MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.07-13-g4b7e20057a3d) initialized Starting run at 05:39:23 UTC on 2022-07-26. Successfully read inputs file ... Castro git describe: 22.07-13-g4177c4b30 AMReX git describe: 22.07-13-g4b7e20057 Microphysics git describe: 22.07-15-ga4952214 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015332601 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.356194386 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.357172181 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.349447582 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.354343249 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.362780109 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.357802683 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.346538695 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.347667849 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.347478465 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.343892554 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010642556 seconds Ending run at 05:39:27 UTC on 2022-07-26. Run time = 3.723158237 Run time without initialization = 3.541632672 Average number of zones advanced per microsecond: 0.740 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.723 ... 3.723 ... 3.723 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1142 2.4195 2.5768 69.21% Castro::do_advance_ctu() 10 0.02955 0.1894 0.4984 13.39% Gravity::make_radial_gravity() 21 0.3479 0.3669 0.3981 10.69% FabArray::ParallelCopy_finish() 41 0.04474 0.06365 0.1331 3.57% Castro::initData() 1 0.03843 0.07642 0.1134 3.05% Castro::estTimeStep() 21 0.02688 0.0668 0.1069 2.87% FabArray::setVal() 143 0.06053 0.06869 0.07158 1.92% StateData::FillBoundary(geom) 41 0.03597 0.04363 0.05221 1.40% Castro::reset_internal_energy(Fab) 1008 0.04546 0.04985 0.05208 1.40% FabArray::ParallelCopy_nowait() 41 0.0263 0.04548 0.05121 1.38% Castro::normalize_species() 62 0.0387 0.0416 0.04282 1.15% FillPatchIterator::Initialize 41 0.02293 0.0365 0.04045 1.09% Gravity::interpolate_monopole_grav() 21 0.02545 0.02728 0.02813 0.76% Castro::construct_new_gravity_source() 10 0.01956 0.02282 0.02373 0.64% Castro::expand_state() 10 0.009525 0.01901 0.0222 0.60% Castro::computeTemp() 63 0.01698 0.01905 0.02044 0.55% Castro::initialize_do_advance() 10 0.009343 0.01829 0.01996 0.54% VisMF::Write(FabArray) 2 0.01267 0.01367 0.01762 0.47% MultiFab::Saxpy() 20 0.008305 0.0144 0.01651 0.44% MultiFab::contains_nan() 20 0.009724 0.01144 0.014 0.38% Amr::writePlotFile() 2 0.008586 0.01256 0.01387 0.37% Gravity::get_new_grav_vector() 11 0.007319 0.01173 0.01359 0.36% FabArray::setDomainBndry() 41 0.00466 0.01103 0.01286 0.35% Castro::construct_old_gravity_source() 10 0.004861 0.01014 0.01178 0.32% Castro::initialize_advance() 10 0.006554 0.0099 0.01121 0.30% Gravity::get_old_grav_vector() 10 0.005489 0.00977 0.0112 0.30% Castro::initMFs() 1 0.006733 0.007061 0.008321 0.22% Castro::construct_new_source() 50 0.004651 0.006501 0.007164 0.19% main() 1 0.006407 0.006679 0.006905 0.19% Castro::enforce_min_density() 62 0.00523 0.00611 0.006639 0.18% StateData::define() 4 0.005664 0.005884 0.006306 0.17% Castro::swap_state_time_levels() 10 0.003199 0.004301 0.004679 0.13% Amr::coarseTimeStep() 10 0.001045 0.00141 0.002446 0.07% Castro::buildMetrics() 1 0.001577 0.001663 0.00181 0.05% Castro::finalize_do_advance() 10 0.0006264 0.001492 0.001751 0.05% Amr::timeStep() 10 0.0001714 0.0002249 0.0004734 0.01% Amr::InitAmr() 1 0.0002653 0.0002918 0.0003972 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002652 0.0002903 0.000314 0.01% Castro::clean_state() 62 0.0001384 0.0001609 0.0001747 0.00% StateDataPhysBCFunct::() 41 9.69e-05 0.000136 0.0001639 0.00% DistributionMapping::LeastUsedCPUs() 1 6.774e-06 0.0001121 0.0001325 0.00% Amr::FinalizeInit() 1 4.165e-06 1.758e-05 0.0001064 0.00% FabArray::ParallelCopy() 41 5.733e-05 8.339e-05 9.96e-05 0.00% Castro::enforce_consistent_e() 1 7.308e-05 8.639e-05 9.953e-05 0.00% Castro::construct_old_source() 50 2.798e-05 7.12e-05 9.029e-05 0.00% Castro::Castro() 1 5.279e-05 7.181e-05 8.764e-05 0.00% Castro::do_new_sources() 10 3.93e-05 6.454e-05 8.426e-05 0.00% Amr::writeSmallPlotFile() 1 2.419e-05 6.388e-05 8.044e-05 0.00% Castro::do_old_sources() 10 3.416e-05 6.407e-05 7.783e-05 0.00% FillPatchSingleLevel 41 5.018e-05 6.002e-05 7.254e-05 0.00% FabArrayBase::getCPC() 41 4.203e-05 5.755e-05 6.652e-05 0.00% Castro::construct_old_gravity() 10 3.294e-05 5.361e-05 6.439e-05 0.00% Castro::subcycle_advance_ctu() 10 2.614e-05 4.664e-05 6.14e-05 0.00% Castro::apply_source_to_state() 20 2.666e-05 4.597e-05 5.916e-05 0.00% Castro::construct_new_gravity() 10 3.244e-05 4.359e-05 5.531e-05 0.00% Castro::finalize_advance() 10 4.365e-05 5.078e-05 5.504e-05 0.00% Castro::advance() 10 2.81e-05 4.297e-05 4.943e-05 0.00% FabArrayBase::CPC::define() 2 2.219e-05 2.675e-05 4.262e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.257e-05 1.879e-05 3.531e-05 0.00% Castro::enforce_speed_limit() 62 2.252e-05 3.109e-05 3.509e-05 0.00% Amr::defBaseLevel() 1 1.808e-05 2.711e-05 3.344e-05 0.00% Castro::check_for_nan() 20 1.908e-05 2.218e-05 2.81e-05 0.00% Castro::post_timestep() 10 1.287e-05 1.446e-05 1.672e-05 0.00% Gravity::swapTimeLevels() 10 5.87e-06 1.342e-05 1.655e-05 0.00% Castro::create_source_corrector() 10 7.42e-06 1.076e-05 1.517e-05 0.00% Castro::FluxRegCrseInit 10 6.212e-06 9.885e-06 1.154e-05 0.00% Gravity::set_mass_offset() 10 6.304e-06 9.287e-06 1.083e-05 0.00% Castro::computeNewDt() 9 7.692e-06 9.037e-06 1.03e-05 0.00% Castro::post_init() 1 2.859e-06 4.319e-06 9.318e-06 0.00% Amr::initSubcycle() 1 7.947e-06 8.517e-06 9.208e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.489e-06 4.958e-06 8.09e-06 0.00% Castro::retry_advance_ctu() 10 3.264e-06 5.701e-06 7.406e-06 0.00% Amr::InitializeInit() 1 2.051e-06 2.917e-06 6.792e-06 0.00% Castro::computeInitialDt() 2 3.339e-06 4.217e-06 5.127e-06 0.00% Castro::post_regrid() 1 1.657e-06 2.712e-06 3.713e-06 0.00% Castro::FluxRegFineAdd() 10 1.45e-06 2.428e-06 3.266e-06 0.00% Amr::init() 1 1.775e-06 2.027e-06 2.567e-06 0.00% Amr::initialInit() 1 1.298e-06 1.572e-06 1.839e-06 0.00% DistributionMapping::Distribute() 1 8.66e-07 1.032e-06 1.191e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.723 3.723 3.723 100.00% Amr::coarseTimeStep() 10 3.524 3.524 3.524 94.65% Amr::timeStep() 10 3.514 3.515 3.515 94.41% Castro::advance() 10 3.498 3.499 3.499 93.97% Castro::subcycle_advance_ctu() 10 3.425 3.428 3.436 92.29% Castro::do_advance_ctu() 10 3.425 3.428 3.436 92.29% Castro::construct_ctu_hydro_source() 10 2.114 2.42 2.577 69.21% Gravity::make_radial_gravity() 21 0.3479 0.3669 0.3981 10.69% Gravity::get_new_grav_vector() 11 0.2355 0.2399 0.2423 6.51% Castro::construct_old_gravity() 10 0.2023 0.2178 0.2403 6.45% Gravity::get_old_grav_vector() 10 0.2014 0.217 0.2397 6.44% FillPatchIterator::Initialize 41 0.1894 0.2007 0.2232 6.00% Castro::construct_new_gravity() 10 0.2087 0.2126 0.215 5.77% FillPatchSingleLevel 41 0.1374 0.1531 0.1957 5.25% Castro::initialize_do_advance() 10 0.168 0.1822 0.1917 5.15% Amr::init() 1 0.181 0.1811 0.1811 4.86% Amr::initialInit() 1 0.1653 0.1656 0.1658 4.45% FabArray::ParallelCopy() 41 0.09402 0.1093 0.1595 4.28% Castro::expand_state() 10 0.1221 0.1338 0.1404 3.77% Amr::InitializeInit() 1 0.05985 0.09779 0.1352 3.63% Amr::defBaseLevel() 1 0.05984 0.09779 0.1352 3.63% FabArray::ParallelCopy_finish() 41 0.04474 0.06365 0.1331 3.57% Castro::clean_state() 62 0.1058 0.1162 0.1207 3.24% Castro::initData() 1 0.04179 0.0804 0.1176 3.16% Castro::estTimeStep() 21 0.02688 0.0668 0.1069 2.87% Amr::FinalizeInit() 1 0.03055 0.06778 0.1057 2.84% Castro::computeInitialDt() 2 0.001721 0.03911 0.07695 2.07% Castro::initialize_advance() 10 0.06159 0.07057 0.07379 1.98% Castro::computeTemp() 63 0.06273 0.06919 0.07283 1.96% FabArray::setVal() 143 0.06053 0.06869 0.07158 1.92% Castro::do_new_sources() 10 0.0526 0.06257 0.06483 1.74% Castro::reset_internal_energy(MultiFab) 63 0.04574 0.05014 0.05239 1.41% StateDataPhysBCFunct::() 41 0.03607 0.04377 0.05235 1.41% StateData::FillBoundary(geom) 41 0.03597 0.04363 0.05221 1.40% Castro::reset_internal_energy(Fab) 1008 0.04546 0.04985 0.05208 1.40% FabArray::ParallelCopy_nowait() 41 0.02638 0.04556 0.05129 1.38% Castro::do_old_sources() 10 0.03121 0.04523 0.0495 1.33% Castro::normalize_species() 62 0.0387 0.0416 0.04282 1.15% Castro::construct_new_source() 50 0.02421 0.02933 0.03072 0.83% Castro::post_init() 1 0.02773 0.02799 0.02819 0.76% Gravity::interpolate_monopole_grav() 21 0.02545 0.02728 0.02813 0.76% Amr::writePlotFile() 2 0.02605 0.02624 0.02654 0.71% Castro::construct_new_gravity_source() 10 0.01956 0.02282 0.02373 0.64% VisMF::Write(FabArray) 2 0.01267 0.01367 0.01762 0.47% Castro::apply_source_to_state() 20 0.008334 0.01444 0.01656 0.44% MultiFab::Saxpy() 20 0.008305 0.0144 0.01651 0.44% Castro::post_timestep() 10 0.01566 0.01593 0.01621 0.44% Castro::check_for_nan() 20 0.009743 0.01146 0.01403 0.38% MultiFab::contains_nan() 20 0.009724 0.01144 0.014 0.38% FabArray::setDomainBndry() 41 0.00466 0.01103 0.01286 0.35% Castro::Castro() 1 0.01092 0.01134 0.01225 0.33% Castro::construct_old_source() 50 0.004889 0.01021 0.01187 0.32% Castro::construct_old_gravity_source() 10 0.004861 0.01014 0.01178 0.32% Castro::initMFs() 1 0.006733 0.007061 0.008321 0.22% Castro::computeNewDt() 9 0.007068 0.007074 0.00708 0.19% Castro::enforce_min_density() 62 0.00523 0.00611 0.006639 0.18% AmrLevel::AmrLevel(dm) 1 0.005676 0.005903 0.006325 0.17% StateData::define() 4 0.005664 0.005884 0.006306 0.17% Castro::swap_state_time_levels() 10 0.003199 0.004301 0.004679 0.13% Castro::buildMetrics() 1 0.0017 0.001796 0.00196 0.05% Castro::finalize_do_advance() 10 0.0006264 0.001492 0.001751 0.05% Castro::post_regrid() 1 0.001561 0.001592 0.001653 0.04% Amr::InitAmr() 1 0.0002743 0.0003003 0.0004052 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.136e-05 0.0001181 0.0001399 0.00% DistributionMapping::LeastUsedCPUs() 1 6.774e-06 0.0001121 0.0001325 0.00% FabArrayBase::getCPC() 41 6.758e-05 8.43e-05 0.0001051 0.00% Castro::enforce_consistent_e() 1 7.308e-05 8.639e-05 9.953e-05 0.00% Amr::writeSmallPlotFile() 1 2.419e-05 6.388e-05 8.044e-05 0.00% Castro::finalize_advance() 10 5.25e-05 6.309e-05 6.831e-05 0.00% FabArrayBase::CPC::define() 2 2.219e-05 2.675e-05 4.262e-05 0.00% Castro::enforce_speed_limit() 62 2.252e-05 3.109e-05 3.509e-05 0.00% Gravity::swapTimeLevels() 10 5.87e-06 1.342e-05 1.655e-05 0.00% Castro::create_source_corrector() 10 7.42e-06 1.076e-05 1.517e-05 0.00% Castro::FluxRegCrseInit 10 6.212e-06 9.885e-06 1.154e-05 0.00% Gravity::set_mass_offset() 10 6.304e-06 9.287e-06 1.083e-05 0.00% Amr::initSubcycle() 1 7.947e-06 8.517e-06 9.208e-06 0.00% Castro::retry_advance_ctu() 10 3.264e-06 5.701e-06 7.406e-06 0.00% Castro::FluxRegFineAdd() 10 1.45e-06 2.428e-06 3.266e-06 0.00% DistributionMapping::Distribute() 1 8.66e-07 1.032e-06 1.191e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.07-13-g4b7e20057a3d) finalized