MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-2-g7ede2a285482) initialized Starting run at 21:57:25 UTC on 2022-08-03. Successfully read inputs file ... Castro git describe: 22.08-1-g4c16aad67 AMReX git describe: 22.08-2-g7ede2a285 Microphysics git describe: 22.08 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016423402 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.367098926 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.346032601 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.344058652 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342839695 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.353677702 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.351950222 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338354782 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.33794915 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.337821454 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.336877043 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.04850335 seconds Ending run at 21:57:29 UTC on 2022-08-03. Run time = 3.708756609 Run time without initialization = 3.512980198 Average number of zones advanced per microsecond: 0.746 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.706 ... 3.708 ... 3.709 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1311 2.4049 2.5169 67.86% Castro::do_advance_ctu() 10 0.0426 0.1557 0.4321 11.65% Gravity::make_radial_gravity() 21 0.3332 0.3509 0.3751 10.11% Castro::initData() 1 0.03772 0.07939 0.1265 3.41% FabArray::ParallelCopy_finish() 41 0.04652 0.06493 0.1196 3.22% Castro::estTimeStep() 21 0.04004 0.07723 0.1185 3.20% FabArray::setVal() 143 0.06266 0.07036 0.07264 1.96% Amr::writePlotFile() 2 0.04869 0.05199 0.0532 1.43% Castro::reset_internal_energy(Fab) 1008 0.04732 0.04856 0.05107 1.38% FabArray::ParallelCopy_nowait() 41 0.02939 0.04507 0.05053 1.36% StateData::FillBoundary(geom) 41 0.03613 0.04187 0.04565 1.23% Castro::normalize_species() 62 0.04032 0.04146 0.04214 1.14% FillPatchIterator::Initialize 41 0.02468 0.03615 0.0404 1.09% Gravity::interpolate_monopole_grav() 21 0.02632 0.02752 0.02809 0.76% Castro::construct_new_gravity_source() 10 0.02004 0.02286 0.02394 0.65% Castro::expand_state() 10 0.009934 0.01864 0.02222 0.60% Castro::computeTemp() 63 0.01631 0.018 0.02011 0.54% Castro::initialize_do_advance() 10 0.01019 0.0175 0.01987 0.54% VisMF::Write(FabArray) 2 0.0132 0.01379 0.01647 0.44% MultiFab::Saxpy() 20 0.008783 0.0143 0.01624 0.44% MultiFab::contains_nan() 20 0.009658 0.0112 0.01338 0.36% Gravity::get_new_grav_vector() 11 0.007646 0.01129 0.01257 0.34% FabArray::setDomainBndry() 41 0.004879 0.01048 0.01254 0.34% Castro::construct_old_gravity_source() 10 0.004904 0.01004 0.01183 0.32% Castro::initialize_advance() 10 0.01035 0.01071 0.01142 0.31% Gravity::get_old_grav_vector() 10 0.005695 0.009477 0.01101 0.30% Castro::initMFs() 1 0.006686 0.007167 0.008155 0.22% Castro::construct_new_source() 50 0.004688 0.006503 0.007283 0.20% main() 1 0.004431 0.00662 0.007112 0.19% StateData::define() 4 0.005514 0.005891 0.006462 0.17% Castro::enforce_min_density() 62 0.005162 0.006033 0.006392 0.17% Castro::swap_state_time_levels() 10 0.003289 0.004399 0.004763 0.13% Amr::coarseTimeStep() 10 0.0008592 0.001686 0.002831 0.08% Castro::finalize_do_advance() 10 0.0007717 0.001624 0.001879 0.05% Castro::buildMetrics() 1 0.001564 0.001669 0.001835 0.05% Amr::timeStep() 10 0.0001628 0.0002295 0.0005651 0.02% Amr::InitAmr() 1 0.000274 0.0002982 0.0003986 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002832 0.0002912 0.000301 0.01% Castro::clean_state() 62 0.0001482 0.0001648 0.0001963 0.01% StateDataPhysBCFunct::() 41 0.0001045 0.0001213 0.0001374 0.00% DistributionMapping::LeastUsedCPUs() 1 7.921e-06 0.0001066 0.0001343 0.00% Castro::enforce_consistent_e() 1 7.836e-05 8.693e-05 9.966e-05 0.00% Castro::construct_old_source() 50 2.918e-05 7.311e-05 9.418e-05 0.00% FabArray::ParallelCopy() 41 6.081e-05 8.152e-05 9.238e-05 0.00% Castro::Castro() 1 5.076e-05 6.904e-05 8.75e-05 0.00% Castro::do_new_sources() 10 3.862e-05 6.616e-05 7.996e-05 0.00% FabArrayBase::getCPC() 41 5.291e-05 6.669e-05 7.91e-05 0.00% Amr::FinalizeInit() 1 4.192e-06 1.373e-05 7.885e-05 0.00% Castro::do_old_sources() 10 3.573e-05 6.533e-05 7.773e-05 0.00% FillPatchSingleLevel 41 5.365e-05 6.713e-05 7.416e-05 0.00% Amr::writeSmallPlotFile() 1 2.768e-05 5.25e-05 6.962e-05 0.00% Castro::construct_old_gravity() 10 3.196e-05 5.325e-05 6.589e-05 0.00% Castro::apply_source_to_state() 20 3.136e-05 4.839e-05 6.134e-05 0.00% Castro::subcycle_advance_ctu() 10 2.953e-05 4.634e-05 5.791e-05 0.00% Castro::finalize_advance() 10 4.854e-05 5.308e-05 5.602e-05 0.00% Castro::construct_new_gravity() 10 3.635e-05 4.429e-05 5.401e-05 0.00% Castro::advance() 10 3.073e-05 4.226e-05 4.991e-05 0.00% FabArrayBase::CPC::define() 2 2.332e-05 2.846e-05 4.605e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.876e-05 2.343e-05 3.133e-05 0.00% Castro::enforce_speed_limit() 62 2.308e-05 2.679e-05 3.061e-05 0.00% Amr::defBaseLevel() 1 1.729e-05 2.143e-05 3.005e-05 0.00% Castro::check_for_nan() 20 1.867e-05 2.38e-05 2.771e-05 0.00% Castro::post_timestep() 10 1.479e-05 1.842e-05 2.716e-05 0.00% Gravity::swapTimeLevels() 10 6.051e-06 1.273e-05 1.733e-05 0.00% Castro::create_source_corrector() 10 6.536e-06 1.048e-05 1.309e-05 0.00% Gravity::set_mass_offset() 10 6.655e-06 9.117e-06 1.164e-05 0.00% Castro::computeNewDt() 9 7.352e-06 9.423e-06 1.071e-05 0.00% Castro::FluxRegCrseInit 10 6.731e-06 8.494e-06 1.039e-05 0.00% Amr::initSubcycle() 1 8.238e-06 9.213e-06 1.001e-05 0.00% Castro::post_init() 1 3.278e-06 4.569e-06 9.261e-06 0.00% Amr::InitializeInit() 1 1.879e-06 3.939e-06 6.887e-06 0.00% Castro::retry_advance_ctu() 10 4.095e-06 5.452e-06 6.162e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.488e-06 4.469e-06 6.031e-06 0.00% Castro::post_regrid() 1 1.745e-06 2.743e-06 4.117e-06 0.00% Castro::computeInitialDt() 2 3.288e-06 3.607e-06 3.939e-06 0.00% Castro::FluxRegFineAdd() 10 1.934e-06 2.487e-06 3.174e-06 0.00% Amr::init() 1 1.48e-06 1.93e-06 2.345e-06 0.00% Amr::initialInit() 1 1.112e-06 1.412e-06 1.812e-06 0.00% DistributionMapping::Distribute() 1 8.92e-07 1.197e-06 1.739e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.706 3.708 3.709 100.00% Amr::coarseTimeStep() 10 3.457 3.457 3.457 93.22% Amr::timeStep() 10 3.447 3.448 3.449 92.99% Castro::advance() 10 3.431 3.432 3.433 92.55% Castro::subcycle_advance_ctu() 10 3.357 3.359 3.361 90.62% Castro::do_advance_ctu() 10 3.357 3.359 3.361 90.62% Castro::construct_ctu_hydro_source() 10 2.131 2.405 2.517 67.86% Gravity::make_radial_gravity() 21 0.3332 0.3509 0.3751 10.11% Gravity::get_new_grav_vector() 11 0.2265 0.2317 0.2339 6.31% Castro::construct_old_gravity() 10 0.1953 0.2107 0.2286 6.16% Gravity::get_old_grav_vector() 10 0.1944 0.2099 0.228 6.15% FillPatchIterator::Initialize 41 0.1913 0.1989 0.215 5.80% Castro::construct_new_gravity() 10 0.2011 0.2051 0.2065 5.57% Amr::init() 1 0.1952 0.1953 0.1954 5.27% Castro::initialize_do_advance() 10 0.1644 0.1797 0.1895 5.11% FillPatchSingleLevel 41 0.1392 0.1522 0.1854 5.00% Amr::initialInit() 1 0.1775 0.1781 0.1791 4.83% FabArray::ParallelCopy() 41 0.09671 0.1102 0.1491 4.02% Amr::InitializeInit() 1 0.05795 0.1004 0.1485 4.00% Amr::defBaseLevel() 1 0.05795 0.1004 0.1485 4.00% Castro::expand_state() 10 0.1253 0.1325 0.1398 3.77% Castro::initData() 1 0.04167 0.08322 0.1301 3.51% Amr::FinalizeInit() 1 0.03058 0.07778 0.1196 3.23% FabArray::ParallelCopy_finish() 41 0.04652 0.06493 0.1196 3.22% Castro::estTimeStep() 21 0.04004 0.07723 0.1185 3.20% Castro::clean_state() 62 0.1101 0.1136 0.1179 3.18% Castro::computeInitialDt() 2 0.001607 0.04977 0.09222 2.49% Castro::initialize_advance() 10 0.0706 0.07282 0.07488 2.02% FabArray::setVal() 143 0.06266 0.07036 0.07264 1.96% Castro::computeTemp() 63 0.06456 0.06686 0.07148 1.93% Amr::writePlotFile() 2 0.06482 0.06578 0.06644 1.79% Castro::do_new_sources() 10 0.05367 0.06271 0.06488 1.75% Castro::reset_internal_energy(MultiFab) 63 0.04761 0.04885 0.05137 1.39% Castro::reset_internal_energy(Fab) 1008 0.04732 0.04856 0.05107 1.38% FabArray::ParallelCopy_nowait() 41 0.0295 0.04517 0.05062 1.36% Castro::do_old_sources() 10 0.03294 0.04476 0.04905 1.32% StateDataPhysBCFunct::() 41 0.03624 0.04199 0.04577 1.23% StateData::FillBoundary(geom) 41 0.03613 0.04187 0.04565 1.23% Castro::normalize_species() 62 0.04032 0.04146 0.04214 1.14% Castro::construct_new_source() 50 0.02473 0.02936 0.03076 0.83% Castro::post_init() 1 0.02673 0.02737 0.0284 0.77% Gravity::interpolate_monopole_grav() 21 0.02632 0.02752 0.02809 0.76% Castro::construct_new_gravity_source() 10 0.02004 0.02286 0.02394 0.65% VisMF::Write(FabArray) 2 0.0132 0.01379 0.01647 0.44% Castro::apply_source_to_state() 20 0.008815 0.01435 0.0163 0.44% MultiFab::Saxpy() 20 0.008783 0.0143 0.01624 0.44% Castro::post_timestep() 10 0.01447 0.01533 0.01601 0.43% Castro::check_for_nan() 20 0.009679 0.01123 0.0134 0.36% MultiFab::contains_nan() 20 0.009658 0.0112 0.01338 0.36% FabArray::setDomainBndry() 41 0.004879 0.01048 0.01254 0.34% Castro::Castro() 1 0.01056 0.0111 0.012 0.32% Castro::construct_old_source() 50 0.004934 0.01012 0.01192 0.32% Castro::construct_old_gravity_source() 10 0.004904 0.01004 0.01183 0.32% Castro::initMFs() 1 0.006686 0.007167 0.008155 0.22% Castro::computeNewDt() 9 0.006961 0.006975 0.006993 0.19% AmrLevel::AmrLevel(dm) 1 0.005534 0.005914 0.006481 0.17% StateData::define() 4 0.005514 0.005891 0.006462 0.17% Castro::enforce_min_density() 62 0.005162 0.006033 0.006392 0.17% Castro::swap_state_time_levels() 10 0.003289 0.004399 0.004763 0.13% Castro::buildMetrics() 1 0.001686 0.0018 0.001978 0.05% Castro::finalize_do_advance() 10 0.0007717 0.001624 0.001879 0.05% Castro::post_regrid() 1 0.001508 0.001563 0.001623 0.04% Amr::InitAmr() 1 0.0002827 0.0003074 0.0004069 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.234e-05 0.0001123 0.000142 0.00% DistributionMapping::LeastUsedCPUs() 1 7.921e-06 0.0001066 0.0001343 0.00% FabArrayBase::getCPC() 41 7.623e-05 9.516e-05 0.0001078 0.00% Castro::enforce_consistent_e() 1 7.836e-05 8.693e-05 9.966e-05 0.00% Amr::writeSmallPlotFile() 1 2.768e-05 5.25e-05 6.962e-05 0.00% Castro::finalize_advance() 10 5.813e-05 6.406e-05 6.757e-05 0.00% FabArrayBase::CPC::define() 2 2.332e-05 2.846e-05 4.605e-05 0.00% Castro::enforce_speed_limit() 62 2.308e-05 2.679e-05 3.061e-05 0.00% Gravity::swapTimeLevels() 10 6.051e-06 1.273e-05 1.733e-05 0.00% Castro::create_source_corrector() 10 6.536e-06 1.048e-05 1.309e-05 0.00% Gravity::set_mass_offset() 10 6.655e-06 9.117e-06 1.164e-05 0.00% Castro::FluxRegCrseInit 10 6.731e-06 8.494e-06 1.039e-05 0.00% Amr::initSubcycle() 1 8.238e-06 9.213e-06 1.001e-05 0.00% Castro::retry_advance_ctu() 10 4.095e-06 5.452e-06 6.162e-06 0.00% Castro::FluxRegFineAdd() 10 1.934e-06 2.487e-06 3.174e-06 0.00% DistributionMapping::Distribute() 1 8.92e-07 1.197e-06 1.739e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-2-g7ede2a285482) finalized