MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.07-11-gb673d81723c5) initialized Starting run at 13:31:12 UTC on 2022-07-19. Successfully read inputs file ... Castro git describe: 22.07-9-g478c03124 AMReX git describe: 22.07-11-gb673d8172 Microphysics git describe: 22.07-13-g29a6e0f1 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014514061 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.357834483 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.338667952 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.338594872 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.338046097 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.346695851 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.34268507 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.335311838 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.33449803 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.33596506 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.335018136 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009566558 seconds Ending run at 13:31:15 UTC on 2022-07-19. Run time = 3.61563567 Run time without initialization = 3.418821488 Average number of zones advanced per microsecond: 0.767 Average number of zones advanced per microsecond per rank: 0.096 TinyProfiler total time across processes [min...avg...max]: 3.614 ... 3.615 ... 3.616 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0610 2.3597 2.4807 68.61% Castro::do_advance_ctu() 10 0.03456 0.1598 0.4618 12.77% Gravity::make_radial_gravity() 21 0.3386 0.3555 0.3836 10.61% Castro::initData() 1 0.04525 0.08171 0.1308 3.62% FabArray::ParallelCopy_finish() 41 0.04021 0.05897 0.1201 3.32% Castro::estTimeStep() 21 0.02825 0.0796 0.1119 3.10% FabArray::setVal() 143 0.05898 0.06877 0.07239 2.00% Castro::reset_internal_energy(Fab) 1008 0.04532 0.04908 0.05207 1.44% FabArray::ParallelCopy_nowait() 41 0.02572 0.04315 0.04939 1.37% StateData::FillBoundary(geom) 41 0.03553 0.04238 0.04771 1.32% Castro::normalize_species() 62 0.03876 0.04159 0.04326 1.20% FillPatchIterator::Initialize 41 0.02114 0.03278 0.03699 1.02% Gravity::interpolate_monopole_grav() 21 0.02543 0.02725 0.0284 0.79% Castro::construct_new_gravity_source() 10 0.0193 0.02275 0.02352 0.65% Castro::expand_state() 10 0.009757 0.01843 0.02205 0.61% Castro::computeTemp() 63 0.01685 0.01877 0.02038 0.56% Castro::initialize_do_advance() 10 0.009092 0.01647 0.01851 0.51% MultiFab::Saxpy() 20 0.008559 0.01425 0.01633 0.45% VisMF::Write(FabArray) 2 0.01101 0.01216 0.01468 0.41% Amr::writePlotFile() 2 0.009606 0.01231 0.01338 0.37% Gravity::get_new_grav_vector() 11 0.007074 0.01096 0.01276 0.35% MultiFab::contains_nan() 20 0.0093 0.01099 0.01275 0.35% FabArray::setDomainBndry() 41 0.004778 0.01028 0.01229 0.34% Castro::construct_old_gravity_source() 10 0.004912 0.01005 0.01188 0.33% Gravity::get_old_grav_vector() 10 0.005423 0.009201 0.01088 0.30% Castro::initialize_advance() 10 0.006361 0.009835 0.01049 0.29% Castro::construct_new_source() 50 0.004699 0.006487 0.007229 0.20% Castro::enforce_min_density() 62 0.005086 0.005977 0.006657 0.18% Castro::initMFs() 1 0.005661 0.006026 0.006317 0.17% main() 1 0.003639 0.005003 0.005301 0.15% StateData::define() 4 0.004489 0.004823 0.00506 0.14% Castro::swap_state_time_levels() 10 0.003083 0.003719 0.004245 0.12% Amr::coarseTimeStep() 10 0.0007634 0.001711 0.002959 0.08% Castro::buildMetrics() 1 0.001285 0.001385 0.00147 0.04% Castro::finalize_do_advance() 10 0.000531 0.001079 0.001265 0.03% Amr::timeStep() 10 0.000172 0.0002363 0.0005448 0.02% Amr::InitAmr() 1 0.0002604 0.0003004 0.0004271 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002666 0.0002922 0.0003058 0.01% DistributionMapping::LeastUsedCPUs() 1 8.135e-06 0.0001515 0.0001982 0.01% Castro::clean_state() 62 0.0001366 0.0001545 0.0001785 0.00% StateDataPhysBCFunct::() 41 0.0001032 0.0001334 0.0001504 0.00% FabArray::ParallelCopy() 41 6.887e-05 9.231e-05 0.0001085 0.00% Castro::construct_old_source() 50 3.047e-05 7.25e-05 9.716e-05 0.00% Castro::enforce_consistent_e() 1 8.026e-05 8.703e-05 9.668e-05 0.00% Castro::Castro() 1 5.902e-05 7.354e-05 9.37e-05 0.00% Castro::do_old_sources() 10 4.159e-05 6.905e-05 8.815e-05 0.00% Castro::do_new_sources() 10 4.487e-05 6.939e-05 8.673e-05 0.00% FillPatchSingleLevel 41 6.148e-05 6.836e-05 7.987e-05 0.00% Castro::apply_source_to_state() 20 3.603e-05 4.895e-05 7.89e-05 0.00% Amr::writeSmallPlotFile() 1 2.908e-05 5.138e-05 7.35e-05 0.00% Amr::FinalizeInit() 1 3.605e-06 1.295e-05 7.328e-05 0.00% FabArrayBase::getCPC() 41 5.419e-05 6.319e-05 7.15e-05 0.00% Castro::advance() 10 3.551e-05 4.461e-05 6.231e-05 0.00% Castro::construct_old_gravity() 10 3.8e-05 5.15e-05 6.178e-05 0.00% Castro::construct_new_gravity() 10 3.691e-05 4.632e-05 5.557e-05 0.00% Castro::finalize_advance() 10 4.69e-05 5.076e-05 5.465e-05 0.00% Castro::subcycle_advance_ctu() 10 4.164e-05 4.703e-05 5.359e-05 0.00% Castro::enforce_speed_limit() 62 2.434e-05 2.989e-05 3.871e-05 0.00% FabArrayBase::CPC::define() 2 2.149e-05 2.571e-05 3.502e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.175e-05 1.978e-05 3.318e-05 0.00% Castro::check_for_nan() 20 1.976e-05 2.283e-05 2.763e-05 0.00% Amr::defBaseLevel() 1 1.782e-05 2.091e-05 2.596e-05 0.00% Gravity::swapTimeLevels() 10 5.506e-06 1.301e-05 1.649e-05 0.00% Castro::post_timestep() 10 1.111e-05 1.327e-05 1.641e-05 0.00% Amr::InitializeInit() 1 2.075e-06 5.096e-06 1.419e-05 0.00% Castro::create_source_corrector() 10 6.015e-06 1.067e-05 1.322e-05 0.00% Castro::FluxRegCrseInit 10 6.439e-06 9.746e-06 1.285e-05 0.00% Gravity::set_mass_offset() 10 6.124e-06 8.86e-06 1.142e-05 0.00% Castro::computeNewDt() 9 6.428e-06 8.602e-06 1.034e-05 0.00% Amr::initSubcycle() 1 8.117e-06 8.934e-06 9.355e-06 0.00% Castro::retry_advance_ctu() 10 4.451e-06 6.402e-06 7.521e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.835e-06 4.175e-06 5.001e-06 0.00% Castro::computeInitialDt() 2 2.98e-06 3.85e-06 4.91e-06 0.00% Castro::post_regrid() 1 1.681e-06 2.989e-06 4.567e-06 0.00% Castro::post_init() 1 2.94e-06 3.344e-06 4.024e-06 0.00% Castro::FluxRegFineAdd() 10 2.095e-06 2.419e-06 3.02e-06 0.00% Amr::init() 1 1.636e-06 2.173e-06 2.667e-06 0.00% Amr::initialInit() 1 1.359e-06 1.615e-06 1.98e-06 0.00% DistributionMapping::Distribute() 1 9.52e-07 1.028e-06 1.094e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.614 3.615 3.616 100.00% Amr::coarseTimeStep() 10 3.404 3.404 3.404 94.15% Amr::timeStep() 10 3.393 3.394 3.395 93.90% Castro::advance() 10 3.378 3.379 3.379 93.45% Castro::subcycle_advance_ctu() 10 3.305 3.308 3.316 91.72% Castro::do_advance_ctu() 10 3.305 3.308 3.316 91.72% Castro::construct_ctu_hydro_source() 10 2.061 2.36 2.481 68.61% Gravity::make_radial_gravity() 21 0.3386 0.3555 0.3836 10.61% Castro::construct_old_gravity() 10 0.2008 0.2131 0.2346 6.49% Gravity::get_old_grav_vector() 10 0.1999 0.2123 0.234 6.47% Gravity::get_new_grav_vector() 11 0.2296 0.2306 0.2316 6.41% FillPatchIterator::Initialize 41 0.1788 0.1879 0.2076 5.74% Castro::construct_new_gravity() 10 0.202 0.203 0.2041 5.65% Amr::init() 1 0.1962 0.1964 0.1964 5.43% FillPatchSingleLevel 41 0.1307 0.1449 0.1817 5.02% Amr::initialInit() 1 0.1813 0.1815 0.1817 5.02% Castro::initialize_do_advance() 10 0.1577 0.1699 0.1777 4.91% Amr::InitializeInit() 1 0.06531 0.1009 0.1508 4.17% Amr::defBaseLevel() 1 0.06531 0.1008 0.1508 4.17% FabArray::ParallelCopy() 41 0.08744 0.1023 0.146 4.04% Castro::initData() 1 0.04968 0.08584 0.135 3.73% Castro::expand_state() 10 0.1171 0.1234 0.1288 3.56% Castro::clean_state() 62 0.1062 0.1149 0.1209 3.35% FabArray::ParallelCopy_finish() 41 0.04021 0.05897 0.1201 3.32% Amr::FinalizeInit() 1 0.03068 0.08068 0.1163 3.22% Castro::estTimeStep() 21 0.02825 0.0796 0.1119 3.10% Castro::computeInitialDt() 2 0.001819 0.05174 0.08728 2.41% Castro::initialize_advance() 10 0.06182 0.07022 0.07317 2.02% Castro::computeTemp() 63 0.06244 0.06814 0.07275 2.01% FabArray::setVal() 143 0.05898 0.06877 0.07239 2.00% Castro::do_new_sources() 10 0.05167 0.06259 0.06491 1.80% Castro::reset_internal_energy(MultiFab) 63 0.04559 0.04937 0.05237 1.45% Castro::reset_internal_energy(Fab) 1008 0.04532 0.04908 0.05207 1.44% FabArray::ParallelCopy_nowait() 41 0.02581 0.04324 0.04947 1.37% Castro::do_old_sources() 10 0.03181 0.04486 0.04931 1.36% StateDataPhysBCFunct::() 41 0.03564 0.04251 0.04786 1.32% StateData::FillBoundary(geom) 41 0.03553 0.04238 0.04771 1.32% Castro::normalize_species() 62 0.03876 0.04159 0.04326 1.20% Castro::construct_new_source() 50 0.024 0.02924 0.03042 0.84% Castro::post_init() 1 0.02808 0.02828 0.02851 0.79% Gravity::interpolate_monopole_grav() 21 0.02543 0.02725 0.0284 0.79% Amr::writePlotFile() 2 0.02429 0.02447 0.02473 0.68% Castro::construct_new_gravity_source() 10 0.0193 0.02275 0.02352 0.65% Castro::apply_source_to_state() 20 0.008595 0.0143 0.01641 0.45% MultiFab::Saxpy() 20 0.008559 0.01425 0.01633 0.45% Castro::post_timestep() 10 0.01428 0.01544 0.01628 0.45% VisMF::Write(FabArray) 2 0.01101 0.01216 0.01468 0.41% Castro::check_for_nan() 20 0.009322 0.01102 0.01277 0.35% MultiFab::contains_nan() 20 0.0093 0.01099 0.01275 0.35% FabArray::setDomainBndry() 41 0.004778 0.01028 0.01229 0.34% Castro::construct_old_source() 50 0.004942 0.01012 0.01198 0.33% Castro::construct_old_gravity_source() 10 0.004912 0.01005 0.01188 0.33% Castro::Castro() 1 0.009076 0.009989 0.01056 0.29% Castro::computeNewDt() 9 0.006965 0.006973 0.006979 0.19% Castro::enforce_min_density() 62 0.005086 0.005977 0.006657 0.18% Castro::initMFs() 1 0.005661 0.006026 0.006317 0.17% AmrLevel::AmrLevel(dm) 1 0.004513 0.004843 0.005079 0.14% StateData::define() 4 0.004489 0.004823 0.00506 0.14% Castro::swap_state_time_levels() 10 0.003083 0.003719 0.004245 0.12% Castro::post_regrid() 1 0.001515 0.001676 0.001964 0.05% Castro::buildMetrics() 1 0.001396 0.001516 0.001615 0.04% Castro::finalize_do_advance() 10 0.000531 0.001079 0.001265 0.03% Amr::InitAmr() 1 0.0002692 0.0003094 0.0004363 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.315e-05 0.0001567 0.0002042 0.01% DistributionMapping::LeastUsedCPUs() 1 8.135e-06 0.0001515 0.0001982 0.01% Castro::enforce_consistent_e() 1 8.026e-05 8.703e-05 9.668e-05 0.00% FabArrayBase::getCPC() 41 7.963e-05 8.89e-05 9.632e-05 0.00% Amr::writeSmallPlotFile() 1 2.908e-05 5.138e-05 7.35e-05 0.00% Castro::finalize_advance() 10 5.633e-05 6.293e-05 6.864e-05 0.00% Castro::enforce_speed_limit() 62 2.434e-05 2.989e-05 3.871e-05 0.00% FabArrayBase::CPC::define() 2 2.149e-05 2.571e-05 3.502e-05 0.00% Gravity::swapTimeLevels() 10 5.506e-06 1.301e-05 1.649e-05 0.00% Castro::create_source_corrector() 10 6.015e-06 1.067e-05 1.322e-05 0.00% Castro::FluxRegCrseInit 10 6.439e-06 9.746e-06 1.285e-05 0.00% Gravity::set_mass_offset() 10 6.124e-06 8.86e-06 1.142e-05 0.00% Amr::initSubcycle() 1 8.117e-06 8.934e-06 9.355e-06 0.00% Castro::retry_advance_ctu() 10 4.451e-06 6.402e-06 7.521e-06 0.00% Castro::FluxRegFineAdd() 10 2.095e-06 2.419e-06 3.02e-06 0.00% DistributionMapping::Distribute() 1 9.52e-07 1.028e-06 1.094e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.07-11-gb673d81723c5) finalized