MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.07-11-gb673d81723c5) initialized Starting run at 05:38:04 UTC on 2022-07-19. Successfully read inputs file ... Castro git describe: 22.07-6-g8dff7e76c AMReX git describe: 22.07-11-gb673d8172 Microphysics git describe: 22.07-13-g29a6e0f1 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015835306 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.348714564 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.339554734 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.337181666 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.338051894 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.348069666 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.343090457 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.333563714 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.334913924 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.334755197 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.334592923 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009672306 seconds Ending run at 05:38:08 UTC on 2022-07-19. Run time = 3.596137692 Run time without initialization = 3.408645136 Average number of zones advanced per microsecond: 0.769 Average number of zones advanced per microsecond per rank: 0.096 TinyProfiler total time across processes [min...avg...max]: 3.594 ... 3.595 ... 3.596 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0717 2.3637 2.4725 68.75% Castro::do_advance_ctu() 10 0.03252 0.1422 0.4382 12.18% Gravity::make_radial_gravity() 21 0.35 0.3671 0.3969 11.04% FabArray::ParallelCopy_finish() 41 0.04067 0.05902 0.1187 3.30% Castro::initData() 1 0.03956 0.08435 0.1127 3.13% Castro::estTimeStep() 21 0.02696 0.05656 0.1023 2.85% FabArray::setVal() 143 0.05812 0.06807 0.07094 1.97% Castro::reset_internal_energy(Fab) 1008 0.04601 0.04981 0.05258 1.46% FabArray::ParallelCopy_nowait() 41 0.02512 0.04289 0.04909 1.36% StateData::FillBoundary(geom) 41 0.03385 0.04202 0.04718 1.31% Castro::normalize_species() 62 0.03908 0.04148 0.04318 1.20% FillPatchIterator::Initialize 41 0.02081 0.03329 0.03806 1.06% Gravity::interpolate_monopole_grav() 21 0.0261 0.02814 0.02911 0.81% Castro::construct_new_gravity_source() 10 0.01941 0.02276 0.02391 0.66% Castro::expand_state() 10 0.009608 0.01834 0.02216 0.62% Castro::computeTemp() 63 0.01735 0.01897 0.02054 0.57% Castro::initialize_do_advance() 10 0.008655 0.01643 0.0186 0.52% MultiFab::Saxpy() 20 0.008561 0.01419 0.01595 0.44% VisMF::Write(FabArray) 2 0.01122 0.01197 0.01445 0.40% Amr::writePlotFile() 2 0.01128 0.01255 0.01388 0.39% Gravity::get_new_grav_vector() 11 0.007181 0.01107 0.01332 0.37% MultiFab::contains_nan() 20 0.009858 0.01114 0.0125 0.35% FabArray::setDomainBndry() 41 0.004784 0.01027 0.01208 0.34% Castro::construct_old_gravity_source() 10 0.004991 0.009989 0.01155 0.32% Gravity::get_old_grav_vector() 10 0.00539 0.009306 0.01087 0.30% Castro::initialize_advance() 10 0.006841 0.009805 0.01039 0.29% Castro::initMFs() 1 0.005515 0.006427 0.009041 0.25% Castro::enforce_min_density() 62 0.005711 0.006618 0.007242 0.20% Castro::construct_new_source() 50 0.004691 0.006412 0.007048 0.20% StateData::define() 4 0.004554 0.005202 0.006802 0.19% main() 1 0.003236 0.005085 0.005778 0.16% Castro::swap_state_time_levels() 10 0.002605 0.003681 0.004349 0.12% Amr::coarseTimeStep() 10 0.0008897 0.001646 0.003352 0.09% Castro::buildMetrics() 1 0.0013 0.001474 0.001971 0.05% Castro::finalize_do_advance() 10 0.0005314 0.0009849 0.001145 0.03% Amr::timeStep() 10 0.0001758 0.0002342 0.0005233 0.01% Amr::InitAmr() 1 0.0002788 0.0003396 0.0004653 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002891 0.0003071 0.0003282 0.01% DistributionMapping::LeastUsedCPUs() 1 7.5e-06 0.0001486 0.0002152 0.01% Castro::clean_state() 62 0.0001218 0.0001506 0.0001655 0.00% StateDataPhysBCFunct::() 41 0.0001054 0.0001264 0.0001423 0.00% Castro::enforce_consistent_e() 1 7.834e-05 9.862e-05 0.000137 0.00% FabArray::ParallelCopy() 41 5.892e-05 8.177e-05 9.481e-05 0.00% Castro::do_old_sources() 10 3.648e-05 6.794e-05 9.093e-05 0.00% Castro::construct_old_source() 50 2.836e-05 6.81e-05 8.888e-05 0.00% Amr::FinalizeInit() 1 3.641e-06 1.527e-05 8.841e-05 0.00% Castro::do_new_sources() 10 4.205e-05 6.453e-05 7.884e-05 0.00% FillPatchSingleLevel 41 5.33e-05 6.376e-05 7.624e-05 0.00% Castro::apply_source_to_state() 20 3.406e-05 4.733e-05 7.389e-05 0.00% Castro::Castro() 1 5.97e-05 6.871e-05 7.347e-05 0.00% Amr::writeSmallPlotFile() 1 3.019e-05 5.476e-05 6.745e-05 0.00% Castro::construct_old_gravity() 10 3.233e-05 5.223e-05 6.739e-05 0.00% FabArrayBase::getCPC() 41 5.719e-05 6.07e-05 6.596e-05 0.00% Castro::construct_new_gravity() 10 3.208e-05 4.881e-05 6.366e-05 0.00% Castro::finalize_advance() 10 4.891e-05 5.338e-05 5.804e-05 0.00% Castro::subcycle_advance_ctu() 10 3.03e-05 4.322e-05 4.994e-05 0.00% Castro::advance() 10 3.172e-05 4.089e-05 4.971e-05 0.00% Castro::enforce_speed_limit() 62 2.894e-05 3.208e-05 3.418e-05 0.00% Amr::defBaseLevel() 1 1.761e-05 2.449e-05 3.335e-05 0.00% FabArrayBase::CPC::define() 2 2.226e-05 2.658e-05 3.022e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.535e-05 2.041e-05 2.656e-05 0.00% Castro::check_for_nan() 20 1.787e-05 2.078e-05 2.37e-05 0.00% Gravity::swapTimeLevels() 10 5.879e-06 1.233e-05 1.531e-05 0.00% Castro::post_init() 1 2.368e-06 4.894e-06 1.5e-05 0.00% Castro::post_timestep() 10 9.02e-06 1.242e-05 1.47e-05 0.00% Amr::initSubcycle() 1 7.975e-06 1.002e-05 1.431e-05 0.00% Castro::create_source_corrector() 10 6.101e-06 1.092e-05 1.406e-05 0.00% Gravity::set_mass_offset() 10 6.548e-06 9.478e-06 1.286e-05 0.00% Castro::FluxRegCrseInit 10 6.492e-06 9.533e-06 1.175e-05 0.00% Castro::computeNewDt() 9 7.178e-06 9.26e-06 1.13e-05 0.00% Castro::retry_advance_ctu() 10 4.855e-06 6.413e-06 7.714e-06 0.00% Amr::InitializeInit() 1 2.2e-06 3.55e-06 6.96e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.823e-06 4.949e-06 6.49e-06 0.00% Castro::computeInitialDt() 2 2.925e-06 4.333e-06 5.64e-06 0.00% Castro::post_regrid() 1 1.619e-06 2.939e-06 5.173e-06 0.00% Castro::FluxRegFineAdd() 10 1.989e-06 2.36e-06 2.963e-06 0.00% Amr::init() 1 2.048e-06 2.336e-06 2.797e-06 0.00% Amr::initialInit() 1 1.087e-06 1.543e-06 1.892e-06 0.00% DistributionMapping::Distribute() 1 9.13e-07 1.268e-06 1.604e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.594 3.595 3.596 100.00% Amr::coarseTimeStep() 10 3.393 3.393 3.393 94.36% Amr::timeStep() 10 3.382 3.383 3.384 94.10% Castro::advance() 10 3.367 3.367 3.367 93.63% Castro::subcycle_advance_ctu() 10 3.294 3.297 3.306 91.94% Castro::do_advance_ctu() 10 3.294 3.297 3.306 91.94% Castro::construct_ctu_hydro_source() 10 2.072 2.364 2.472 68.75% Gravity::make_radial_gravity() 21 0.35 0.3671 0.3969 11.04% Gravity::get_new_grav_vector() 11 0.2426 0.2444 0.2455 6.83% Castro::construct_old_gravity() 10 0.2028 0.215 0.2377 6.61% Gravity::get_old_grav_vector() 10 0.2018 0.2142 0.2372 6.60% Castro::construct_new_gravity() 10 0.205 0.2066 0.2082 5.79% FillPatchIterator::Initialize 41 0.1778 0.1878 0.2036 5.66% Amr::init() 1 0.1869 0.187 0.1871 5.20% FillPatchSingleLevel 41 0.1293 0.1443 0.178 4.95% Castro::initialize_do_advance() 10 0.1544 0.1675 0.1745 4.85% Amr::initialInit() 1 0.171 0.1722 0.1729 4.81% FabArray::ParallelCopy() 41 0.0877 0.1021 0.144 4.00% Amr::InitializeInit() 1 0.05752 0.1042 0.1309 3.64% Amr::defBaseLevel() 1 0.05752 0.1042 0.1309 3.64% Castro::expand_state() 10 0.1139 0.1211 0.1257 3.50% Castro::clean_state() 62 0.1077 0.1163 0.1221 3.39% FabArray::ParallelCopy_finish() 41 0.04067 0.05902 0.1187 3.30% Castro::initData() 1 0.04351 0.08857 0.1166 3.24% Amr::FinalizeInit() 1 0.04119 0.06802 0.1135 3.16% Castro::estTimeStep() 21 0.02696 0.05656 0.1023 2.85% Castro::computeInitialDt() 2 0.001694 0.02834 0.075 2.09% Castro::computeTemp() 63 0.06365 0.06909 0.07344 2.04% Castro::initialize_advance() 10 0.06022 0.06977 0.07308 2.03% FabArray::setVal() 143 0.05812 0.06807 0.07094 1.97% Castro::do_new_sources() 10 0.05239 0.06237 0.06452 1.79% Castro::reset_internal_energy(MultiFab) 63 0.0463 0.05012 0.0529 1.47% Castro::reset_internal_energy(Fab) 1008 0.04601 0.04981 0.05258 1.46% FabArray::ParallelCopy_nowait() 41 0.0252 0.04297 0.04918 1.37% Castro::do_old_sources() 10 0.03248 0.04488 0.04856 1.35% StateDataPhysBCFunct::() 41 0.03396 0.04215 0.04731 1.32% StateData::FillBoundary(geom) 41 0.03385 0.04202 0.04718 1.31% Castro::normalize_species() 62 0.03908 0.04148 0.04318 1.20% Castro::post_init() 1 0.03772 0.03868 0.03961 1.10% Castro::construct_new_source() 50 0.0241 0.02917 0.03048 0.85% Gravity::interpolate_monopole_grav() 21 0.0261 0.02814 0.02911 0.81% Amr::writePlotFile() 2 0.02369 0.02452 0.02573 0.72% Castro::construct_new_gravity_source() 10 0.01941 0.02276 0.02391 0.66% Castro::post_timestep() 10 0.01472 0.01606 0.01676 0.47% Castro::apply_source_to_state() 20 0.008595 0.01424 0.01602 0.45% MultiFab::Saxpy() 20 0.008561 0.01419 0.01595 0.44% VisMF::Write(FabArray) 2 0.01122 0.01197 0.01445 0.40% Castro::Castro() 1 0.009301 0.01025 0.01282 0.36% Castro::check_for_nan() 20 0.009877 0.01116 0.01252 0.35% MultiFab::contains_nan() 20 0.009858 0.01114 0.0125 0.35% FabArray::setDomainBndry() 41 0.004784 0.01027 0.01208 0.34% Castro::construct_old_source() 50 0.005019 0.01006 0.01164 0.32% Castro::construct_old_gravity_source() 10 0.004991 0.009989 0.01155 0.32% Castro::initMFs() 1 0.005515 0.006427 0.009041 0.25% Castro::computeNewDt() 9 0.007328 0.007333 0.007338 0.20% Castro::enforce_min_density() 62 0.005711 0.006618 0.007242 0.20% AmrLevel::AmrLevel(dm) 1 0.00457 0.005222 0.006822 0.19% StateData::define() 4 0.004554 0.005202 0.006802 0.19% Castro::swap_state_time_levels() 10 0.002605 0.003681 0.004349 0.12% Castro::post_regrid() 1 0.001507 0.001901 0.002971 0.08% Castro::buildMetrics() 1 0.00141 0.001617 0.002185 0.06% Castro::finalize_do_advance() 10 0.0005314 0.0009849 0.001145 0.03% Amr::InitAmr() 1 0.0002879 0.0003496 0.0004796 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.26e-05 0.0001548 0.0002233 0.01% DistributionMapping::LeastUsedCPUs() 1 7.5e-06 0.0001486 0.0002152 0.01% Castro::enforce_consistent_e() 1 7.834e-05 9.862e-05 0.000137 0.00% FabArrayBase::getCPC() 41 8.123e-05 8.729e-05 9.327e-05 0.00% Castro::finalize_advance() 10 5.749e-05 6.527e-05 7.027e-05 0.00% Amr::writeSmallPlotFile() 1 3.019e-05 5.476e-05 6.745e-05 0.00% Castro::enforce_speed_limit() 62 2.894e-05 3.208e-05 3.418e-05 0.00% FabArrayBase::CPC::define() 2 2.226e-05 2.658e-05 3.022e-05 0.00% Gravity::swapTimeLevels() 10 5.879e-06 1.233e-05 1.531e-05 0.00% Amr::initSubcycle() 1 7.975e-06 1.002e-05 1.431e-05 0.00% Castro::create_source_corrector() 10 6.101e-06 1.092e-05 1.406e-05 0.00% Gravity::set_mass_offset() 10 6.548e-06 9.478e-06 1.286e-05 0.00% Castro::FluxRegCrseInit 10 6.492e-06 9.533e-06 1.175e-05 0.00% Castro::retry_advance_ctu() 10 4.855e-06 6.413e-06 7.714e-06 0.00% Castro::FluxRegFineAdd() 10 1.989e-06 2.36e-06 2.963e-06 0.00% DistributionMapping::Distribute() 1 9.13e-07 1.268e-06 1.604e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.07-11-gb673d81723c5) finalized