MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-1-g94693291667b) initialized Starting run at 17:51:03 UTC on 2022-08-03. Successfully read inputs file ... Castro git describe: 22.08-2-g2d612218e AMReX git describe: 22.08-1-g946932916 Microphysics git describe: 22.08 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016106935 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.363299342 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.343281753 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.343462203 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.343582429 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.353032374 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.354184309 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.339996807 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339769887 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.340212634 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.33901869 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010753957 seconds Ending run at 17:51:07 UTC on 2022-08-03. Run time = 3.67213939 Run time without initialization = 3.478602813 Average number of zones advanced per microsecond: 0.754 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.669 ... 3.672 ... 3.672 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1072 2.4155 2.5196 68.61% Castro::do_advance_ctu() 10 0.04028 0.1473 0.4588 12.49% Gravity::make_radial_gravity() 21 0.3369 0.3502 0.3764 10.25% Castro::initData() 1 0.03943 0.08052 0.1253 3.41% FabArray::ParallelCopy_finish() 41 0.04397 0.06497 0.1228 3.34% Castro::estTimeStep() 21 0.03007 0.07517 0.1148 3.13% FabArray::setVal() 143 0.06204 0.06942 0.0718 1.96% Castro::reset_internal_energy(Fab) 1008 0.04748 0.04987 0.05117 1.39% FabArray::ParallelCopy_nowait() 41 0.02811 0.04498 0.05072 1.38% StateData::FillBoundary(geom) 41 0.03463 0.0416 0.04601 1.25% Castro::normalize_species() 62 0.03989 0.04156 0.04271 1.16% FillPatchIterator::Initialize 41 0.02498 0.03652 0.04073 1.11% Gravity::interpolate_monopole_grav() 21 0.02641 0.02754 0.02791 0.76% Castro::construct_new_gravity_source() 10 0.02008 0.02285 0.02397 0.65% Castro::expand_state() 10 0.009555 0.01833 0.0216 0.59% Castro::computeTemp() 63 0.01744 0.01895 0.01997 0.54% Castro::initialize_do_advance() 10 0.0104 0.01761 0.01985 0.54% VisMF::Write(FabArray) 2 0.01324 0.01383 0.01662 0.45% MultiFab::Saxpy() 20 0.008655 0.01444 0.01648 0.45% Amr::writePlotFile() 2 0.01047 0.01353 0.01451 0.40% Gravity::get_new_grav_vector() 11 0.007279 0.01143 0.0128 0.35% FabArray::setDomainBndry() 41 0.005017 0.0105 0.01269 0.35% MultiFab::contains_nan() 20 0.009424 0.01121 0.01241 0.34% Castro::construct_old_gravity_source() 10 0.004933 0.01006 0.01181 0.32% Castro::initialize_advance() 10 0.006648 0.009981 0.01143 0.31% Gravity::get_old_grav_vector() 10 0.005324 0.009374 0.01106 0.30% Castro::initMFs() 1 0.006786 0.007256 0.008623 0.23% main() 1 0.004492 0.006744 0.007261 0.20% Castro::construct_new_source() 50 0.004797 0.006513 0.007137 0.19% Castro::enforce_min_density() 62 0.005835 0.006652 0.006986 0.19% StateData::define() 4 0.005618 0.005853 0.006453 0.18% Castro::swap_state_time_levels() 10 0.00336 0.004452 0.004698 0.13% Amr::coarseTimeStep() 10 0.0008707 0.00147 0.002817 0.08% Castro::buildMetrics() 1 0.0016 0.00167 0.001872 0.05% Castro::finalize_do_advance() 10 0.00064 0.001403 0.0016 0.04% Amr::timeStep() 10 0.0001686 0.0002252 0.0005472 0.01% Amr::InitAmr() 1 0.000268 0.000299 0.000428 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002723 0.0002952 0.0003061 0.01% Castro::clean_state() 62 0.0001215 0.0001758 0.0002124 0.01% DistributionMapping::LeastUsedCPUs() 1 8.104e-06 0.0001466 0.0001739 0.00% StateDataPhysBCFunct::() 41 7.978e-05 0.0001201 0.0001407 0.00% Castro::enforce_consistent_e() 1 7.692e-05 8.455e-05 9.24e-05 0.00% FabArray::ParallelCopy() 41 5.876e-05 7.836e-05 9.104e-05 0.00% Castro::construct_old_source() 50 2.697e-05 6.932e-05 8.963e-05 0.00% Amr::writeSmallPlotFile() 1 3.009e-05 6.152e-05 8.663e-05 0.00% Castro::Castro() 1 5.634e-05 6.625e-05 8.632e-05 0.00% Castro::do_new_sources() 10 3.949e-05 6.893e-05 8.552e-05 0.00% Castro::subcycle_advance_ctu() 10 2.698e-05 5.05e-05 8.406e-05 0.00% Amr::FinalizeInit() 1 3.476e-06 1.411e-05 7.992e-05 0.00% Castro::do_old_sources() 10 3.51e-05 6.399e-05 7.672e-05 0.00% FabArrayBase::getCPC() 41 4.312e-05 5.81e-05 7.185e-05 0.00% FillPatchSingleLevel 41 5.371e-05 6.087e-05 6.955e-05 0.00% Castro::finalize_advance() 10 4.625e-05 5.3e-05 5.902e-05 0.00% Castro::apply_source_to_state() 20 2.615e-05 4.565e-05 5.866e-05 0.00% Castro::construct_old_gravity() 10 2.993e-05 4.885e-05 5.794e-05 0.00% Castro::construct_new_gravity() 10 3.425e-05 4.553e-05 5.656e-05 0.00% Castro::advance() 10 2.983e-05 4.387e-05 5.526e-05 0.00% Amr::defBaseLevel() 1 1.883e-05 2.384e-05 3.537e-05 0.00% FabArrayBase::CPC::define() 2 2.206e-05 2.643e-05 3.337e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.892e-05 2.45e-05 3.035e-05 0.00% Castro::post_timestep() 10 1.259e-05 1.686e-05 2.826e-05 0.00% Castro::enforce_speed_limit() 62 2.044e-05 2.562e-05 2.818e-05 0.00% Castro::check_for_nan() 20 1.802e-05 2.271e-05 2.563e-05 0.00% Gravity::swapTimeLevels() 10 5.929e-06 1.244e-05 1.518e-05 0.00% Gravity::set_mass_offset() 10 6.489e-06 1e-05 1.458e-05 0.00% Castro::create_source_corrector() 10 5.544e-06 1.065e-05 1.322e-05 0.00% Castro::computeNewDt() 9 6.822e-06 9.415e-06 1.148e-05 0.00% Castro::FluxRegCrseInit 10 5.284e-06 8.559e-06 1.015e-05 0.00% Amr::initSubcycle() 1 8.034e-06 8.752e-06 9.575e-06 0.00% Amr::InitializeInit() 1 2.192e-06 4.888e-06 8.588e-06 0.00% Castro::retry_advance_ctu() 10 3.954e-06 6.081e-06 6.997e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.521e-06 5.011e-06 6.739e-06 0.00% Castro::post_init() 1 3.073e-06 3.588e-06 5.35e-06 0.00% Castro::computeInitialDt() 2 3.386e-06 4.199e-06 4.792e-06 0.00% Castro::post_regrid() 1 1.735e-06 2.603e-06 3.3e-06 0.00% Amr::init() 1 1.924e-06 2.279e-06 2.761e-06 0.00% Castro::FluxRegFineAdd() 10 1.704e-06 2.325e-06 2.712e-06 0.00% Amr::initialInit() 1 1.284e-06 1.711e-06 1.915e-06 0.00% DistributionMapping::Distribute() 1 9.37e-07 1.134e-06 1.298e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.669 3.672 3.672 100.00% Amr::coarseTimeStep() 10 3.461 3.461 3.461 94.24% Amr::timeStep() 10 3.45 3.451 3.452 93.99% Castro::advance() 10 3.434 3.435 3.435 93.55% Castro::subcycle_advance_ctu() 10 3.362 3.363 3.369 91.75% Castro::do_advance_ctu() 10 3.362 3.363 3.369 91.74% Castro::construct_ctu_hydro_source() 10 2.107 2.416 2.52 68.61% Gravity::make_radial_gravity() 21 0.3369 0.3502 0.3764 10.25% Gravity::get_new_grav_vector() 11 0.2254 0.2303 0.2327 6.34% Castro::construct_old_gravity() 10 0.1984 0.2104 0.229 6.24% Gravity::get_old_grav_vector() 10 0.1975 0.2096 0.2284 6.22% FillPatchIterator::Initialize 41 0.1892 0.1989 0.2182 5.94% Castro::construct_new_gravity() 10 0.2003 0.2042 0.206 5.61% Amr::init() 1 0.193 0.1931 0.1932 5.26% Castro::initialize_do_advance() 10 0.1692 0.1811 0.1893 5.16% FillPatchSingleLevel 41 0.1369 0.1519 0.1882 5.12% Amr::initialInit() 1 0.1762 0.1766 0.1771 4.82% FabArray::ParallelCopy() 41 0.0938 0.1101 0.1511 4.11% Amr::InitializeInit() 1 0.06022 0.1017 0.1475 4.02% Amr::defBaseLevel() 1 0.06021 0.1017 0.1475 4.02% Castro::expand_state() 10 0.1255 0.1331 0.1399 3.81% Castro::initData() 1 0.04333 0.08437 0.1287 3.51% FabArray::ParallelCopy_finish() 41 0.04397 0.06497 0.1228 3.34% Castro::clean_state() 62 0.1102 0.1166 0.1195 3.25% Amr::FinalizeInit() 1 0.02871 0.07488 0.1161 3.16% Castro::estTimeStep() 21 0.03007 0.07517 0.1148 3.13% Castro::computeInitialDt() 2 0.00162 0.04739 0.08893 2.42% Castro::initialize_advance() 10 0.06515 0.07162 0.07342 2.00% FabArray::setVal() 143 0.06204 0.06942 0.0718 1.96% Castro::computeTemp() 63 0.06526 0.06911 0.07131 1.94% Castro::do_new_sources() 10 0.05426 0.06323 0.06506 1.77% Castro::reset_internal_energy(MultiFab) 63 0.04779 0.05016 0.05147 1.40% Castro::reset_internal_energy(Fab) 1008 0.04748 0.04987 0.05117 1.39% FabArray::ParallelCopy_nowait() 41 0.02818 0.04506 0.0508 1.38% Castro::do_old_sources() 10 0.03235 0.04514 0.04917 1.34% StateDataPhysBCFunct::() 41 0.03471 0.04173 0.04615 1.26% StateData::FillBoundary(geom) 41 0.03463 0.0416 0.04601 1.25% Castro::normalize_species() 62 0.03989 0.04156 0.04271 1.16% Castro::construct_new_source() 50 0.02487 0.02936 0.03075 0.84% Gravity::interpolate_monopole_grav() 21 0.02641 0.02754 0.02791 0.76% Amr::writePlotFile() 2 0.02687 0.02736 0.02775 0.76% Castro::post_init() 1 0.02642 0.02685 0.02735 0.74% Castro::construct_new_gravity_source() 10 0.02008 0.02285 0.02397 0.65% VisMF::Write(FabArray) 2 0.01324 0.01383 0.01662 0.45% Castro::apply_source_to_state() 20 0.008681 0.01448 0.01654 0.45% MultiFab::Saxpy() 20 0.008655 0.01444 0.01648 0.45% Castro::post_timestep() 10 0.01482 0.01577 0.01615 0.44% FabArray::setDomainBndry() 41 0.005017 0.0105 0.01269 0.35% Castro::check_for_nan() 20 0.009443 0.01124 0.01243 0.34% MultiFab::contains_nan() 20 0.009424 0.01121 0.01241 0.34% Castro::Castro() 1 0.01093 0.0113 0.01213 0.33% Castro::construct_old_source() 50 0.00496 0.01013 0.01189 0.32% Castro::construct_old_gravity_source() 10 0.004933 0.01006 0.01181 0.32% Castro::initMFs() 1 0.006786 0.007256 0.008623 0.23% Castro::computeNewDt() 9 0.007095 0.007116 0.007124 0.19% Castro::enforce_min_density() 62 0.005835 0.006652 0.006986 0.19% AmrLevel::AmrLevel(dm) 1 0.005641 0.005877 0.006477 0.18% StateData::define() 4 0.005618 0.005853 0.006453 0.18% Castro::swap_state_time_levels() 10 0.00336 0.004452 0.004698 0.13% Castro::buildMetrics() 1 0.001717 0.001801 0.002024 0.06% Castro::post_regrid() 1 0.001518 0.001566 0.001639 0.04% Castro::finalize_do_advance() 10 0.00064 0.001403 0.0016 0.04% Amr::InitAmr() 1 0.0002768 0.0003078 0.000436 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.294e-05 0.0001527 0.0001818 0.00% DistributionMapping::LeastUsedCPUs() 1 8.104e-06 0.0001466 0.0001739 0.00% FabArrayBase::getCPC() 41 7.02e-05 8.452e-05 9.813e-05 0.00% Castro::enforce_consistent_e() 1 7.692e-05 8.455e-05 9.24e-05 0.00% Amr::writeSmallPlotFile() 1 3.009e-05 6.152e-05 8.663e-05 0.00% Castro::finalize_advance() 10 5.367e-05 6.388e-05 7.189e-05 0.00% FabArrayBase::CPC::define() 2 2.206e-05 2.643e-05 3.337e-05 0.00% Castro::enforce_speed_limit() 62 2.044e-05 2.562e-05 2.818e-05 0.00% Gravity::swapTimeLevels() 10 5.929e-06 1.244e-05 1.518e-05 0.00% Gravity::set_mass_offset() 10 6.489e-06 1e-05 1.458e-05 0.00% Castro::create_source_corrector() 10 5.544e-06 1.065e-05 1.322e-05 0.00% Castro::FluxRegCrseInit 10 5.284e-06 8.559e-06 1.015e-05 0.00% Amr::initSubcycle() 1 8.034e-06 8.752e-06 9.575e-06 0.00% Castro::retry_advance_ctu() 10 3.954e-06 6.081e-06 6.997e-06 0.00% Castro::FluxRegFineAdd() 10 1.704e-06 2.325e-06 2.712e-06 0.00% DistributionMapping::Distribute() 1 9.37e-07 1.134e-06 1.298e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-1-g94693291667b) finalized