee3d) initialized Starting run at 05:38:21 UTC on 2022-07-05. Successfully read inputs file ... Castro git describe: 22.06-15-gd68821af9 AMReX git describe: 22.07-4-gcbdc6580e Microphysics git describe: 22.07-5-gcfab8d9a reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013144284 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.365091958 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.339782297 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.338595263 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.341367825 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.349853173 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.343809719 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.333631011 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.334904356 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.334446515 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.334714366 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009679766 seconds Ending run at 05:38:25 UTC on 2022-07-05. Run time = 3.662061729 Run time without initialization = 3.431995456 Average number of zones advanced per microsecond: 0.764 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.66 ... 3.662 ... 3.662 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1166 2.3873 2.4794 67.70% Castro::do_advance_ctu() 10 0.04468 0.1394 0.4159 11.36% Gravity::make_radial_gravity() 21 0.3387 0.3543 0.3751 10.24% Castro::initData() 1 0.03823 0.0901 0.1597 4.36% Castro::estTimeStep() 21 0.02607 0.1006 0.1566 4.28% FabArray::ParallelCopy_finish() 41 0.03692 0.05543 0.09993 2.73% FabArray::setVal() 143 0.06731 0.07098 0.07366 2.01% Castro::reset_internal_energy(Fab) 1008 0.04964 0.05123 0.05298 1.45% FabArray::ParallelCopy_nowait() 41 0.02957 0.04397 0.0495 1.35% StateData::FillBoundary(geom) 41 0.03501 0.04208 0.04614 1.26% Castro::normalize_species() 62 0.04124 0.04209 0.04325 1.18% FillPatchIterator::Initialize 41 0.02154 0.03353 0.03806 1.04% Gravity::interpolate_monopole_grav() 21 0.02691 0.02768 0.028 0.76% Castro::construct_new_gravity_source() 10 0.02327 0.0237 0.02419 0.66% Castro::expand_state() 10 0.0113 0.01954 0.02268 0.62% Castro::computeTemp() 63 0.01809 0.01949 0.02061 0.56% Castro::initialize_do_advance() 10 0.01228 0.01709 0.01845 0.50% MultiFab::Saxpy() 20 0.01145 0.01491 0.01668 0.46% VisMF::Write(FabArray) 2 0.01036 0.01148 0.01511 0.41% Gravity::get_new_grav_vector() 11 0.009793 0.01185 0.01345 0.37% FabArray::setDomainBndry() 41 0.005143 0.01076 0.01276 0.35% Amr::writePlotFile() 2 0.007954 0.01161 0.01273 0.35% MultiFab::contains_nan() 20 0.0103 0.01119 0.01251 0.34% Castro::construct_old_gravity_source() 10 0.00682 0.01068 0.01225 0.33% Gravity::get_old_grav_vector() 10 0.006423 0.009753 0.01152 0.31% Castro::initialize_advance() 10 0.01022 0.01071 0.01107 0.30% Castro::initMFs() 1 0.005307 0.006321 0.00838 0.23% Castro::construct_new_source() 50 0.005306 0.006667 0.007266 0.20% Castro::enforce_min_density() 62 0.006546 0.006878 0.007244 0.20% StateData::define() 4 0.004475 0.005162 0.006582 0.18% main() 1 0.003384 0.004739 0.005125 0.14% Castro::swap_state_time_levels() 10 0.003012 0.003923 0.00419 0.11% Castro::buildMetrics() 1 0.001269 0.00148 0.001884 0.05% Amr::coarseTimeStep() 10 0.001138 0.001391 0.001725 0.05% Castro::finalize_do_advance() 10 0.0009926 0.001213 0.001328 0.04% Amr::timeStep() 10 0.0001966 0.0002534 0.0005085 0.01% Amr::InitAmr() 1 0.0002531 0.0003264 0.0004364 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0003013 0.0003108 0.0003422 0.01% StateDataPhysBCFunct::() 41 0.0001102 0.0001403 0.0002587 0.01% DistributionMapping::LeastUsedCPUs() 1 7.931e-06 0.0001354 0.0002175 0.01% Castro::clean_state() 62 0.0001424 0.0001668 0.0001926 0.01% Castro::enforce_consistent_e() 1 8.48e-05 0.0001059 0.0001457 0.00% FabArray::ParallelCopy() 41 7e-05 8.789e-05 0.00011 0.00% Castro::construct_old_source() 50 3.607e-05 7.096e-05 0.0001017 0.00% Castro::Castro() 1 5.116e-05 6.626e-05 8.168e-05 0.00% Castro::do_new_sources() 10 4.551e-05 6.884e-05 8.097e-05 0.00% Castro::do_old_sources() 10 3.937e-05 6.759e-05 8.037e-05 0.00% FillPatchSingleLevel 41 5.392e-05 6.789e-05 7.922e-05 0.00% Amr::FinalizeInit() 1 4.767e-06 1.445e-05 7.777e-05 0.00% Castro::advance() 10 3.056e-05 4.87e-05 7.323e-05 0.00% Amr::writeSmallPlotFile() 1 3.033e-05 6.195e-05 7.096e-05 0.00% Castro::subcycle_advance_ctu() 10 4.177e-05 4.997e-05 6.754e-05 0.00% Castro::construct_old_gravity() 10 3.845e-05 5.36e-05 6.673e-05 0.00% FabArrayBase::getCPC() 41 5.373e-05 5.855e-05 6.231e-05 0.00% Castro::apply_source_to_state() 20 3.98e-05 4.975e-05 5.989e-05 0.00% Castro::finalize_advance() 10 5.012e-05 5.428e-05 5.835e-05 0.00% Castro::construct_new_gravity() 10 3.902e-05 4.595e-05 5.565e-05 0.00% Castro::enforce_speed_limit() 62 2.905e-05 3.123e-05 3.422e-05 0.00% FabArrayBase::CPC::define() 2 2.406e-05 2.631e-05 3.041e-05 0.00% Castro::check_for_nan() 20 2.023e-05 2.255e-05 2.438e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.553e-05 1.873e-05 2.434e-05 0.00% Amr::defBaseLevel() 1 1.774e-05 2.009e-05 2.313e-05 0.00% Castro::post_timestep() 10 1.201e-05 1.364e-05 1.537e-05 0.00% Gravity::swapTimeLevels() 10 8.461e-06 1.296e-05 1.503e-05 0.00% Castro::create_source_corrector() 10 6.887e-06 1.053e-05 1.442e-05 0.00% Amr::initSubcycle() 1 7.711e-06 1.063e-05 1.382e-05 0.00% Castro::FluxRegCrseInit 10 6.736e-06 9.581e-06 1.283e-05 0.00% Gravity::set_mass_offset() 10 7.765e-06 9.563e-06 1.112e-05 0.00% Castro::computeNewDt() 9 6.319e-06 8.867e-06 1.094e-05 0.00% Castro::retry_advance_ctu() 10 5.286e-06 6.314e-06 7.766e-06 0.00% Castro::post_init() 1 3.536e-06 4.506e-06 6.481e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.486e-06 4.716e-06 6.194e-06 0.00% Amr::InitializeInit() 1 2.017e-06 3.491e-06 5.797e-06 0.00% Castro::post_regrid() 1 1.896e-06 3.294e-06 5.249e-06 0.00% Castro::computeInitialDt() 2 3.897e-06 4.231e-06 4.857e-06 0.00% Amr::init() 1 1.802e-06 2.199e-06 2.935e-06 0.00% Castro::FluxRegFineAdd() 10 2.001e-06 2.327e-06 2.875e-06 0.00% Amr::initialInit() 1 1.214e-06 1.606e-06 2.134e-06 0.00% DistributionMapping::Distribute() 1 8.8e-07 1.108e-06 1.375e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.66 3.662 3.662 100.00% Amr::coarseTimeStep() 10 3.417 3.417 3.417 93.31% Amr::timeStep() 10 3.408 3.408 3.408 93.06% Castro::advance() 10 3.391 3.392 3.392 92.62% Castro::subcycle_advance_ctu() 10 3.317 3.319 3.325 90.79% Castro::do_advance_ctu() 10 3.317 3.319 3.325 90.78% Castro::construct_ctu_hydro_source() 10 2.117 2.387 2.479 67.70% Gravity::make_radial_gravity() 21 0.3387 0.3543 0.3751 10.24% Gravity::get_new_grav_vector() 11 0.2291 0.2332 0.2362 6.45% Amr::init() 1 0.2295 0.2296 0.2297 6.27% Castro::construct_old_gravity() 10 0.1989 0.2117 0.2291 6.26% Gravity::get_old_grav_vector() 10 0.1979 0.2109 0.2284 6.24% Amr::initialInit() 1 0.216 0.2163 0.2165 5.91% Castro::construct_new_gravity() 10 0.2008 0.2046 0.2069 5.65% FillPatchIterator::Initialize 41 0.178 0.1861 0.1945 5.31% Amr::InitializeInit() 1 0.05567 0.1096 0.1837 5.01% Amr::defBaseLevel() 1 0.05567 0.1096 0.1837 5.01% Castro::initialize_do_advance() 10 0.1582 0.1711 0.1795 4.90% FillPatchSingleLevel 41 0.1281 0.1419 0.1661 4.54% Castro::initData() 1 0.04229 0.09447 0.1649 4.50% Amr::FinalizeInit() 1 0.0326 0.1066 0.1605 4.38% Castro::estTimeStep() 21 0.02607 0.1006 0.1566 4.28% Castro::computeInitialDt() 2 0.002029 0.07617 0.1302 3.56% Castro::expand_state() 10 0.1158 0.1232 0.13 3.55% FabArray::ParallelCopy() 41 0.08456 0.09957 0.1297 3.54% Castro::clean_state() 62 0.1165 0.1191 0.1219 3.33% FabArray::ParallelCopy_finish() 41 0.03692 0.05543 0.09993 2.73% Castro::initialize_advance() 10 0.06679 0.07272 0.07482 2.04% FabArray::setVal() 143 0.06731 0.07098 0.07366 2.01% Castro::computeTemp() 63 0.06825 0.07104 0.07355 2.01% Castro::do_new_sources() 10 0.06345 0.06505 0.06655 1.82% Castro::reset_internal_energy(MultiFab) 63 0.04995 0.05154 0.05329 1.46% Castro::reset_internal_energy(Fab) 1008 0.04964 0.05123 0.05298 1.45% Castro::do_old_sources() 10 0.03794 0.04698 0.05063 1.38% FabArray::ParallelCopy_nowait() 41 0.02966 0.04406 0.04958 1.35% StateDataPhysBCFunct::() 41 0.03513 0.04222 0.0464 1.27% StateData::FillBoundary(geom) 41 0.03501 0.04208 0.04614 1.26% Castro::normalize_species() 62 0.04124 0.04209 0.04325 1.18% Castro::construct_new_source() 50 0.02911 0.03036 0.03126 0.85% Castro::post_init() 1 0.02864 0.02944 0.02989 0.82% Gravity::interpolate_monopole_grav() 21 0.02691 0.02768 0.028 0.76% Castro::construct_new_gravity_source() 10 0.02327 0.0237 0.02419 0.66% Amr::writePlotFile() 2 0.02291 0.02308 0.02335 0.64% Castro::apply_source_to_state() 20 0.01149 0.01496 0.01674 0.46% MultiFab::Saxpy() 20 0.01145 0.01491 0.01668 0.46% Castro::post_timestep() 10 0.01578 0.016 0.01624 0.44% VisMF::Write(FabArray) 2 0.01036 0.01148 0.01511 0.41% FabArray::setDomainBndry() 41 0.005143 0.01076 0.01276 0.35% Castro::check_for_nan() 20 0.01033 0.01122 0.01253 0.34% MultiFab::contains_nan() 20 0.0103 0.01119 0.01251 0.34% Castro::construct_old_source() 50 0.006856 0.01075 0.01232 0.34% Castro::construct_old_gravity_source() 10 0.00682 0.01068 0.01225 0.33% Castro::Castro() 1 0.008656 0.00983 0.01208 0.33% Castro::initMFs() 1 0.005307 0.006321 0.00838 0.23% Castro::enforce_min_density() 62 0.006546 0.006878 0.007244 0.20% Castro::computeNewDt() 9 0.006983 0.006998 0.00701 0.19% AmrLevel::AmrLevel(dm) 1 0.004492 0.00518 0.006601 0.18% StateData::define() 4 0.004475 0.005162 0.006582 0.18% Castro::swap_state_time_levels() 10 0.003012 0.003923 0.00419 0.11% Castro::post_regrid() 1 0.001597 0.001948 0.002924 0.08% Castro::buildMetrics() 1 0.001383 0.001623 0.0021 0.06% Castro::finalize_do_advance() 10 0.0009926 0.001213 0.001328 0.04% Amr::InitAmr() 1 0.0002624 0.0003371 0.0004502 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.416e-05 0.0001412 0.0002244 0.01% DistributionMapping::LeastUsedCPUs() 1 7.931e-06 0.0001354 0.0002175 0.01% Castro::enforce_consistent_e() 1 8.48e-05 0.0001059 0.0001457 0.00% FabArrayBase::getCPC() 41 7.971e-05 8.486e-05 9.051e-05 0.00% Castro::finalize_advance() 10 5.945e-05 6.619e-05 7.165e-05 0.00% Amr::writeSmallPlotFile() 1 3.033e-05 6.195e-05 7.096e-05 0.00% Castro::enforce_speed_limit() 62 2.905e-05 3.123e-05 3.422e-05 0.00% FabArrayBase::CPC::define() 2 2.406e-05 2.631e-05 3.041e-05 0.00% Gravity::swapTimeLevels() 10 8.461e-06 1.296e-05 1.503e-05 0.00% Castro::create_source_corrector() 10 6.887e-06 1.053e-05 1.442e-05 0.00% Amr::initSubcycle() 1 7.711e-06 1.063e-05 1.382e-05 0.00% Castro::FluxRegCrseInit 10 6.736e-06 9.581e-06 1.283e-05 0.00% Gravity::set_mass_offset() 10 7.765e-06 9.563e-06 1.112e-05 0.00% Castro::retry_advance_ctu() 10 5.286e-06 6.314e-06 7.766e-06 0.00% Castro::FluxRegFineAdd() 10 2.001e-06 2.327e-06 2.875e-06 0.00% DistributionMapping::Distribute() 1 8.8e-07 1.108e-06 1.375e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.07-4-gcbdc6580ee3d) finalized