MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-1-g94693291667b) initialized Starting run at 05:39:37 UTC on 2022-08-03. Successfully read inputs file ... Castro git describe: 22.08 AMReX git describe: 22.08-1-g946932916 Microphysics git describe: 22.08 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015392591 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.367366175 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.346701159 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.345196582 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.345312358 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.356031842 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.352050764 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338578981 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.33973086 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.351171457 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.335664716 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.0114111 seconds Ending run at 05:39:41 UTC on 2022-08-03. Run time = 3.679083488 Run time without initialization = 3.497316317 Average number of zones advanced per microsecond: 0.750 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.676 ... 3.678 ... 3.679 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1667 2.4119 2.5167 68.40% Castro::do_advance_ctu() 10 0.02975 0.1349 0.3837 10.43% Gravity::make_radial_gravity() 21 0.3581 0.3677 0.3804 10.34% Castro::initData() 1 0.0387 0.07893 0.1152 3.13% FabArray::ParallelCopy_finish() 41 0.04869 0.0646 0.106 2.88% Castro::estTimeStep() 21 0.02604 0.0643 0.1041 2.83% FabArray::setVal() 143 0.06952 0.07344 0.07531 2.05% Castro::reset_internal_energy(Fab) 1008 0.04884 0.05076 0.05264 1.43% FabArray::ParallelCopy_nowait() 41 0.03363 0.04577 0.0511 1.39% StateData::FillBoundary(geom) 41 0.03827 0.04298 0.04614 1.25% Castro::normalize_species() 62 0.04078 0.0422 0.04318 1.17% FillPatchIterator::Initialize 41 0.02555 0.03682 0.04106 1.12% Gravity::interpolate_monopole_grav() 21 0.02622 0.0276 0.02836 0.77% Castro::construct_new_gravity_source() 10 0.02355 0.02424 0.02502 0.68% Castro::expand_state() 10 0.01342 0.02011 0.02362 0.64% Castro::computeTemp() 63 0.01802 0.01939 0.02067 0.56% Castro::initialize_do_advance() 10 0.01318 0.01801 0.02014 0.55% MultiFab::Saxpy() 20 0.0115 0.01508 0.01659 0.45% VisMF::Write(FabArray) 2 0.01235 0.01316 0.01598 0.43% Amr::writePlotFile() 2 0.01105 0.01381 0.01467 0.40% Gravity::get_new_grav_vector() 11 0.01044 0.01217 0.01331 0.36% FabArray::setDomainBndry() 41 0.005976 0.01077 0.01275 0.35% MultiFab::contains_nan() 20 0.0108 0.01169 0.01271 0.35% Castro::construct_old_gravity_source() 10 0.007238 0.01089 0.0127 0.35% Castro::initialize_advance() 10 0.01098 0.01115 0.01184 0.32% Gravity::get_old_grav_vector() 10 0.006372 0.009699 0.01107 0.30% Castro::initMFs() 1 0.00673 0.007053 0.008679 0.24% main() 1 0.004422 0.006755 0.00747 0.20% Castro::enforce_min_density() 62 0.006653 0.006982 0.007407 0.20% Castro::construct_new_source() 50 0.005267 0.006729 0.0074 0.20% StateData::define() 4 0.005656 0.005798 0.006304 0.17% Castro::swap_state_time_levels() 10 0.003549 0.00471 0.004897 0.13% Amr::coarseTimeStep() 10 0.001302 0.002352 0.003431 0.09% Castro::finalize_do_advance() 10 0.001609 0.001811 0.001991 0.05% Castro::buildMetrics() 1 0.001616 0.001661 0.001858 0.05% Amr::InitAmr() 1 0.000276 0.0003091 0.0004659 0.01% Amr::timeStep() 10 0.0001791 0.0002388 0.0004621 0.01% Castro::reset_internal_energy(MultiFab) 63 0.00029 0.0003147 0.0003475 0.01% DistributionMapping::LeastUsedCPUs() 1 7.316e-06 0.0001941 0.0002269 0.01% Castro::clean_state() 62 0.0001475 0.0001728 0.0002153 0.01% StateDataPhysBCFunct::() 41 9.351e-05 0.0001361 0.0001577 0.00% Amr::FinalizeInit() 1 4.012e-06 1.753e-05 0.0001086 0.00% Castro::enforce_consistent_e() 1 8.253e-05 9.105e-05 9.795e-05 0.00% FabArray::ParallelCopy() 41 7.63e-05 8.701e-05 9.731e-05 0.00% Castro::do_new_sources() 10 5.171e-05 7.557e-05 9.045e-05 0.00% Castro::Castro() 1 5.499e-05 7.453e-05 8.98e-05 0.00% Castro::construct_old_source() 50 4.89e-05 7.358e-05 8.694e-05 0.00% Castro::do_old_sources() 10 4.723e-05 7.346e-05 8.573e-05 0.00% FabArrayBase::getCPC() 41 5.599e-05 6.494e-05 8.527e-05 0.00% FillPatchSingleLevel 41 6.569e-05 7.218e-05 8.044e-05 0.00% Castro::advance() 10 3.465e-05 4.814e-05 6.937e-05 0.00% Castro::construct_old_gravity() 10 3.266e-05 5.194e-05 6.515e-05 0.00% Amr::writeSmallPlotFile() 1 2.483e-05 4.814e-05 6.515e-05 0.00% Castro::finalize_advance() 10 5.232e-05 5.684e-05 6.321e-05 0.00% Castro::apply_source_to_state() 20 4.036e-05 4.935e-05 5.973e-05 0.00% Castro::subcycle_advance_ctu() 10 3.562e-05 4.432e-05 5.693e-05 0.00% Castro::construct_new_gravity() 10 3.99e-05 4.594e-05 5.506e-05 0.00% FabArrayBase::CPC::define() 2 2.308e-05 2.846e-05 3.642e-05 0.00% Amr::defBaseLevel() 1 1.756e-05 2.318e-05 3.327e-05 0.00% Castro::enforce_speed_limit() 62 2.288e-05 2.673e-05 3.139e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.714e-05 2.035e-05 2.598e-05 0.00% Castro::check_for_nan() 20 1.955e-05 2.384e-05 2.572e-05 0.00% Castro::post_timestep() 10 1.373e-05 1.604e-05 2.258e-05 0.00% Castro::FluxRegCrseInit 10 5.768e-06 1.036e-05 1.629e-05 0.00% Gravity::swapTimeLevels() 10 8.798e-06 1.274e-05 1.583e-05 0.00% Castro::create_source_corrector() 10 7.122e-06 1.065e-05 1.414e-05 0.00% Castro::retry_advance_ctu() 10 4.727e-06 6.748e-06 1.177e-05 0.00% Castro::computeNewDt() 9 6.717e-06 9.347e-06 1.051e-05 0.00% Gravity::set_mass_offset() 10 6.654e-06 8.956e-06 1.046e-05 0.00% Amr::initSubcycle() 1 8.228e-06 8.679e-06 9.556e-06 0.00% Amr::InitializeInit() 1 1.915e-06 3.269e-06 7.421e-06 0.00% Castro::FluxRegFineAdd() 10 1.805e-06 3.07e-06 6.962e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.65e-06 4.207e-06 5.573e-06 0.00% Castro::computeInitialDt() 2 2.828e-06 3.85e-06 5.169e-06 0.00% Castro::post_init() 1 3.23e-06 3.986e-06 5.137e-06 0.00% Castro::post_regrid() 1 1.87e-06 2.681e-06 3.724e-06 0.00% Amr::init() 1 1.483e-06 1.907e-06 2.653e-06 0.00% Amr::initialInit() 1 1.113e-06 1.611e-06 2.447e-06 0.00% DistributionMapping::Distribute() 1 8.6e-07 9.74e-07 1.162e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.676 3.678 3.679 100.00% Amr::coarseTimeStep() 10 3.479 3.479 3.479 94.55% Amr::timeStep() 10 3.467 3.468 3.469 94.29% Castro::advance() 10 3.452 3.452 3.452 93.83% Castro::subcycle_advance_ctu() 10 3.373 3.377 3.38 91.87% Castro::do_advance_ctu() 10 3.373 3.377 3.38 91.86% Castro::construct_ctu_hydro_source() 10 2.167 2.412 2.517 68.40% Gravity::make_radial_gravity() 21 0.3581 0.3677 0.3804 10.34% Castro::construct_old_gravity() 10 0.2193 0.2277 0.2393 6.50% Gravity::get_old_grav_vector() 10 0.2185 0.2269 0.2386 6.49% Gravity::get_new_grav_vector() 11 0.2275 0.2322 0.235 6.39% FillPatchIterator::Initialize 41 0.1945 0.2013 0.2109 5.73% Castro::construct_new_gravity() 10 0.2027 0.2066 0.2088 5.67% Castro::initialize_do_advance() 10 0.173 0.1848 0.1914 5.20% Amr::init() 1 0.1812 0.1813 0.1814 4.93% FillPatchSingleLevel 41 0.1426 0.1537 0.1788 4.86% Amr::initialInit() 1 0.1656 0.1659 0.166 4.51% Castro::expand_state() 10 0.128 0.1356 0.1411 3.83% FabArray::ParallelCopy() 41 0.09786 0.1105 0.1398 3.80% Amr::InitializeInit() 1 0.06006 0.1006 0.137 3.72% Amr::defBaseLevel() 1 0.06006 0.1006 0.137 3.72% Castro::clean_state() 62 0.115 0.1189 0.1231 3.35% Castro::initData() 1 0.04286 0.08307 0.1193 3.24% FabArray::ParallelCopy_finish() 41 0.04869 0.0646 0.106 2.88% Amr::FinalizeInit() 1 0.02881 0.06529 0.1057 2.87% Castro::estTimeStep() 21 0.02604 0.0643 0.1041 2.83% Castro::computeInitialDt() 2 0.001717 0.03815 0.07866 2.14% Castro::initialize_advance() 10 0.0717 0.07491 0.07846 2.13% FabArray::setVal() 143 0.06952 0.07344 0.07531 2.05% Castro::computeTemp() 63 0.06715 0.07046 0.07364 2.00% Castro::do_new_sources() 10 0.06541 0.06604 0.06698 1.82% Castro::reset_internal_energy(MultiFab) 63 0.04913 0.05107 0.05297 1.44% Castro::reset_internal_energy(Fab) 1008 0.04884 0.05076 0.05264 1.43% Castro::do_old_sources() 10 0.03878 0.04768 0.05255 1.43% FabArray::ParallelCopy_nowait() 41 0.03371 0.04586 0.05121 1.39% StateDataPhysBCFunct::() 41 0.0384 0.04312 0.04629 1.26% StateData::FillBoundary(geom) 41 0.03827 0.04298 0.04614 1.25% Castro::normalize_species() 62 0.04078 0.0422 0.04318 1.17% Castro::construct_new_source() 50 0.02972 0.03097 0.03241 0.88% Gravity::interpolate_monopole_grav() 21 0.02622 0.0276 0.02836 0.77% Amr::writePlotFile() 2 0.02682 0.02698 0.02706 0.74% Castro::post_init() 1 0.02633 0.02646 0.02668 0.73% Castro::construct_new_gravity_source() 10 0.02355 0.02424 0.02502 0.68% Castro::post_timestep() 10 0.01509 0.01592 0.01673 0.45% Castro::apply_source_to_state() 20 0.01154 0.01513 0.01664 0.45% MultiFab::Saxpy() 20 0.0115 0.01508 0.01659 0.45% VisMF::Write(FabArray) 2 0.01235 0.01316 0.01598 0.43% Castro::construct_old_source() 50 0.007289 0.01096 0.01278 0.35% FabArray::setDomainBndry() 41 0.005976 0.01077 0.01275 0.35% Castro::check_for_nan() 20 0.01082 0.01171 0.01274 0.35% MultiFab::contains_nan() 20 0.0108 0.01169 0.01271 0.35% Castro::construct_old_gravity_source() 10 0.007238 0.01089 0.0127 0.35% Castro::Castro() 1 0.01113 0.01145 0.0124 0.34% Castro::initMFs() 1 0.00673 0.007053 0.008679 0.24% Castro::enforce_min_density() 62 0.006653 0.006982 0.007407 0.20% Castro::computeNewDt() 9 0.007179 0.007185 0.007199 0.20% AmrLevel::AmrLevel(dm) 1 0.005679 0.005818 0.006326 0.17% StateData::define() 4 0.005656 0.005798 0.006304 0.17% Castro::swap_state_time_levels() 10 0.003549 0.00471 0.004897 0.13% Castro::buildMetrics() 1 0.001732 0.001786 0.002001 0.05% Castro::finalize_do_advance() 10 0.001609 0.001811 0.001991 0.05% Castro::post_regrid() 1 0.001554 0.001605 0.001634 0.04% Amr::InitAmr() 1 0.0002856 0.0003178 0.0004754 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.232e-05 0.0001993 0.0002336 0.01% DistributionMapping::LeastUsedCPUs() 1 7.316e-06 0.0001941 0.0002269 0.01% FabArrayBase::getCPC() 41 8.092e-05 9.34e-05 0.0001171 0.00% Castro::enforce_consistent_e() 1 8.253e-05 9.105e-05 9.795e-05 0.00% Castro::finalize_advance() 10 6.417e-05 7.027e-05 7.71e-05 0.00% Amr::writeSmallPlotFile() 1 2.483e-05 4.814e-05 6.515e-05 0.00% FabArrayBase::CPC::define() 2 2.308e-05 2.846e-05 3.642e-05 0.00% Castro::enforce_speed_limit() 62 2.288e-05 2.673e-05 3.139e-05 0.00% Castro::FluxRegCrseInit 10 5.768e-06 1.036e-05 1.629e-05 0.00% Gravity::swapTimeLevels() 10 8.798e-06 1.274e-05 1.583e-05 0.00% Castro::create_source_corrector() 10 7.122e-06 1.065e-05 1.414e-05 0.00% Castro::retry_advance_ctu() 10 4.727e-06 6.748e-06 1.177e-05 0.00% Gravity::set_mass_offset() 10 6.654e-06 8.956e-06 1.046e-05 0.00% Amr::initSubcycle() 1 8.228e-06 8.679e-06 9.556e-06 0.00% Castro::FluxRegFineAdd() 10 1.805e-06 3.07e-06 6.962e-06 0.00% DistributionMapping::Distribute() 1 8.6e-07 9.74e-07 1.162e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-1-g94693291667b) finalized