MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.07-19-g48702b48836d) initialized Starting run at 16:20:27 UTC on 2022-07-30. Successfully read inputs file ... Castro git describe: 22.07-14-gc8fefc2df AMReX git describe: 22.07-19-g48702b488 Microphysics git describe: 22.07-15-ga4952214 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.017133355 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.370153837 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.349440661 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342338582 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342795098 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.355776213 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.354840399 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.341565929 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339407461 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.338561223 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.34272713 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010584396 seconds Ending run at 16:20:31 UTC on 2022-07-30. Run time = 3.68576772 Run time without initialization = 3.496160228 Average number of zones advanced per microsecond: 0.750 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.685 ... 3.686 ... 3.686 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1048 2.4269 2.5389 68.88% Castro::do_advance_ctu() 10 0.03406 0.1467 0.4727 12.82% Gravity::make_radial_gravity() 21 0.3433 0.3584 0.3872 10.50% FabArray::ParallelCopy_finish() 41 0.04527 0.06267 0.1221 3.31% Castro::estTimeStep() 21 0.03076 0.06628 0.1204 3.27% Castro::initData() 1 0.0401 0.0829 0.1187 3.22% FabArray::setVal() 143 0.06068 0.06869 0.07119 1.93% Castro::reset_internal_energy(Fab) 1008 0.04709 0.05057 0.052 1.41% FabArray::ParallelCopy_nowait() 41 0.02742 0.04459 0.05051 1.37% StateData::FillBoundary(geom) 41 0.03424 0.04278 0.0489 1.33% Castro::normalize_species() 62 0.04115 0.04191 0.0429 1.16% FillPatchIterator::Initialize 41 0.02471 0.03625 0.04069 1.10% Gravity::interpolate_monopole_grav() 21 0.027 0.02767 0.02809 0.76% Castro::construct_new_gravity_source() 10 0.02063 0.02309 0.02434 0.66% Castro::expand_state() 10 0.01025 0.01833 0.02189 0.59% Castro::computeTemp() 63 0.01802 0.0193 0.02058 0.56% Castro::initialize_do_advance() 10 0.01019 0.01767 0.01957 0.53% VisMF::Write(FabArray) 2 0.01311 0.0142 0.01868 0.51% MultiFab::Saxpy() 20 0.008456 0.01425 0.01609 0.44% Amr::writePlotFile() 2 0.009271 0.01355 0.01476 0.40% Gravity::get_new_grav_vector() 11 0.007567 0.01134 0.01293 0.35% FabArray::setDomainBndry() 41 0.004699 0.01032 0.01289 0.35% MultiFab::contains_nan() 20 0.01004 0.01132 0.01264 0.34% Castro::construct_old_gravity_source() 10 0.004808 0.01006 0.01172 0.32% Castro::initialize_advance() 10 0.006783 0.009944 0.01084 0.29% Gravity::get_old_grav_vector() 10 0.005445 0.009316 0.01067 0.29% Castro::initMFs() 1 0.006943 0.007465 0.008255 0.22% Castro::enforce_min_density() 62 0.00601 0.006797 0.007288 0.20% main() 1 0.006658 0.007025 0.007275 0.20% Castro::construct_new_source() 50 0.004814 0.006517 0.007223 0.20% StateData::define() 4 0.005681 0.005984 0.006463 0.18% Castro::swap_state_time_levels() 10 0.002608 0.004644 0.005226 0.14% Amr::coarseTimeStep() 10 0.001047 0.002541 0.00332 0.09% Castro::buildMetrics() 1 0.001631 0.001714 0.001845 0.05% Castro::finalize_do_advance() 10 0.0006427 0.001416 0.001682 0.05% Amr::timeStep() 10 0.0001704 0.0002243 0.0004648 0.01% Amr::InitAmr() 1 0.0002668 0.0003015 0.0004306 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002806 0.0002966 0.0003265 0.01% Castro::clean_state() 62 0.0001207 0.0001617 0.0002232 0.01% DistributionMapping::LeastUsedCPUs() 1 8.537e-06 0.0001404 0.0001699 0.00% StateDataPhysBCFunct::() 41 7.563e-05 0.0001213 0.0001412 0.00% Castro::enforce_consistent_e() 1 8.137e-05 9.432e-05 0.0001139 0.00% FabArray::ParallelCopy() 41 5.747e-05 7.967e-05 9.733e-05 0.00% Castro::construct_old_source() 50 3.996e-05 7.301e-05 9.606e-05 0.00% Castro::do_new_sources() 10 4.306e-05 7.208e-05 9.304e-05 0.00% Amr::FinalizeInit() 1 4.702e-06 1.577e-05 8.791e-05 0.00% Castro::do_old_sources() 10 3.376e-05 6.8e-05 8.351e-05 0.00% Amr::writeSmallPlotFile() 1 2.518e-05 6.018e-05 7.429e-05 0.00% Castro::construct_old_gravity() 10 3.014e-05 5.242e-05 7.257e-05 0.00% Castro::Castro() 1 5.523e-05 6.272e-05 7.226e-05 0.00% FillPatchSingleLevel 41 4.833e-05 6.289e-05 7.038e-05 0.00% Castro::construct_new_gravity() 10 3.292e-05 4.774e-05 6.936e-05 0.00% FabArrayBase::getCPC() 41 4.05e-05 5.441e-05 6.143e-05 0.00% Castro::apply_source_to_state() 20 2.858e-05 4.731e-05 6.024e-05 0.00% Castro::finalize_advance() 10 4.612e-05 5.362e-05 5.996e-05 0.00% Castro::subcycle_advance_ctu() 10 2.836e-05 4.248e-05 5.114e-05 0.00% Castro::advance() 10 2.636e-05 4.088e-05 4.791e-05 0.00% FabArrayBase::CPC::define() 2 2.334e-05 2.844e-05 3.243e-05 0.00% Castro::check_for_nan() 20 1.721e-05 2.348e-05 3.241e-05 0.00% Castro::post_timestep() 10 1.161e-05 1.694e-05 3.122e-05 0.00% Amr::defBaseLevel() 1 1.897e-05 2.4e-05 2.876e-05 0.00% Castro::enforce_speed_limit() 62 1.863e-05 2.507e-05 2.82e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.565e-05 1.922e-05 2.543e-05 0.00% Gravity::swapTimeLevels() 10 5.26e-06 1.283e-05 1.576e-05 0.00% Castro::create_source_corrector() 10 5.662e-06 1.006e-05 1.436e-05 0.00% Castro::computeNewDt() 9 6.867e-06 9.247e-06 1.12e-05 0.00% Castro::FluxRegCrseInit 10 6.093e-06 8.814e-06 1.079e-05 0.00% Gravity::set_mass_offset() 10 5.986e-06 8.659e-06 1.031e-05 0.00% Amr::initSubcycle() 1 8.191e-06 8.887e-06 9.595e-06 0.00% Castro::retry_advance_ctu() 10 3.443e-06 5.54e-06 7.527e-06 0.00% Amr::InitializeInit() 1 2.093e-06 3.814e-06 6.724e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.96e-06 4.561e-06 6.035e-06 0.00% Castro::computeInitialDt() 2 3.359e-06 4.067e-06 4.896e-06 0.00% Castro::post_init() 1 3.017e-06 3.805e-06 4.727e-06 0.00% Castro::post_regrid() 1 1.808e-06 2.991e-06 4.129e-06 0.00% Castro::FluxRegFineAdd() 10 2.499e-06 3.1e-06 3.74e-06 0.00% Amr::init() 1 1.776e-06 2.018e-06 2.328e-06 0.00% Amr::initialInit() 1 1.369e-06 1.515e-06 1.761e-06 0.00% DistributionMapping::Distribute() 1 8.56e-07 9.492e-07 1.014e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.685 3.686 3.686 100.00% Amr::coarseTimeStep() 10 3.478 3.478 3.478 94.37% Amr::timeStep() 10 3.466 3.467 3.469 94.11% Castro::advance() 10 3.45 3.451 3.451 93.63% Castro::subcycle_advance_ctu() 10 3.377 3.379 3.387 91.89% Castro::do_advance_ctu() 10 3.377 3.379 3.387 91.89% Castro::construct_ctu_hydro_source() 10 2.105 2.427 2.539 68.88% Gravity::make_radial_gravity() 21 0.3433 0.3584 0.3872 10.50% Castro::construct_old_gravity() 10 0.2025 0.2155 0.2368 6.42% Gravity::get_old_grav_vector() 10 0.2016 0.2147 0.2363 6.41% Gravity::get_new_grav_vector() 11 0.2277 0.2335 0.235 6.38% FillPatchIterator::Initialize 41 0.1896 0.197 0.2134 5.79% Castro::construct_new_gravity() 10 0.2 0.2048 0.2063 5.60% Amr::init() 1 0.189 0.1892 0.1892 5.13% Castro::initialize_do_advance() 10 0.1638 0.1792 0.1887 5.12% FillPatchSingleLevel 41 0.1372 0.1504 0.184 4.99% Amr::initialInit() 1 0.1717 0.1721 0.1727 4.68% FabArray::ParallelCopy() 41 0.09396 0.1074 0.1496 4.06% Amr::InitializeInit() 1 0.06094 0.1047 0.1401 3.80% Amr::defBaseLevel() 1 0.06094 0.1047 0.14 3.80% Castro::expand_state() 10 0.119 0.131 0.1378 3.74% Castro::initData() 1 0.04425 0.08709 0.1229 3.34% FabArray::ParallelCopy_finish() 41 0.04527 0.06267 0.1221 3.31% Castro::clean_state() 62 0.1118 0.118 0.1213 3.29% Castro::estTimeStep() 21 0.03076 0.06628 0.1204 3.27% Amr::FinalizeInit() 1 0.03187 0.06736 0.1108 3.01% Castro::computeInitialDt() 2 0.001802 0.03711 0.08075 2.19% Castro::initialize_advance() 10 0.06292 0.07154 0.07421 2.01% Castro::computeTemp() 63 0.06539 0.07017 0.07269 1.97% FabArray::setVal() 143 0.06068 0.06869 0.07119 1.93% Castro::do_new_sources() 10 0.0549 0.06351 0.06548 1.78% Castro::reset_internal_energy(MultiFab) 63 0.04737 0.05087 0.0523 1.42% Castro::reset_internal_energy(Fab) 1008 0.04709 0.05057 0.052 1.41% FabArray::ParallelCopy_nowait() 41 0.0275 0.04468 0.0506 1.37% StateDataPhysBCFunct::() 41 0.03432 0.0429 0.04904 1.33% Castro::do_old_sources() 10 0.03186 0.0451 0.04895 1.33% StateData::FillBoundary(geom) 41 0.03424 0.04278 0.0489 1.33% Castro::normalize_species() 62 0.04115 0.04191 0.0429 1.16% Castro::construct_new_source() 50 0.02545 0.0296 0.03071 0.83% Castro::post_init() 1 0.02931 0.02955 0.02987 0.81% Gravity::interpolate_monopole_grav() 21 0.027 0.02767 0.02809 0.76% Amr::writePlotFile() 2 0.02716 0.02775 0.02795 0.76% Castro::construct_new_gravity_source() 10 0.02063 0.02309 0.02434 0.66% VisMF::Write(FabArray) 2 0.01311 0.0142 0.01868 0.51% Castro::post_timestep() 10 0.01566 0.01616 0.0174 0.47% Castro::apply_source_to_state() 20 0.008484 0.0143 0.01615 0.44% MultiFab::Saxpy() 20 0.008456 0.01425 0.01609 0.44% FabArray::setDomainBndry() 41 0.004699 0.01032 0.01289 0.35% Castro::check_for_nan() 20 0.01006 0.01134 0.01267 0.34% MultiFab::contains_nan() 20 0.01004 0.01132 0.01264 0.34% Castro::Castro() 1 0.01092 0.01145 0.01226 0.33% Castro::construct_old_source() 50 0.004848 0.01013 0.01181 0.32% Castro::construct_old_gravity_source() 10 0.004808 0.01006 0.01172 0.32% Castro::initMFs() 1 0.006943 0.007465 0.008255 0.22% Castro::computeNewDt() 9 0.007565 0.007572 0.007582 0.21% Castro::enforce_min_density() 62 0.00601 0.006797 0.007288 0.20% AmrLevel::AmrLevel(dm) 1 0.005697 0.006003 0.00648 0.18% StateData::define() 4 0.005681 0.005984 0.006463 0.18% Castro::swap_state_time_levels() 10 0.002608 0.004644 0.005226 0.14% Castro::buildMetrics() 1 0.001745 0.001847 0.002004 0.05% Castro::post_regrid() 1 0.001506 0.001707 0.001972 0.05% Castro::finalize_do_advance() 10 0.0006427 0.001416 0.001682 0.05% Amr::InitAmr() 1 0.000275 0.0003104 0.0004388 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.351e-05 0.0001459 0.0001769 0.00% DistributionMapping::LeastUsedCPUs() 1 8.537e-06 0.0001404 0.0001699 0.00% Castro::enforce_consistent_e() 1 8.137e-05 9.432e-05 0.0001139 0.00% FabArrayBase::getCPC() 41 7.04e-05 8.286e-05 8.963e-05 0.00% Amr::writeSmallPlotFile() 1 2.518e-05 6.018e-05 7.429e-05 0.00% Castro::finalize_advance() 10 5.598e-05 6.553e-05 7.271e-05 0.00% FabArrayBase::CPC::define() 2 2.334e-05 2.844e-05 3.243e-05 0.00% Castro::enforce_speed_limit() 62 1.863e-05 2.507e-05 2.82e-05 0.00% Gravity::swapTimeLevels() 10 5.26e-06 1.283e-05 1.576e-05 0.00% Castro::create_source_corrector() 10 5.662e-06 1.006e-05 1.436e-05 0.00% Castro::FluxRegCrseInit 10 6.093e-06 8.814e-06 1.079e-05 0.00% Gravity::set_mass_offset() 10 5.986e-06 8.659e-06 1.031e-05 0.00% Amr::initSubcycle() 1 8.191e-06 8.887e-06 9.595e-06 0.00% Castro::retry_advance_ctu() 10 3.443e-06 5.54e-06 7.527e-06 0.00% Castro::FluxRegFineAdd() 10 2.499e-06 3.1e-06 3.74e-06 0.00% DistributionMapping::Distribute() 1 8.56e-07 9.492e-07 1.014e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.07-19-g48702b48836d) finalized