MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.07-12-g8e40952af9ab) initialized Starting run at 05:37:43 UTC on 2022-07-21. Successfully read inputs file ... Castro git describe: 22.07-10-gf80c3f7eb AMReX git describe: 22.07-12-g8e40952af Microphysics git describe: 22.07-15-ga4952214 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014027159 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.35373458 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.351951071 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.352180033 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.355416901 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.353760089 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.347265075 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.337410551 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.336255373 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.337019232 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.335885115 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009899491 seconds Ending run at 05:37:47 UTC on 2022-07-21. Run time = 3.651580786 Run time without initialization = 3.477775807 Average number of zones advanced per microsecond: 0.754 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.649 ... 3.651 ... 3.652 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0282 2.4196 2.5192 68.99% Castro::do_advance_ctu() 10 0.03551 0.137 0.5322 14.57% Gravity::make_radial_gravity() 21 0.3428 0.3583 0.3882 10.63% FabArray::ParallelCopy_finish() 41 0.04202 0.05855 0.1176 3.22% Castro::initData() 1 0.03768 0.07781 0.1132 3.10% Castro::estTimeStep() 21 0.02772 0.06206 0.1006 2.75% FabArray::setVal() 143 0.06661 0.07086 0.07241 1.98% Castro::reset_internal_energy(Fab) 1008 0.04827 0.05023 0.05161 1.41% FabArray::ParallelCopy_nowait() 41 0.02746 0.046 0.05138 1.41% StateData::FillBoundary(geom) 41 0.03442 0.04297 0.04671 1.28% Castro::normalize_species() 62 0.03949 0.04158 0.04233 1.16% FillPatchIterator::Initialize 41 0.0198 0.03447 0.03864 1.06% Gravity::interpolate_monopole_grav() 21 0.02592 0.02732 0.02769 0.76% Castro::construct_new_gravity_source() 10 0.02003 0.02288 0.02368 0.65% Castro::expand_state() 10 0.009166 0.01947 0.02251 0.62% Castro::computeTemp() 63 0.01805 0.01929 0.0202 0.55% Castro::initialize_do_advance() 10 0.009051 0.01764 0.01976 0.54% MultiFab::Saxpy() 20 0.009736 0.01481 0.01672 0.46% VisMF::Write(FabArray) 2 0.01121 0.01208 0.01445 0.40% MultiFab::contains_nan() 20 0.01035 0.01137 0.01333 0.37% Gravity::get_new_grav_vector() 11 0.009802 0.01235 0.0133 0.36% Amr::writePlotFile() 2 0.009712 0.01221 0.01317 0.36% FabArray::setDomainBndry() 41 0.00454 0.01132 0.01315 0.36% Castro::construct_old_gravity_source() 10 0.005345 0.01057 0.01208 0.33% Gravity::get_old_grav_vector() 10 0.005705 0.01005 0.01144 0.31% Castro::initialize_advance() 10 0.0101 0.01038 0.01124 0.31% Castro::initMFs() 1 0.005612 0.005837 0.007266 0.20% Castro::construct_new_source() 50 0.004773 0.006642 0.007245 0.20% Castro::enforce_min_density() 62 0.005611 0.006181 0.006602 0.18% main() 1 0.003207 0.005709 0.006244 0.17% StateData::define() 4 0.004498 0.004626 0.00506 0.14% Castro::swap_state_time_levels() 10 0.003064 0.003939 0.004085 0.11% Amr::coarseTimeStep() 10 0.000863 0.00168 0.003558 0.10% Castro::finalize_do_advance() 10 0.0007809 0.001401 0.001713 0.05% Castro::buildMetrics() 1 0.00131 0.001357 0.001503 0.04% Amr::timeStep() 10 0.0001712 0.0002392 0.0004981 0.01% Amr::InitAmr() 1 0.0002571 0.0002831 0.0003755 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002815 0.0002941 0.0003032 0.01% Castro::clean_state() 62 0.0001657 0.0001825 0.0002139 0.01% DistributionMapping::LeastUsedCPUs() 1 6.673e-06 0.0001006 0.0001768 0.00% StateDataPhysBCFunct::() 41 0.0001079 0.0001348 0.0001524 0.00% Castro::enforce_consistent_e() 1 7.783e-05 8.864e-05 0.0001012 0.00% FabArray::ParallelCopy() 41 7.526e-05 8.911e-05 0.0001003 0.00% Castro::Castro() 1 5.954e-05 7.983e-05 9.413e-05 0.00% Castro::subcycle_advance_ctu() 10 3.545e-05 5.655e-05 8.853e-05 0.00% Castro::construct_old_source() 50 3.084e-05 7.283e-05 8.792e-05 0.00% Castro::do_new_sources() 10 5.011e-05 6.941e-05 8.314e-05 0.00% Amr::writeSmallPlotFile() 1 3.475e-05 6.534e-05 8.031e-05 0.00% Castro::do_old_sources() 10 3.966e-05 6.819e-05 7.888e-05 0.00% Amr::FinalizeInit() 1 3.984e-06 1.35e-05 7.556e-05 0.00% FillPatchSingleLevel 41 5.801e-05 6.669e-05 7.115e-05 0.00% Castro::construct_old_gravity() 10 4.456e-05 5.776e-05 6.801e-05 0.00% FabArrayBase::getCPC() 41 5.508e-05 6.085e-05 6.746e-05 0.00% Castro::apply_source_to_state() 20 3.469e-05 4.96e-05 6.122e-05 0.00% Castro::finalize_advance() 10 4.765e-05 5.307e-05 5.848e-05 0.00% Castro::construct_new_gravity() 10 3.749e-05 4.693e-05 5.382e-05 0.00% Castro::advance() 10 3.096e-05 4.362e-05 5.052e-05 0.00% Castro::enforce_speed_limit() 62 2.528e-05 3.294e-05 4.47e-05 0.00% FabArrayBase::CPC::define() 2 2.321e-05 2.813e-05 4.033e-05 0.00% Amr::defBaseLevel() 1 1.966e-05 2.506e-05 3.145e-05 0.00% Castro::check_for_nan() 20 1.825e-05 2.232e-05 2.657e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.059e-05 1.719e-05 2.467e-05 0.00% Castro::post_timestep() 10 1.235e-05 1.385e-05 1.691e-05 0.00% Gravity::swapTimeLevels() 10 9.017e-06 1.359e-05 1.663e-05 0.00% Castro::create_source_corrector() 10 8.571e-06 1.082e-05 1.492e-05 0.00% Gravity::set_mass_offset() 10 6.539e-06 9.599e-06 1.194e-05 0.00% Castro::FluxRegCrseInit 10 7.059e-06 9.246e-06 1.168e-05 0.00% Castro::computeNewDt() 9 8.303e-06 9.497e-06 1.066e-05 0.00% Amr::initSubcycle() 1 7.941e-06 8.385e-06 9.42e-06 0.00% Amr::InitializeInit() 1 2.102e-06 5.287e-06 8.934e-06 0.00% Castro::retry_advance_ctu() 10 4.142e-06 6.412e-06 7.857e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.481e-06 4.725e-06 6.559e-06 0.00% Castro::post_regrid() 1 1.531e-06 3.2e-06 5.259e-06 0.00% Castro::post_init() 1 2.701e-06 3.706e-06 4.989e-06 0.00% Castro::computeInitialDt() 2 3.702e-06 4.451e-06 4.891e-06 0.00% Castro::FluxRegFineAdd() 10 1.88e-06 2.344e-06 3.112e-06 0.00% Amr::init() 1 1.684e-06 2.091e-06 2.87e-06 0.00% Amr::initialInit() 1 1.152e-06 1.685e-06 2.387e-06 0.00% DistributionMapping::Distribute() 1 9.49e-07 1.043e-06 1.17e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.649 3.651 3.652 100.00% Amr::coarseTimeStep() 10 3.462 3.462 3.462 94.80% Amr::timeStep() 10 3.45 3.452 3.453 94.55% Castro::advance() 10 3.435 3.435 3.436 94.09% Castro::subcycle_advance_ctu() 10 3.363 3.364 3.368 92.23% Castro::do_advance_ctu() 10 3.363 3.364 3.368 92.23% Castro::construct_ctu_hydro_source() 10 2.028 2.42 2.519 68.99% Gravity::make_radial_gravity() 21 0.3428 0.3583 0.3882 10.63% Castro::construct_old_gravity() 10 0.2001 0.2144 0.2386 6.54% Gravity::get_new_grav_vector() 11 0.2323 0.2363 0.2384 6.53% Gravity::get_old_grav_vector() 10 0.1992 0.2136 0.238 6.52% Castro::construct_new_gravity() 10 0.2088 0.2124 0.2143 5.87% FillPatchIterator::Initialize 41 0.1859 0.1937 0.2042 5.59% Castro::initialize_do_advance() 10 0.1553 0.1758 0.185 5.07% FillPatchSingleLevel 41 0.1357 0.1479 0.1798 4.92% Amr::init() 1 0.1733 0.1734 0.1734 4.75% Amr::initialInit() 1 0.1589 0.1591 0.1593 4.36% FabArray::ParallelCopy() 41 0.09165 0.1047 0.1452 3.98% Castro::expand_state() 10 0.1192 0.1279 0.1351 3.70% Amr::InitializeInit() 1 0.0564 0.09672 0.132 3.62% Amr::defBaseLevel() 1 0.05639 0.09672 0.132 3.62% Castro::clean_state() 62 0.111 0.1169 0.1196 3.27% FabArray::ParallelCopy_finish() 41 0.04202 0.05855 0.1176 3.22% Castro::initData() 1 0.0418 0.08188 0.1174 3.22% Amr::FinalizeInit() 1 0.02697 0.06236 0.1027 2.81% Castro::estTimeStep() 21 0.02772 0.06206 0.1006 2.75% Castro::computeInitialDt() 2 0.001705 0.03701 0.07736 2.12% Castro::initialize_advance() 10 0.06687 0.07114 0.07271 1.99% FabArray::setVal() 143 0.06661 0.07086 0.07241 1.98% Castro::computeTemp() 63 0.06661 0.06982 0.0721 1.97% Castro::do_new_sources() 10 0.0577 0.06383 0.0652 1.79% Castro::reset_internal_energy(MultiFab) 63 0.04857 0.05052 0.05191 1.42% Castro::reset_internal_energy(Fab) 1008 0.04827 0.05023 0.05161 1.41% FabArray::ParallelCopy_nowait() 41 0.02755 0.04609 0.05147 1.41% Castro::do_old_sources() 10 0.03535 0.04635 0.04969 1.36% StateDataPhysBCFunct::() 41 0.03455 0.0431 0.04686 1.28% StateData::FillBoundary(geom) 41 0.03442 0.04297 0.04671 1.28% Castro::normalize_species() 62 0.03949 0.04158 0.04233 1.16% Castro::construct_new_source() 50 0.0248 0.02953 0.03068 0.84% Gravity::interpolate_monopole_grav() 21 0.02592 0.02732 0.02769 0.76% Castro::post_init() 1 0.02445 0.02466 0.02482 0.68% Amr::writePlotFile() 2 0.02409 0.02429 0.02449 0.67% Castro::construct_new_gravity_source() 10 0.02003 0.02288 0.02368 0.65% Castro::apply_source_to_state() 20 0.009771 0.01486 0.01679 0.46% MultiFab::Saxpy() 20 0.009736 0.01481 0.01672 0.46% Castro::post_timestep() 10 0.01482 0.01608 0.01659 0.45% VisMF::Write(FabArray) 2 0.01121 0.01208 0.01445 0.40% Castro::check_for_nan() 20 0.01037 0.01139 0.01336 0.37% MultiFab::contains_nan() 20 0.01035 0.01137 0.01333 0.37% FabArray::setDomainBndry() 41 0.00454 0.01132 0.01315 0.36% Castro::construct_old_source() 50 0.005376 0.01065 0.01215 0.33% Castro::construct_old_gravity_source() 10 0.005345 0.01057 0.01208 0.33% Castro::Castro() 1 0.00988 0.01007 0.01095 0.30% Castro::computeNewDt() 9 0.007308 0.00732 0.007327 0.20% Castro::initMFs() 1 0.005612 0.005837 0.007266 0.20% Castro::enforce_min_density() 62 0.005611 0.006181 0.006602 0.18% AmrLevel::AmrLevel(dm) 1 0.004509 0.004643 0.005085 0.14% StateData::define() 4 0.004498 0.004626 0.00506 0.14% Castro::swap_state_time_levels() 10 0.003064 0.003939 0.004085 0.11% Castro::finalize_do_advance() 10 0.0007809 0.001401 0.001713 0.05% Castro::buildMetrics() 1 0.001443 0.001491 0.001651 0.05% Castro::post_regrid() 1 0.001521 0.001596 0.001651 0.05% Amr::InitAmr() 1 0.0002665 0.0002915 0.0003836 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.114e-05 0.0001064 0.0001813 0.00% DistributionMapping::LeastUsedCPUs() 1 6.673e-06 0.0001006 0.0001768 0.00% FabArrayBase::getCPC() 41 8.167e-05 8.898e-05 0.0001078 0.00% Castro::enforce_consistent_e() 1 7.783e-05 8.864e-05 0.0001012 0.00% Amr::writeSmallPlotFile() 1 3.475e-05 6.534e-05 8.031e-05 0.00% Castro::finalize_advance() 10 5.7e-05 6.466e-05 7.041e-05 0.00% Castro::enforce_speed_limit() 62 2.528e-05 3.294e-05 4.47e-05 0.00% FabArrayBase::CPC::define() 2 2.321e-05 2.813e-05 4.033e-05 0.00% Gravity::swapTimeLevels() 10 9.017e-06 1.359e-05 1.663e-05 0.00% Castro::create_source_corrector() 10 8.571e-06 1.082e-05 1.492e-05 0.00% Gravity::set_mass_offset() 10 6.539e-06 9.599e-06 1.194e-05 0.00% Castro::FluxRegCrseInit 10 7.059e-06 9.246e-06 1.168e-05 0.00% Amr::initSubcycle() 1 7.941e-06 8.385e-06 9.42e-06 0.00% Castro::retry_advance_ctu() 10 4.142e-06 6.412e-06 7.857e-06 0.00% Castro::FluxRegFineAdd() 10 1.88e-06 2.344e-06 3.112e-06 0.00% DistributionMapping::Distribute() 1 9.49e-07 1.043e-06 1.17e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.07-12-g8e40952af9ab) finalized