MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.07-19-g48702b48836d) initialized Starting run at 05:39:01 UTC on 2022-08-01. Successfully read inputs file ... Castro git describe: 22.07-14-ga2a554e52 AMReX git describe: 22.07-19-g48702b488 Microphysics git describe: 22.07-16-g593f02b0 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015754634 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.358043615 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.380677733 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.344329759 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342972657 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.35193531 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.345313529 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.337848499 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.337764092 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.338841264 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.33891683 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010781294 seconds Ending run at 05:39:05 UTC on 2022-08-01. Run time = 3.72578895 Run time without initialization = 3.495183686 Average number of zones advanced per microsecond: 0.750 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.723 ... 3.725 ... 3.726 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1063 2.4158 2.5176 67.57% Castro::do_advance_ctu() 10 0.04827 0.1491 0.4611 12.38% Gravity::make_radial_gravity() 21 0.3502 0.362 0.3907 10.49% Castro::initData() 1 0.0397 0.09548 0.157 4.21% Castro::estTimeStep() 21 0.04043 0.09858 0.1559 4.18% FabArray::ParallelCopy_finish() 41 0.03997 0.05982 0.1287 3.45% FabArray::setVal() 143 0.05362 0.06671 0.06973 1.87% Castro::reset_internal_energy(Fab) 1008 0.04848 0.05028 0.05223 1.40% FabArray::ParallelCopy_nowait() 41 0.02736 0.04594 0.05133 1.38% StateData::FillBoundary(geom) 41 0.03574 0.04216 0.04657 1.25% Castro::normalize_species() 62 0.04162 0.04201 0.043 1.15% FillPatchIterator::Initialize 41 0.02481 0.03761 0.04116 1.10% Gravity::interpolate_monopole_grav() 21 0.02666 0.02755 0.02803 0.75% Castro::construct_new_gravity_source() 10 0.02249 0.02329 0.02553 0.69% Castro::expand_state() 10 0.009695 0.01985 0.02361 0.63% Castro::initialize_do_advance() 10 0.01036 0.01848 0.02076 0.56% Castro::computeTemp() 63 0.01779 0.01883 0.01968 0.53% VisMF::Write(FabArray) 2 0.01317 0.01396 0.01642 0.44% MultiFab::Saxpy() 20 0.008266 0.01437 0.01642 0.44% Amr::writePlotFile() 2 0.01037 0.0126 0.0134 0.36% FabArray::setDomainBndry() 41 0.004709 0.01103 0.01309 0.35% Gravity::get_new_grav_vector() 11 0.008295 0.01184 0.01282 0.34% MultiFab::contains_nan() 20 0.01005 0.01135 0.0122 0.33% Castro::construct_old_gravity_source() 10 0.004891 0.01016 0.01177 0.32% Gravity::get_old_grav_vector() 10 0.005353 0.009705 0.01105 0.30% Castro::initialize_advance() 10 0.003706 0.008813 0.01067 0.29% Castro::initMFs() 1 0.006755 0.008149 0.01014 0.27% StateData::define() 4 0.005742 0.006785 0.008174 0.22% Castro::enforce_min_density() 62 0.006227 0.00678 0.007214 0.19% Castro::construct_new_source() 50 0.005043 0.006603 0.007164 0.19% main() 1 0.004363 0.006511 0.006989 0.19% Castro::swap_state_time_levels() 10 0.003303 0.004431 0.004669 0.13% Amr::coarseTimeStep() 10 0.002211 0.00269 0.003632 0.10% Castro::buildMetrics() 1 0.001633 0.001944 0.002331 0.06% Castro::finalize_do_advance() 10 0.000618 0.001509 0.00176 0.05% Amr::timeStep() 10 0.0001779 0.0002551 0.0005433 0.01% Amr::InitAmr() 1 0.0002888 0.0003685 0.0004935 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002932 0.0003098 0.000337 0.01% DistributionMapping::LeastUsedCPUs() 1 6.041e-06 0.0001606 0.0002475 0.01% Castro::clean_state() 62 0.0001493 0.0001684 0.0001815 0.00% StateDataPhysBCFunct::() 41 0.0001125 0.0001348 0.000156 0.00% Castro::enforce_consistent_e() 1 8.659e-05 0.0001026 0.0001393 0.00% FabArray::ParallelCopy() 41 7.384e-05 8.698e-05 9.75e-05 0.00% Castro::construct_old_source() 50 5.165e-05 7.982e-05 9.576e-05 0.00% FillPatchSingleLevel 41 6.595e-05 7.398e-05 9.432e-05 0.00% Castro::do_new_sources() 10 5.931e-05 7.527e-05 9.216e-05 0.00% Amr::writeSmallPlotFile() 1 4.99e-05 7.174e-05 9.139e-05 0.00% Castro::do_old_sources() 10 4.609e-05 7.019e-05 8.734e-05 0.00% Amr::FinalizeInit() 1 4.344e-06 1.439e-05 8.137e-05 0.00% Castro::Castro() 1 6.107e-05 6.793e-05 7.489e-05 0.00% Castro::subcycle_advance_ctu() 10 3.493e-05 5.142e-05 7.302e-05 0.00% Castro::construct_old_gravity() 10 4.459e-05 5.845e-05 7.169e-05 0.00% Castro::advance() 10 3.483e-05 4.885e-05 6.77e-05 0.00% FabArrayBase::getCPC() 41 5.128e-05 5.717e-05 6.233e-05 0.00% Castro::finalize_advance() 10 5.043e-05 5.553e-05 6.203e-05 0.00% Castro::construct_new_gravity() 10 4.327e-05 4.897e-05 5.743e-05 0.00% Castro::apply_source_to_state() 20 4.68e-05 4.906e-05 5.219e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.396e-05 2.525e-05 3.974e-05 0.00% FabArrayBase::CPC::define() 2 2.147e-05 2.584e-05 3.257e-05 0.00% Amr::defBaseLevel() 1 1.906e-05 2.255e-05 3.016e-05 0.00% Castro::enforce_speed_limit() 62 2.463e-05 2.604e-05 2.75e-05 0.00% Castro::check_for_nan() 20 2.055e-05 2.401e-05 2.735e-05 0.00% Castro::post_timestep() 10 1.366e-05 1.529e-05 1.732e-05 0.00% Gravity::swapTimeLevels() 10 5.963e-06 1.146e-05 1.552e-05 0.00% Amr::initSubcycle() 1 9.447e-06 1.08e-05 1.486e-05 0.00% Castro::create_source_corrector() 10 7.985e-06 1.053e-05 1.347e-05 0.00% Castro::computeNewDt() 9 8.102e-06 9.994e-06 1.14e-05 0.00% Castro::FluxRegCrseInit 10 5.027e-06 8.605e-06 1.083e-05 0.00% Gravity::set_mass_offset() 10 6.237e-06 8.954e-06 1.078e-05 0.00% Amr::InitializeInit() 1 2.045e-06 3.115e-06 7.924e-06 0.00% Castro::retry_advance_ctu() 10 4.843e-06 6.23e-06 7.504e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.94e-06 4.394e-06 5.58e-06 0.00% Castro::computeInitialDt() 2 3.627e-06 4.135e-06 5.073e-06 0.00% Castro::post_init() 1 3.093e-06 3.667e-06 4.176e-06 0.00% Castro::post_regrid() 1 2.219e-06 2.944e-06 3.882e-06 0.00% Castro::FluxRegFineAdd() 10 2.431e-06 3.076e-06 3.807e-06 0.00% Amr::init() 1 1.927e-06 2.363e-06 2.97e-06 0.00% Amr::initialInit() 1 1.255e-06 1.562e-06 1.962e-06 0.00% DistributionMapping::Distribute() 1 9.67e-07 1.121e-06 1.378e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.723 3.725 3.726 100.00% Amr::coarseTimeStep() 10 3.477 3.477 3.477 93.33% Amr::timeStep() 10 3.465 3.466 3.467 93.04% Castro::advance() 10 3.449 3.449 3.45 92.59% Castro::subcycle_advance_ctu() 10 3.378 3.381 3.393 91.08% Castro::do_advance_ctu() 10 3.378 3.381 3.393 91.08% Castro::construct_ctu_hydro_source() 10 2.106 2.416 2.518 67.57% Gravity::make_radial_gravity() 21 0.3502 0.362 0.3907 10.49% Gravity::get_new_grav_vector() 11 0.2404 0.2429 0.2448 6.57% Castro::construct_old_gravity() 10 0.2009 0.2115 0.2351 6.31% Gravity::get_old_grav_vector() 10 0.2 0.2106 0.2345 6.29% Amr::init() 1 0.2299 0.2301 0.2302 6.18% FillPatchIterator::Initialize 41 0.1868 0.1969 0.2217 5.95% Castro::construct_new_gravity() 10 0.2142 0.2159 0.2174 5.84% Amr::initialInit() 1 0.2141 0.2144 0.2146 5.76% FillPatchSingleLevel 41 0.1339 0.1483 0.1922 5.16% Castro::initialize_do_advance() 10 0.17 0.1792 0.1854 4.98% Amr::InitializeInit() 1 0.06196 0.119 0.184 4.94% Amr::defBaseLevel() 1 0.06195 0.119 0.184 4.94% Castro::initData() 1 0.04363 0.09983 0.1615 4.34% FabArray::ParallelCopy() 41 0.09061 0.1059 0.1562 4.19% Castro::estTimeStep() 21 0.04043 0.09858 0.1559 4.18% Amr::FinalizeInit() 1 0.03015 0.09542 0.1521 4.08% Castro::expand_state() 10 0.1252 0.1306 0.1352 3.63% FabArray::ParallelCopy_finish() 41 0.03997 0.05982 0.1287 3.45% Castro::computeInitialDt() 2 0.001733 0.06691 0.1239 3.32% Castro::clean_state() 62 0.1143 0.1173 0.1201 3.22% Castro::computeTemp() 63 0.0672 0.06943 0.07222 1.94% Castro::initialize_advance() 10 0.05502 0.06819 0.07186 1.93% FabArray::setVal() 143 0.05362 0.06671 0.06973 1.87% Castro::do_new_sources() 10 0.05816 0.06363 0.06846 1.84% Castro::reset_internal_energy(MultiFab) 63 0.04881 0.05059 0.05254 1.41% Castro::reset_internal_energy(Fab) 1008 0.04848 0.05028 0.05223 1.40% FabArray::ParallelCopy_nowait() 41 0.02745 0.04603 0.05141 1.38% Castro::do_old_sources() 10 0.03224 0.04538 0.04937 1.33% StateDataPhysBCFunct::() 41 0.03586 0.0423 0.04671 1.25% StateData::FillBoundary(geom) 41 0.03574 0.04216 0.04657 1.25% Castro::normalize_species() 62 0.04162 0.04201 0.043 1.15% Castro::construct_new_source() 50 0.0279 0.0299 0.03107 0.83% Gravity::interpolate_monopole_grav() 21 0.02666 0.02755 0.02803 0.75% Castro::post_init() 1 0.02749 0.02776 0.028 0.75% Amr::writePlotFile() 2 0.02642 0.02656 0.02679 0.72% Castro::construct_new_gravity_source() 10 0.02249 0.02329 0.02553 0.69% Castro::post_timestep() 10 0.01606 0.01641 0.01671 0.45% Castro::apply_source_to_state() 20 0.008318 0.01442 0.01646 0.44% VisMF::Write(FabArray) 2 0.01317 0.01396 0.01642 0.44% MultiFab::Saxpy() 20 0.008266 0.01437 0.01642 0.44% Castro::Castro() 1 0.009657 0.01214 0.01425 0.38% FabArray::setDomainBndry() 41 0.004709 0.01103 0.01309 0.35% Castro::check_for_nan() 20 0.01008 0.01138 0.01222 0.33% MultiFab::contains_nan() 20 0.01005 0.01135 0.0122 0.33% Castro::construct_old_source() 50 0.004942 0.01024 0.01186 0.32% Castro::construct_old_gravity_source() 10 0.004891 0.01016 0.01177 0.32% Castro::initMFs() 1 0.006755 0.008149 0.01014 0.27% AmrLevel::AmrLevel(dm) 1 0.005756 0.00681 0.008214 0.22% StateData::define() 4 0.005742 0.006785 0.008174 0.22% Castro::computeNewDt() 9 0.007701 0.007707 0.007714 0.21% Castro::enforce_min_density() 62 0.006227 0.00678 0.007214 0.19% Castro::swap_state_time_levels() 10 0.003303 0.004431 0.004669 0.13% Castro::buildMetrics() 1 0.001746 0.002094 0.002544 0.07% Castro::post_regrid() 1 0.001513 0.001645 0.001874 0.05% Castro::finalize_do_advance() 10 0.000618 0.001509 0.00176 0.05% Amr::InitAmr() 1 0.0002984 0.0003793 0.0005072 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.138e-05 0.0001662 0.0002545 0.01% DistributionMapping::LeastUsedCPUs() 1 6.041e-06 0.0001606 0.0002475 0.01% Castro::enforce_consistent_e() 1 8.659e-05 0.0001026 0.0001393 0.00% Amr::writeSmallPlotFile() 1 4.99e-05 7.174e-05 9.139e-05 0.00% FabArrayBase::getCPC() 41 7.545e-05 8.3e-05 8.82e-05 0.00% Castro::finalize_advance() 10 5.912e-05 6.721e-05 7.355e-05 0.00% FabArrayBase::CPC::define() 2 2.147e-05 2.584e-05 3.257e-05 0.00% Castro::enforce_speed_limit() 62 2.463e-05 2.604e-05 2.75e-05 0.00% Gravity::swapTimeLevels() 10 5.963e-06 1.146e-05 1.552e-05 0.00% Amr::initSubcycle() 1 9.447e-06 1.08e-05 1.486e-05 0.00% Castro::create_source_corrector() 10 7.985e-06 1.053e-05 1.347e-05 0.00% Castro::FluxRegCrseInit 10 5.027e-06 8.605e-06 1.083e-05 0.00% Gravity::set_mass_offset() 10 6.237e-06 8.954e-06 1.078e-05 0.00% Castro::retry_advance_ctu() 10 4.843e-06 6.23e-06 7.504e-06 0.00% Castro::FluxRegFineAdd() 10 2.431e-06 3.076e-06 3.807e-06 0.00% DistributionMapping::Distribute() 1 9.67e-07 1.121e-06 1.378e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.07-19-g48702b48836d) finalized