MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.07-13-g4b7e20057a3d) initialized Starting run at 05:38:52 UTC on 2022-07-25. Successfully read inputs file ... Castro git describe: 22.07-10-gf80c3f7eb AMReX git describe: 22.07-13-g4b7e20057 Microphysics git describe: 22.07-15-ga4952214 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015877346 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.356753074 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.342556558 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.341347173 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342547322 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.349936003 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.3484798 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.336462972 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.337591063 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.3371122 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.337490307 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.06726839 seconds Ending run at 05:38:56 UTC on 2022-07-25. Run time = 3.731561931 Run time without initialization = 3.505011327 Average number of zones advanced per microsecond: 0.748 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.729 ... 3.731 ... 3.732 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1022 2.3997 2.5031 67.08% Castro::do_advance_ctu() 10 0.03254 0.138 0.4382 11.74% Gravity::make_radial_gravity() 21 0.3404 0.3554 0.3816 10.23% Castro::estTimeStep() 21 0.02616 0.07667 0.1629 4.36% Castro::initData() 1 0.03789 0.1054 0.1526 4.09% FabArray::ParallelCopy_finish() 41 0.04179 0.06151 0.1243 3.33% FabArray::setVal() 143 0.0558 0.0678 0.0712 1.91% Amr::writePlotFile() 2 0.0673 0.06971 0.07046 1.89% Castro::reset_internal_energy(Fab) 1008 0.04582 0.05046 0.05206 1.40% FabArray::ParallelCopy_nowait() 41 0.02776 0.04454 0.0503 1.35% StateData::FillBoundary(geom) 41 0.03739 0.04228 0.04663 1.25% Castro::normalize_species() 62 0.03984 0.04161 0.04311 1.16% FillPatchIterator::Initialize 41 0.02403 0.03575 0.03991 1.07% Gravity::interpolate_monopole_grav() 21 0.0258 0.0273 0.02778 0.74% Castro::construct_new_gravity_source() 10 0.01996 0.02287 0.02352 0.63% Castro::expand_state() 10 0.009911 0.01859 0.02193 0.59% Castro::computeTemp() 63 0.01802 0.01958 0.02056 0.55% Castro::initialize_do_advance() 10 0.0102 0.0173 0.01939 0.52% MultiFab::Saxpy() 20 0.008733 0.01431 0.01637 0.44% VisMF::Write(FabArray) 2 0.01295 0.01363 0.01608 0.43% Gravity::get_new_grav_vector() 11 0.007328 0.0115 0.01323 0.35% FabArray::setDomainBndry() 41 0.004925 0.01051 0.01263 0.34% MultiFab::contains_nan() 20 0.009436 0.01092 0.01248 0.33% Castro::construct_old_gravity_source() 10 0.004889 0.01002 0.0117 0.31% Gravity::get_old_grav_vector() 10 0.005651 0.009374 0.01086 0.29% Castro::initialize_advance() 10 0.003282 0.008755 0.01025 0.27% Castro::initMFs() 1 0.006459 0.008819 0.009669 0.26% StateData::define() 4 0.005399 0.007322 0.00801 0.21% Castro::construct_new_source() 50 0.004781 0.006526 0.007203 0.19% main() 1 0.004436 0.006107 0.006887 0.18% Castro::enforce_min_density() 62 0.005182 0.006071 0.006629 0.18% Castro::swap_state_time_levels() 10 0.003272 0.004309 0.004558 0.12% Amr::coarseTimeStep() 10 0.001092 0.001819 0.00373 0.10% Castro::buildMetrics() 1 0.001556 0.00209 0.002294 0.06% Castro::finalize_do_advance() 10 0.0006533 0.001547 0.001882 0.05% Amr::InitAmr() 1 0.0002817 0.0004766 0.0006444 0.02% Amr::timeStep() 10 0.000179 0.0002381 0.0004771 0.01% DistributionMapping::LeastUsedCPUs() 1 7.542e-06 0.0002152 0.0004522 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002834 0.000298 0.0003112 0.01% Castro::clean_state() 62 0.0001539 0.000175 0.0002056 0.01% Castro::enforce_consistent_e() 1 8.353e-05 0.0001207 0.0001681 0.00% StateDataPhysBCFunct::() 41 0.0001233 0.0001396 0.0001579 0.00% Castro::Castro() 1 5.212e-05 7.787e-05 0.0001019 0.00% Amr::FinalizeInit() 1 3.972e-06 1.698e-05 9.635e-05 0.00% Castro::construct_old_source() 50 3.446e-05 7.579e-05 9.446e-05 0.00% FabArray::ParallelCopy() 41 6.781e-05 8.036e-05 9.136e-05 0.00% Castro::do_new_sources() 10 4.342e-05 6.938e-05 8.87e-05 0.00% Castro::do_old_sources() 10 3.886e-05 6.901e-05 8.816e-05 0.00% Castro::subcycle_advance_ctu() 10 3.453e-05 5.265e-05 7.921e-05 0.00% FillPatchSingleLevel 41 6.165e-05 6.658e-05 7.493e-05 0.00% FabArrayBase::getCPC() 41 5.794e-05 6.296e-05 7.148e-05 0.00% Amr::writeSmallPlotFile() 1 2.516e-05 5.868e-05 7.121e-05 0.00% Castro::construct_old_gravity() 10 4.096e-05 5.747e-05 6.795e-05 0.00% Castro::apply_source_to_state() 20 4.745e-05 5.206e-05 6.687e-05 0.00% Castro::finalize_advance() 10 4.909e-05 5.386e-05 5.79e-05 0.00% Castro::construct_new_gravity() 10 3.606e-05 4.563e-05 5.125e-05 0.00% Castro::advance() 10 3.272e-05 4.317e-05 5.123e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.643e-05 2.738e-05 3.898e-05 0.00% Castro::enforce_speed_limit() 62 3.223e-05 3.455e-05 3.723e-05 0.00% FabArrayBase::CPC::define() 2 2.176e-05 2.643e-05 3.386e-05 0.00% Castro::check_for_nan() 20 1.899e-05 2.33e-05 3.071e-05 0.00% Amr::defBaseLevel() 1 1.869e-05 2.174e-05 2.542e-05 0.00% Gravity::swapTimeLevels() 10 5.252e-06 1.34e-05 1.81e-05 0.00% Castro::post_timestep() 10 1.128e-05 1.34e-05 1.53e-05 0.00% Castro::create_source_corrector() 10 6.101e-06 1.091e-05 1.492e-05 0.00% Amr::initSubcycle() 1 8.339e-06 1.242e-05 1.449e-05 0.00% Castro::FluxRegCrseInit 10 7.297e-06 1.036e-05 1.25e-05 0.00% Gravity::set_mass_offset() 10 6.867e-06 9.341e-06 1.084e-05 0.00% Castro::computeNewDt() 9 7.052e-06 8.957e-06 1.062e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.794e-06 4.956e-06 8.409e-06 0.00% Amr::InitializeInit() 1 2.37e-06 3.421e-06 7.952e-06 0.00% Castro::post_regrid() 1 1.59e-06 3.964e-06 7.254e-06 0.00% Castro::retry_advance_ctu() 10 4.238e-06 5.917e-06 6.85e-06 0.00% Castro::computeInitialDt() 2 3.234e-06 4.465e-06 5.99e-06 0.00% Castro::FluxRegFineAdd() 10 1.923e-06 2.861e-06 5.374e-06 0.00% Castro::post_init() 1 3.303e-06 3.997e-06 4.589e-06 0.00% Amr::init() 1 1.741e-06 1.987e-06 2.469e-06 0.00% Amr::initialInit() 1 1.244e-06 1.614e-06 2.247e-06 0.00% DistributionMapping::Distribute() 1 9.91e-07 1.321e-06 1.432e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.729 3.731 3.732 100.00% Amr::coarseTimeStep() 10 3.431 3.431 3.431 91.94% Amr::timeStep() 10 3.419 3.421 3.422 91.70% Castro::advance() 10 3.404 3.405 3.405 91.26% Castro::subcycle_advance_ctu() 10 3.333 3.336 3.347 89.69% Castro::do_advance_ctu() 10 3.333 3.336 3.347 89.69% Castro::construct_ctu_hydro_source() 10 2.102 2.4 2.503 67.08% Gravity::make_radial_gravity() 21 0.3404 0.3554 0.3816 10.23% Gravity::get_new_grav_vector() 11 0.2293 0.2336 0.2353 6.31% Castro::construct_old_gravity() 10 0.1987 0.2112 0.2313 6.20% Gravity::get_old_grav_vector() 10 0.1978 0.2104 0.2307 6.18% Amr::init() 1 0.2257 0.2259 0.2262 6.06% FillPatchIterator::Initialize 41 0.1856 0.195 0.2195 5.88% Amr::initialInit() 1 0.2097 0.2099 0.2102 5.63% Castro::construct_new_gravity() 10 0.2026 0.2063 0.2078 5.57% FillPatchSingleLevel 41 0.1341 0.1487 0.1905 5.11% Castro::initialize_do_advance() 10 0.1652 0.1776 0.1853 4.97% Amr::InitializeInit() 1 0.05692 0.1312 0.1794 4.81% Amr::defBaseLevel() 1 0.05692 0.1312 0.1794 4.81% Castro::estTimeStep() 21 0.02616 0.07667 0.1629 4.36% Castro::initData() 1 0.04157 0.1102 0.1568 4.20% Amr::FinalizeInit() 1 0.03028 0.07867 0.1533 4.11% FabArray::ParallelCopy() 41 0.09093 0.1062 0.1522 4.08% Castro::expand_state() 10 0.1221 0.13 0.1353 3.63% Castro::computeInitialDt() 2 0.00176 0.04997 0.1245 3.34% FabArray::ParallelCopy_finish() 41 0.04179 0.06151 0.1243 3.33% Castro::clean_state() 62 0.1085 0.1169 0.1205 3.23% Amr::writePlotFile() 2 0.0832 0.08334 0.08352 2.24% Castro::computeTemp() 63 0.06415 0.07034 0.07294 1.95% Castro::initialize_advance() 10 0.05722 0.06889 0.07159 1.92% FabArray::setVal() 143 0.0558 0.0678 0.0712 1.91% Castro::do_new_sources() 10 0.05281 0.06288 0.06475 1.74% Castro::reset_internal_energy(MultiFab) 63 0.04613 0.05076 0.05237 1.40% Castro::reset_internal_energy(Fab) 1008 0.04582 0.05046 0.05206 1.40% FabArray::ParallelCopy_nowait() 41 0.02786 0.04463 0.05039 1.35% Castro::do_old_sources() 10 0.03259 0.04518 0.04903 1.31% StateDataPhysBCFunct::() 41 0.03751 0.04242 0.04678 1.25% StateData::FillBoundary(geom) 41 0.03739 0.04228 0.04663 1.25% Castro::normalize_species() 62 0.03984 0.04161 0.04311 1.16% Castro::construct_new_source() 50 0.02474 0.02939 0.03055 0.82% Castro::post_init() 1 0.02769 0.02801 0.0282 0.76% Gravity::interpolate_monopole_grav() 21 0.0258 0.0273 0.02778 0.74% Castro::construct_new_gravity_source() 10 0.01996 0.02287 0.02352 0.63% Castro::post_timestep() 10 0.01466 0.01578 0.01656 0.44% Castro::apply_source_to_state() 20 0.008781 0.01437 0.01644 0.44% MultiFab::Saxpy() 20 0.008733 0.01431 0.01637 0.44% VisMF::Write(FabArray) 2 0.01295 0.01363 0.01608 0.43% Castro::Castro() 1 0.009488 0.01345 0.01495 0.40% FabArray::setDomainBndry() 41 0.004925 0.01051 0.01263 0.34% Castro::check_for_nan() 20 0.00946 0.01095 0.01251 0.34% MultiFab::contains_nan() 20 0.009436 0.01092 0.01248 0.33% Castro::construct_old_source() 50 0.004923 0.0101 0.01179 0.32% Castro::construct_old_gravity_source() 10 0.004889 0.01002 0.0117 0.31% Castro::initMFs() 1 0.006459 0.008819 0.009669 0.26% AmrLevel::AmrLevel(dm) 1 0.005425 0.00735 0.008034 0.22% StateData::define() 4 0.005399 0.007322 0.00801 0.21% Castro::computeNewDt() 9 0.007113 0.007119 0.007129 0.19% Castro::enforce_min_density() 62 0.005182 0.006071 0.006629 0.18% Castro::swap_state_time_levels() 10 0.003272 0.004309 0.004558 0.12% Castro::buildMetrics() 1 0.001667 0.002282 0.002517 0.07% Castro::post_regrid() 1 0.001506 0.001654 0.002087 0.06% Castro::finalize_do_advance() 10 0.0006533 0.001547 0.001882 0.05% Amr::InitAmr() 1 0.0002907 0.000489 0.0006575 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.266e-05 0.0002215 0.0004583 0.01% DistributionMapping::LeastUsedCPUs() 1 7.542e-06 0.0002152 0.0004522 0.01% Castro::enforce_consistent_e() 1 8.353e-05 0.0001207 0.0001681 0.00% FabArrayBase::getCPC() 41 8.065e-05 8.939e-05 9.886e-05 0.00% Castro::finalize_advance() 10 6.219e-05 6.708e-05 7.232e-05 0.00% Amr::writeSmallPlotFile() 1 2.516e-05 5.868e-05 7.121e-05 0.00% Castro::enforce_speed_limit() 62 3.223e-05 3.455e-05 3.723e-05 0.00% FabArrayBase::CPC::define() 2 2.176e-05 2.643e-05 3.386e-05 0.00% Gravity::swapTimeLevels() 10 5.252e-06 1.34e-05 1.81e-05 0.00% Castro::create_source_corrector() 10 6.101e-06 1.091e-05 1.492e-05 0.00% Amr::initSubcycle() 1 8.339e-06 1.242e-05 1.449e-05 0.00% Castro::FluxRegCrseInit 10 7.297e-06 1.036e-05 1.25e-05 0.00% Gravity::set_mass_offset() 10 6.867e-06 9.341e-06 1.084e-05 0.00% Castro::retry_advance_ctu() 10 4.238e-06 5.917e-06 6.85e-06 0.00% Castro::FluxRegFineAdd() 10 1.923e-06 2.861e-06 5.374e-06 0.00% DistributionMapping::Distribute() 1 9.91e-07 1.321e-06 1.432e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.07-13-g4b7e20057a3d) finalized