MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.07-19-g48702b48836d) initialized Starting run at 05:39:19 UTC on 2022-07-29. Successfully read inputs file ... Castro git describe: 22.07-13-g4177c4b30 AMReX git describe: 22.07-19-g48702b488 Microphysics git describe: 22.07-15-ga4952214 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01525281 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.35819754 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.341701422 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.341414438 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342292616 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.352274612 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.350361358 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338547757 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.338717537 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.337605945 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.3381184 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010595478 seconds Ending run at 05:39:23 UTC on 2022-07-29. Run time = 3.675443044 Run time without initialization = 3.457709482 Average number of zones advanced per microsecond: 0.758 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.673 ... 3.675 ... 3.675 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1161 2.4072 2.5084 68.25% Castro::do_advance_ctu() 10 0.03837 0.1411 0.4353 11.84% Gravity::make_radial_gravity() 21 0.3339 0.3491 0.377 10.26% Castro::initData() 1 0.03823 0.08688 0.1485 4.04% Castro::estTimeStep() 21 0.02988 0.09442 0.1436 3.91% FabArray::ParallelCopy_finish() 41 0.0442 0.06244 0.1293 3.52% FabArray::setVal() 143 0.05569 0.06742 0.07068 1.92% Castro::reset_internal_energy(Fab) 1008 0.04671 0.05023 0.05264 1.43% FabArray::ParallelCopy_nowait() 41 0.02754 0.04467 0.0508 1.38% StateData::FillBoundary(geom) 41 0.03456 0.0418 0.04617 1.26% Castro::normalize_species() 62 0.03981 0.04129 0.04229 1.15% FillPatchIterator::Initialize 41 0.02331 0.03575 0.04 1.09% Gravity::interpolate_monopole_grav() 21 0.02597 0.02732 0.02801 0.76% Castro::construct_new_gravity_source() 10 0.02 0.0229 0.02401 0.65% Castro::expand_state() 10 0.009861 0.01877 0.0224 0.61% Castro::computeTemp() 63 0.01793 0.0192 0.01983 0.54% Castro::initialize_do_advance() 10 0.009382 0.0172 0.01936 0.53% MultiFab::Saxpy() 20 0.008735 0.01451 0.01639 0.45% VisMF::Write(FabArray) 2 0.01233 0.0133 0.01584 0.43% Amr::writePlotFile() 2 0.01024 0.01279 0.0141 0.38% Gravity::get_new_grav_vector() 11 0.007309 0.01133 0.01279 0.35% FabArray::setDomainBndry() 41 0.004893 0.01044 0.01234 0.34% MultiFab::contains_nan() 20 0.009335 0.01092 0.01225 0.33% Castro::construct_old_gravity_source() 10 0.004929 0.01007 0.01163 0.32% Gravity::get_old_grav_vector() 10 0.005396 0.00953 0.01109 0.30% Castro::initialize_advance() 10 0.003238 0.008788 0.01031 0.28% Castro::initMFs() 1 0.00662 0.007617 0.009968 0.27% StateData::define() 4 0.005566 0.006402 0.008056 0.22% Castro::enforce_min_density() 62 0.006135 0.006713 0.007272 0.20% Castro::construct_new_source() 50 0.004897 0.006505 0.007125 0.19% main() 1 0.004182 0.006139 0.007125 0.19% Castro::swap_state_time_levels() 10 0.003257 0.004267 0.00474 0.13% Amr::coarseTimeStep() 10 0.0008237 0.00172 0.003687 0.10% Castro::buildMetrics() 1 0.001571 0.001818 0.002309 0.06% Castro::finalize_do_advance() 10 0.0006538 0.001383 0.001608 0.04% Amr::timeStep() 10 0.0001789 0.000238 0.0005583 0.02% Amr::InitAmr() 1 0.0002857 0.0003676 0.0005062 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002932 0.00031 0.0003309 0.01% DistributionMapping::LeastUsedCPUs() 1 5.799e-06 0.0001715 0.000261 0.01% Castro::clean_state() 62 0.0001452 0.0001617 0.0001757 0.00% StateDataPhysBCFunct::() 41 9.539e-05 0.0001214 0.0001435 0.00% Castro::enforce_consistent_e() 1 8.237e-05 9.461e-05 0.0001424 0.00% Castro::construct_old_source() 50 2.758e-05 7.343e-05 9.82e-05 0.00% FabArray::ParallelCopy() 41 6.186e-05 8.443e-05 9.637e-05 0.00% Castro::do_old_sources() 10 3.815e-05 6.886e-05 8.675e-05 0.00% Amr::FinalizeInit() 1 3.533e-06 1.495e-05 8.499e-05 0.00% Castro::do_new_sources() 10 4.168e-05 6.813e-05 8.375e-05 0.00% FabArrayBase::getCPC() 41 5.632e-05 6.218e-05 8.011e-05 0.00% Castro::Castro() 1 5.716e-05 6.481e-05 7.748e-05 0.00% FillPatchSingleLevel 41 5.127e-05 6.534e-05 7.191e-05 0.00% Castro::advance() 10 2.786e-05 4.532e-05 7.184e-05 0.00% Amr::writeSmallPlotFile() 1 3.201e-05 5.882e-05 7.096e-05 0.00% Castro::construct_old_gravity() 10 2.965e-05 5.066e-05 6.187e-05 0.00% Castro::subcycle_advance_ctu() 10 2.905e-05 4.701e-05 6.02e-05 0.00% Castro::construct_new_gravity() 10 3.404e-05 4.765e-05 5.902e-05 0.00% Castro::finalize_advance() 10 4.72e-05 5.201e-05 5.708e-05 0.00% Castro::apply_source_to_state() 20 3.223e-05 4.675e-05 5.411e-05 0.00% Amr::defBaseLevel() 1 1.954e-05 2.549e-05 3.612e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.71e-05 2.624e-05 3.376e-05 0.00% Castro::enforce_speed_limit() 62 2.078e-05 2.683e-05 3.131e-05 0.00% Castro::check_for_nan() 20 1.887e-05 2.374e-05 3.059e-05 0.00% FabArrayBase::CPC::define() 2 1.967e-05 2.371e-05 2.824e-05 0.00% Castro::post_timestep() 10 1.292e-05 1.67e-05 2.606e-05 0.00% Gravity::swapTimeLevels() 10 5.966e-06 1.262e-05 1.623e-05 0.00% Amr::initSubcycle() 1 8.339e-06 1.074e-05 1.615e-05 0.00% Castro::create_source_corrector() 10 6.375e-06 1.028e-05 1.298e-05 0.00% Castro::computeNewDt() 9 7.926e-06 9.796e-06 1.166e-05 0.00% Gravity::set_mass_offset() 10 6.22e-06 9.204e-06 1.135e-05 0.00% Castro::post_regrid() 1 2.306e-06 3.88e-06 9.603e-06 0.00% Castro::FluxRegCrseInit 10 7.001e-06 8.062e-06 8.855e-06 0.00% Castro::retry_advance_ctu() 10 4.092e-06 6.611e-06 8.388e-06 0.00% Amr::InitializeInit() 1 2.052e-06 4.41e-06 7.983e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.026e-06 5.093e-06 6.778e-06 0.00% Castro::computeInitialDt() 2 3.426e-06 4.306e-06 6.562e-06 0.00% Castro::post_init() 1 3.183e-06 3.709e-06 4.188e-06 0.00% Castro::FluxRegFineAdd() 10 1.95e-06 2.448e-06 2.997e-06 0.00% Amr::init() 1 1.587e-06 2.081e-06 2.483e-06 0.00% Amr::initialInit() 1 1.432e-06 1.655e-06 1.894e-06 0.00% DistributionMapping::Distribute() 1 9.33e-07 1.188e-06 1.371e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.673 3.675 3.675 100.00% Amr::coarseTimeStep() 10 3.44 3.44 3.44 93.59% Amr::timeStep() 10 3.428 3.43 3.431 93.35% Castro::advance() 10 3.413 3.414 3.414 92.89% Castro::subcycle_advance_ctu() 10 3.342 3.345 3.357 91.35% Castro::do_advance_ctu() 10 3.342 3.345 3.357 91.35% Castro::construct_ctu_hydro_source() 10 2.116 2.407 2.508 68.25% Gravity::make_radial_gravity() 21 0.3339 0.3491 0.377 10.26% Castro::construct_old_gravity() 10 0.1997 0.2117 0.2332 6.34% Gravity::get_old_grav_vector() 10 0.1988 0.2109 0.2327 6.33% Gravity::get_new_grav_vector() 11 0.2242 0.2276 0.2289 6.23% FillPatchIterator::Initialize 41 0.1884 0.1955 0.2211 6.01% Amr::init() 1 0.2171 0.2172 0.2173 5.91% Castro::construct_new_gravity() 10 0.2001 0.2033 0.2042 5.56% Amr::initialInit() 1 0.2013 0.2018 0.202 5.50% FillPatchSingleLevel 41 0.137 0.1493 0.1928 5.25% Castro::initialize_do_advance() 10 0.163 0.1777 0.1853 5.04% Amr::InitializeInit() 1 0.0585 0.109 0.1742 4.74% Amr::defBaseLevel() 1 0.0585 0.109 0.1742 4.74% FabArray::ParallelCopy() 41 0.09382 0.1073 0.157 4.27% Castro::initData() 1 0.04225 0.09094 0.1521 4.14% Castro::estTimeStep() 21 0.02988 0.09442 0.1436 3.91% Amr::FinalizeInit() 1 0.02768 0.0928 0.1435 3.90% Castro::expand_state() 10 0.1183 0.1302 0.1357 3.69% FabArray::ParallelCopy_finish() 41 0.0442 0.06244 0.1293 3.52% Castro::clean_state() 62 0.1095 0.1169 0.1202 3.27% Castro::computeInitialDt() 2 0.001614 0.06699 0.1176 3.20% Castro::computeTemp() 63 0.06494 0.06974 0.07278 1.98% Castro::initialize_advance() 10 0.05549 0.0686 0.07192 1.96% FabArray::setVal() 143 0.05569 0.06742 0.07068 1.92% Castro::do_new_sources() 10 0.0535 0.06317 0.06503 1.77% Castro::reset_internal_energy(MultiFab) 63 0.04701 0.05054 0.05298 1.44% Castro::reset_internal_energy(Fab) 1008 0.04671 0.05023 0.05264 1.43% FabArray::ParallelCopy_nowait() 41 0.02763 0.04475 0.05088 1.38% Castro::do_old_sources() 10 0.0326 0.04547 0.04903 1.33% StateDataPhysBCFunct::() 41 0.03466 0.04193 0.0463 1.26% StateData::FillBoundary(geom) 41 0.03456 0.0418 0.04617 1.26% Castro::normalize_species() 62 0.03981 0.04129 0.04229 1.15% Castro::construct_new_source() 50 0.0249 0.0294 0.03064 0.83% Gravity::interpolate_monopole_grav() 21 0.02597 0.02732 0.02801 0.76% Amr::writePlotFile() 2 0.02584 0.02609 0.02643 0.72% Castro::post_init() 1 0.02434 0.0251 0.0255 0.69% Castro::construct_new_gravity_source() 10 0.02 0.0229 0.02401 0.65% Castro::post_timestep() 10 0.01488 0.01607 0.01672 0.45% Castro::apply_source_to_state() 20 0.008767 0.01456 0.01644 0.45% MultiFab::Saxpy() 20 0.008735 0.01451 0.01639 0.45% VisMF::Write(FabArray) 2 0.01233 0.0133 0.01584 0.43% Castro::Castro() 1 0.01036 0.01145 0.01405 0.38% FabArray::setDomainBndry() 41 0.004893 0.01044 0.01234 0.34% Castro::check_for_nan() 20 0.009354 0.01094 0.01228 0.33% MultiFab::contains_nan() 20 0.009335 0.01092 0.01225 0.33% Castro::construct_old_source() 50 0.004957 0.01014 0.01172 0.32% Castro::construct_old_gravity_source() 10 0.004929 0.01007 0.01163 0.32% Castro::initMFs() 1 0.00662 0.007617 0.009968 0.27% AmrLevel::AmrLevel(dm) 1 0.005593 0.006428 0.008088 0.22% StateData::define() 4 0.005566 0.006402 0.008056 0.22% Castro::computeNewDt() 9 0.007271 0.007273 0.007276 0.20% Castro::enforce_min_density() 62 0.006135 0.006713 0.007272 0.20% Castro::swap_state_time_levels() 10 0.003257 0.004267 0.00474 0.13% Castro::buildMetrics() 1 0.001687 0.001967 0.002525 0.07% Castro::post_regrid() 1 0.001512 0.001645 0.002048 0.06% Castro::finalize_do_advance() 10 0.0006538 0.001383 0.001608 0.04% Amr::InitAmr() 1 0.0002949 0.0003783 0.0005223 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.108e-05 0.0001778 0.0002689 0.01% DistributionMapping::LeastUsedCPUs() 1 5.799e-06 0.0001715 0.000261 0.01% Castro::enforce_consistent_e() 1 8.237e-05 9.461e-05 0.0001424 0.00% FabArrayBase::getCPC() 41 7.896e-05 8.589e-05 0.0001023 0.00% Amr::writeSmallPlotFile() 1 3.201e-05 5.882e-05 7.096e-05 0.00% Castro::finalize_advance() 10 5.656e-05 6.252e-05 6.804e-05 0.00% Castro::enforce_speed_limit() 62 2.078e-05 2.683e-05 3.131e-05 0.00% FabArrayBase::CPC::define() 2 1.967e-05 2.371e-05 2.824e-05 0.00% Gravity::swapTimeLevels() 10 5.966e-06 1.262e-05 1.623e-05 0.00% Amr::initSubcycle() 1 8.339e-06 1.074e-05 1.615e-05 0.00% Castro::create_source_corrector() 10 6.375e-06 1.028e-05 1.298e-05 0.00% Gravity::set_mass_offset() 10 6.22e-06 9.204e-06 1.135e-05 0.00% Castro::FluxRegCrseInit 10 7.001e-06 8.062e-06 8.855e-06 0.00% Castro::retry_advance_ctu() 10 4.092e-06 6.611e-06 8.388e-06 0.00% Castro::FluxRegFineAdd() 10 1.95e-06 2.448e-06 2.997e-06 0.00% DistributionMapping::Distribute() 1 9.33e-07 1.188e-06 1.371e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.07-19-g48702b48836d) finalized