MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.07-9-g40b3d2176b17) initialized Starting run at 05:38:12 UTC on 2022-07-14. Successfully read inputs file ... Castro git describe: 22.07-4-g31cce7d5a AMReX git describe: 22.07-9-g40b3d2176 Microphysics git describe: 22.07-10-g6c6c6fcd reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015840827 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.35714317 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.34283645 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.337870137 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.338710419 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.34025958 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.342271253 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.334864302 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.335661594 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.33488299 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.33733099 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009790074 seconds Ending run at 05:38:16 UTC on 2022-07-14. Run time = 3.593538934 Run time without initialization = 3.418295281 Average number of zones advanced per microsecond: 0.767 Average number of zones advanced per microsecond per rank: 0.096 TinyProfiler total time across processes [min...avg...max]: 3.591 ... 3.593 ... 3.594 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0476 2.3615 2.4770 68.93% Castro::do_advance_ctu() 10 0.03547 0.1514 0.4697 13.07% Gravity::make_radial_gravity() 21 0.3458 0.3607 0.381 10.60% Castro::initData() 1 0.03814 0.07765 0.1133 3.15% FabArray::ParallelCopy_finish() 41 0.03851 0.05965 0.1117 3.11% Castro::estTimeStep() 21 0.02024 0.06049 0.1115 3.10% FabArray::setVal() 143 0.06025 0.06701 0.06992 1.95% Castro::reset_internal_energy(Fab) 1008 0.04558 0.04999 0.05276 1.47% FabArray::ParallelCopy_nowait() 41 0.02741 0.04364 0.04992 1.39% StateData::FillBoundary(geom) 41 0.03687 0.04227 0.04681 1.30% Castro::normalize_species() 62 0.03955 0.04129 0.04198 1.17% FillPatchIterator::Initialize 41 0.02223 0.03335 0.03731 1.04% Gravity::interpolate_monopole_grav() 21 0.02569 0.02737 0.02793 0.78% Castro::construct_new_gravity_source() 10 0.01881 0.02175 0.02291 0.64% Castro::expand_state() 10 0.01042 0.01783 0.02143 0.60% Castro::computeTemp() 63 0.01742 0.01906 0.01997 0.56% Castro::initialize_do_advance() 10 0.01043 0.01647 0.01878 0.52% MultiFab::Saxpy() 20 0.008911 0.01406 0.01694 0.47% VisMF::Write(FabArray) 2 0.01102 0.01226 0.01659 0.46% Amr::writePlotFile() 2 0.009275 0.01366 0.01496 0.42% MultiFab::contains_nan() 20 0.009747 0.01104 0.01287 0.36% FabArray::setDomainBndry() 41 0.005064 0.01039 0.01261 0.35% Gravity::get_new_grav_vector() 11 0.007513 0.01096 0.01261 0.35% Castro::construct_old_gravity_source() 10 0.00514 0.00968 0.01145 0.32% Castro::initialize_advance() 10 0.01074 0.01092 0.01121 0.31% Gravity::get_old_grav_vector() 10 0.005551 0.009009 0.01036 0.29% Castro::construct_new_source() 50 0.004766 0.006355 0.007211 0.20% Castro::enforce_min_density() 62 0.005977 0.006621 0.007007 0.19% Castro::initMFs() 1 0.005554 0.006083 0.006835 0.19% main() 1 0.003245 0.005111 0.005938 0.17% StateData::define() 4 0.004608 0.004846 0.005186 0.14% Castro::swap_state_time_levels() 10 0.002911 0.003881 0.004208 0.12% Amr::coarseTimeStep() 10 0.001038 0.001724 0.003507 0.10% Castro::buildMetrics() 1 0.001296 0.001396 0.001621 0.05% Castro::finalize_do_advance() 10 0.0006392 0.000939 0.001125 0.03% Amr::timeStep() 10 0.0001735 0.0002341 0.0005301 0.01% Amr::InitAmr() 1 0.0002661 0.0002938 0.0004316 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002798 0.0003164 0.0003494 0.01% StateDataPhysBCFunct::() 41 0.0001077 0.0001397 0.0001872 0.01% Castro::clean_state() 62 0.0001284 0.0001507 0.0001811 0.01% DistributionMapping::LeastUsedCPUs() 1 7.83e-06 0.0001536 0.0001802 0.01% Castro::enforce_consistent_e() 1 7.503e-05 8.775e-05 0.0001059 0.00% FabArray::ParallelCopy() 41 6.17e-05 8.524e-05 9.823e-05 0.00% Castro::Castro() 1 5.103e-05 7.173e-05 8.857e-05 0.00% Amr::FinalizeInit() 1 4.11e-06 1.514e-05 8.769e-05 0.00% Castro::construct_old_source() 50 2.929e-05 6.684e-05 8.222e-05 0.00% Castro::finalize_advance() 10 5.352e-05 6.477e-05 7.972e-05 0.00% Castro::do_new_sources() 10 3.824e-05 6.463e-05 7.856e-05 0.00% FillPatchSingleLevel 41 4.909e-05 6.521e-05 7.43e-05 0.00% Castro::apply_source_to_state() 20 3.713e-05 5.509e-05 7.404e-05 0.00% Castro::do_old_sources() 10 3.647e-05 6.201e-05 7.397e-05 0.00% Amr::writeSmallPlotFile() 1 3.127e-05 6.016e-05 6.996e-05 0.00% Castro::construct_old_gravity() 10 3.161e-05 5.115e-05 6.681e-05 0.00% FabArrayBase::getCPC() 41 5.572e-05 5.938e-05 6.413e-05 0.00% Castro::subcycle_advance_ctu() 10 3.104e-05 4.572e-05 6.012e-05 0.00% Castro::advance() 10 2.841e-05 4.396e-05 5.784e-05 0.00% Castro::construct_new_gravity() 10 3.486e-05 4.563e-05 5.298e-05 0.00% Castro::enforce_speed_limit() 62 2.514e-05 3.076e-05 3.507e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.735e-05 2.337e-05 3.165e-05 0.00% FabArrayBase::CPC::define() 2 2.224e-05 2.574e-05 3.15e-05 0.00% Castro::check_for_nan() 20 1.63e-05 2.249e-05 2.785e-05 0.00% Amr::defBaseLevel() 1 1.675e-05 1.999e-05 2.245e-05 0.00% Castro::FluxRegCrseInit 10 7.539e-06 1.454e-05 2.133e-05 0.00% Gravity::swapTimeLevels() 10 8.454e-06 1.275e-05 1.623e-05 0.00% Castro::post_timestep() 10 1.078e-05 1.276e-05 1.501e-05 0.00% Castro::retry_advance_ctu() 10 4.711e-06 7.267e-06 1.223e-05 0.00% Castro::computeNewDt() 9 6.254e-06 8.848e-06 1.187e-05 0.00% Castro::create_source_corrector() 10 5.994e-06 9.89e-06 1.17e-05 0.00% Gravity::set_mass_offset() 10 6.897e-06 9.466e-06 1.107e-05 0.00% Amr::initSubcycle() 1 8.241e-06 9.153e-06 9.824e-06 0.00% Castro::post_init() 1 2.691e-06 4.186e-06 9.294e-06 0.00% Amr::initialInit() 1 1.261e-06 2.411e-06 8.043e-06 0.00% Amr::InitializeInit() 1 1.88e-06 4.652e-06 7.269e-06 0.00% Amr::init() 1 1.78e-06 2.91e-06 6.928e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.871e-06 5.216e-06 6.634e-06 0.00% Castro::computeInitialDt() 2 3.758e-06 4.425e-06 5.236e-06 0.00% Castro::post_regrid() 1 1.687e-06 2.646e-06 4.888e-06 0.00% Castro::FluxRegFineAdd() 10 2.06e-06 2.556e-06 3.246e-06 0.00% DistributionMapping::Distribute() 1 9.11e-07 1.176e-06 1.305e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.591 3.593 3.594 100.00% Amr::coarseTimeStep() 10 3.403 3.403 3.403 94.68% Amr::timeStep() 10 3.39 3.392 3.393 94.42% Castro::advance() 10 3.376 3.376 3.376 93.96% Castro::subcycle_advance_ctu() 10 3.303 3.304 3.306 91.99% Castro::do_advance_ctu() 10 3.303 3.304 3.306 91.99% Castro::construct_ctu_hydro_source() 10 2.048 2.361 2.477 68.93% Gravity::make_radial_gravity() 21 0.3458 0.3607 0.381 10.60% Castro::construct_old_gravity() 10 0.2097 0.222 0.2358 6.56% Gravity::get_old_grav_vector() 10 0.2089 0.2213 0.2352 6.55% Gravity::get_new_grav_vector() 11 0.2263 0.2279 0.2292 6.38% FillPatchIterator::Initialize 41 0.1782 0.1897 0.2053 5.71% Castro::construct_new_gravity() 10 0.2024 0.2039 0.2052 5.71% Castro::initialize_do_advance() 10 0.1574 0.1704 0.1797 5.00% FillPatchSingleLevel 41 0.1292 0.1459 0.178 4.95% Amr::init() 1 0.1747 0.1748 0.1749 4.87% Amr::initialInit() 1 0.1586 0.1588 0.1589 4.42% FabArray::ParallelCopy() 41 0.08763 0.1035 0.1396 3.88% Amr::InitializeInit() 1 0.05765 0.09651 0.1318 3.67% Amr::defBaseLevel() 1 0.05765 0.09651 0.1317 3.67% Castro::expand_state() 10 0.1182 0.1235 0.131 3.65% Castro::clean_state() 62 0.1084 0.1165 0.1207 3.36% Castro::initData() 1 0.04165 0.08158 0.1175 3.27% FabArray::ParallelCopy_finish() 41 0.03851 0.05965 0.1117 3.11% Castro::estTimeStep() 21 0.02024 0.06049 0.1115 3.10% Amr::FinalizeInit() 1 0.02689 0.06226 0.101 2.81% Castro::computeInitialDt() 2 0.002084 0.0373 0.07617 2.12% Castro::initialize_advance() 10 0.07 0.07158 0.07254 2.02% Castro::computeTemp() 63 0.06356 0.06937 0.07244 2.02% FabArray::setVal() 143 0.06025 0.06701 0.06992 1.95% Castro::do_new_sources() 10 0.05079 0.06056 0.06433 1.79% Castro::reset_internal_energy(MultiFab) 63 0.04586 0.05031 0.0531 1.48% Castro::reset_internal_energy(Fab) 1008 0.04558 0.04999 0.05276 1.47% FabArray::ParallelCopy_nowait() 41 0.0275 0.04373 0.05 1.39% Castro::do_old_sources() 10 0.0326 0.04413 0.04878 1.36% StateDataPhysBCFunct::() 41 0.03703 0.04241 0.04696 1.31% StateData::FillBoundary(geom) 41 0.03687 0.04227 0.04681 1.30% Castro::normalize_species() 62 0.03955 0.04129 0.04198 1.17% Castro::construct_new_source() 50 0.02358 0.0281 0.03013 0.84% Gravity::interpolate_monopole_grav() 21 0.02569 0.02737 0.02793 0.78% Amr::writePlotFile() 2 0.0258 0.02593 0.02609 0.73% Castro::post_init() 1 0.0245 0.02466 0.02483 0.69% Castro::construct_new_gravity_source() 10 0.01881 0.02175 0.02291 0.64% Castro::apply_source_to_state() 20 0.008949 0.01411 0.01701 0.47% MultiFab::Saxpy() 20 0.008911 0.01406 0.01694 0.47% VisMF::Write(FabArray) 2 0.01102 0.01226 0.01659 0.46% Castro::post_timestep() 10 0.01449 0.0159 0.01652 0.46% Castro::check_for_nan() 20 0.009764 0.01106 0.01289 0.36% MultiFab::contains_nan() 20 0.009747 0.01104 0.01287 0.36% FabArray::setDomainBndry() 41 0.005064 0.01039 0.01261 0.35% Castro::construct_old_source() 50 0.00517 0.009747 0.01154 0.32% Castro::construct_old_gravity_source() 10 0.00514 0.00968 0.01145 0.32% Castro::Castro() 1 0.009149 0.00988 0.01073 0.30% Castro::computeNewDt() 9 0.007273 0.00728 0.007286 0.20% Castro::enforce_min_density() 62 0.005977 0.006621 0.007007 0.19% Castro::initMFs() 1 0.005554 0.006083 0.006835 0.19% AmrLevel::AmrLevel(dm) 1 0.004627 0.00487 0.005215 0.15% StateData::define() 4 0.004608 0.004846 0.005186 0.14% Castro::swap_state_time_levels() 10 0.002911 0.003881 0.004208 0.12% Castro::buildMetrics() 1 0.001414 0.001525 0.001769 0.05% Castro::post_regrid() 1 0.001521 0.001595 0.001663 0.05% Castro::finalize_do_advance() 10 0.0006392 0.000939 0.001125 0.03% Amr::InitAmr() 1 0.0002753 0.0003029 0.0004413 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.319e-05 0.00016 0.0001878 0.01% DistributionMapping::LeastUsedCPUs() 1 7.83e-06 0.0001536 0.0001802 0.01% Castro::enforce_consistent_e() 1 7.503e-05 8.775e-05 0.0001059 0.00% Castro::finalize_advance() 10 6.368e-05 8.187e-05 9.944e-05 0.00% FabArrayBase::getCPC() 41 8.002e-05 8.512e-05 9.331e-05 0.00% Amr::writeSmallPlotFile() 1 3.127e-05 6.016e-05 6.996e-05 0.00% Castro::enforce_speed_limit() 62 2.514e-05 3.076e-05 3.507e-05 0.00% FabArrayBase::CPC::define() 2 2.224e-05 2.574e-05 3.15e-05 0.00% Castro::FluxRegCrseInit 10 7.539e-06 1.454e-05 2.133e-05 0.00% Gravity::swapTimeLevels() 10 8.454e-06 1.275e-05 1.623e-05 0.00% Castro::retry_advance_ctu() 10 4.711e-06 7.267e-06 1.223e-05 0.00% Castro::create_source_corrector() 10 5.994e-06 9.89e-06 1.17e-05 0.00% Gravity::set_mass_offset() 10 6.897e-06 9.466e-06 1.107e-05 0.00% Amr::initSubcycle() 1 8.241e-06 9.153e-06 9.824e-06 0.00% Castro::FluxRegFineAdd() 10 2.06e-06 2.556e-06 3.246e-06 0.00% DistributionMapping::Distribute() 1 9.11e-07 1.176e-06 1.305e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.07-9-g40b3d2176b17) finalized