MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-3-g9ed4f5955b1d) initialized Starting run at 05:39:32 UTC on 2022-08-04. Successfully read inputs file ... Castro git describe: 22.08-1-g4c16aad67 AMReX git describe: 22.08-3-g9ed4f5955 Microphysics git describe: 22.08 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016040181 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.35625814 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.344763851 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.341748639 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.341536098 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.353832 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.354100667 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.336611255 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.33860158 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.337397801 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.338211502 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.054252951 seconds Ending run at 05:39:35 UTC on 2022-08-04. Run time = 3.73843407 Run time without initialization = 3.50484695 Average number of zones advanced per microsecond: 0.748 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.736 ... 3.738 ... 3.738 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1402 2.3987 2.5115 67.18% Castro::do_advance_ctu() 10 0.03532 0.1501 0.4109 10.99% Gravity::make_radial_gravity() 21 0.3393 0.3527 0.3789 10.13% Castro::initData() 1 0.03822 0.09251 0.1594 4.26% Castro::estTimeStep() 21 0.02666 0.1011 0.1562 4.18% FabArray::ParallelCopy_finish() 41 0.04593 0.06405 0.125 3.34% FabArray::setVal() 143 0.05784 0.06748 0.07026 1.88% VisMF::Write(FabArray) 2 0.01349 0.01961 0.06024 1.61% Amr::writePlotFile() 2 0.01029 0.05099 0.05716 1.53% Castro::reset_internal_energy(Fab) 1008 0.04723 0.04995 0.05258 1.41% FabArray::ParallelCopy_nowait() 41 0.02778 0.04448 0.05016 1.34% StateData::FillBoundary(geom) 41 0.03533 0.04173 0.0469 1.25% Castro::normalize_species() 62 0.04018 0.0414 0.04223 1.13% FillPatchIterator::Initialize 41 0.02446 0.03603 0.04049 1.08% Gravity::interpolate_monopole_grav() 21 0.02608 0.02738 0.02789 0.75% Castro::construct_new_gravity_source() 10 0.0201 0.02286 0.02366 0.63% Castro::expand_state() 10 0.009914 0.01888 0.02231 0.60% Castro::computeTemp() 63 0.01791 0.01905 0.02023 0.54% Castro::initialize_do_advance() 10 0.01031 0.01735 0.01957 0.52% MultiFab::Saxpy() 20 0.00875 0.01414 0.01615 0.43% Gravity::get_new_grav_vector() 11 0.007446 0.01139 0.01293 0.35% MultiFab::contains_nan() 20 0.009415 0.01105 0.01215 0.32% FabArray::setDomainBndry() 41 0.004845 0.01031 0.01213 0.32% Castro::construct_old_gravity_source() 10 0.004958 0.01011 0.01192 0.32% Gravity::get_old_grav_vector() 10 0.0056 0.009357 0.01137 0.30% Castro::initialize_advance() 10 0.003212 0.008789 0.01064 0.28% Castro::initMFs() 1 0.006618 0.007906 0.01001 0.27% StateData::define() 4 0.005594 0.006579 0.008259 0.22% Castro::enforce_min_density() 62 0.005962 0.006753 0.007294 0.20% Castro::construct_new_source() 50 0.00489 0.006476 0.007121 0.19% main() 1 0.004406 0.006428 0.006886 0.18% Castro::swap_state_time_levels() 10 0.003309 0.004446 0.004974 0.13% Amr::coarseTimeStep() 10 0.0007461 0.001912 0.003694 0.10% Castro::buildMetrics() 1 0.001585 0.001868 0.002353 0.06% Castro::finalize_do_advance() 10 0.0006421 0.001645 0.001975 0.05% Amr::InitAmr() 1 0.00027 0.000358 0.0005032 0.01% Amr::timeStep() 10 0.0001762 0.0002404 0.000485 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002945 0.0003094 0.0003242 0.01% DistributionMapping::LeastUsedCPUs() 1 7.41e-06 0.0001852 0.0002842 0.01% Castro::clean_state() 62 0.0001443 0.0001699 0.0002047 0.01% StateDataPhysBCFunct::() 41 8.913e-05 0.0001261 0.0001453 0.00% Castro::enforce_consistent_e() 1 7.678e-05 9.259e-05 0.0001403 0.00% Amr::FinalizeInit() 1 3.141e-06 2.014e-05 0.0001165 0.00% FabArray::ParallelCopy() 41 7.495e-05 8.345e-05 9.492e-05 0.00% Castro::construct_old_source() 50 3.867e-05 7.11e-05 9.086e-05 0.00% Castro::do_new_sources() 10 4.66e-05 7.065e-05 8.731e-05 0.00% Castro::Castro() 1 5.578e-05 6.477e-05 8.293e-05 0.00% Castro::do_old_sources() 10 4.432e-05 6.766e-05 8.004e-05 0.00% FillPatchSingleLevel 41 6.378e-05 6.837e-05 7.753e-05 0.00% Castro::subcycle_advance_ctu() 10 3.504e-05 5.072e-05 7.59e-05 0.00% Amr::writeSmallPlotFile() 1 2.545e-05 6.057e-05 6.819e-05 0.00% Castro::apply_source_to_state() 20 3.361e-05 5.082e-05 6.756e-05 0.00% FabArrayBase::getCPC() 41 5.16e-05 5.797e-05 6.669e-05 0.00% Castro::construct_old_gravity() 10 3.42e-05 5.263e-05 6.265e-05 0.00% Castro::finalize_advance() 10 4.627e-05 5.437e-05 5.776e-05 0.00% Amr::defBaseLevel() 1 3.295e-05 4.166e-05 5.772e-05 0.00% Castro::construct_new_gravity() 10 3.955e-05 4.505e-05 5.07e-05 0.00% Castro::advance() 10 3.639e-05 4.49e-05 5.015e-05 0.00% Castro::enforce_speed_limit() 62 2.239e-05 2.84e-05 3.655e-05 0.00% FabArrayBase::CPC::define() 2 2.16e-05 2.612e-05 2.998e-05 0.00% Gravity::swapTimeLevels() 10 7.251e-06 1.461e-05 2.772e-05 0.00% Castro::check_for_nan() 20 1.901e-05 2.261e-05 2.576e-05 0.00% Castro::post_timestep() 10 1.385e-05 1.682e-05 2.429e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.181e-06 1.418e-05 2.329e-05 0.00% Amr::initSubcycle() 1 8.129e-06 1.029e-05 1.45e-05 0.00% Castro::create_source_corrector() 10 6.536e-06 1.114e-05 1.359e-05 0.00% Gravity::set_mass_offset() 10 6.227e-06 9.33e-06 1.099e-05 0.00% Castro::computeNewDt() 9 8.134e-06 9.59e-06 1.089e-05 0.00% Castro::FluxRegCrseInit 10 5.243e-06 8.104e-06 1.034e-05 0.00% Castro::retry_advance_ctu() 10 4.233e-06 6.587e-06 8.563e-06 0.00% Amr::InitializeInit() 1 2.12e-06 3.76e-06 8.041e-06 0.00% Castro::post_regrid() 1 1.797e-06 3.364e-06 6.657e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.448e-06 4.312e-06 5.833e-06 0.00% Castro::post_init() 1 2.994e-06 3.95e-06 5.149e-06 0.00% Castro::computeInitialDt() 2 3.563e-06 3.938e-06 5.04e-06 0.00% Amr::init() 1 1.633e-06 2.271e-06 2.876e-06 0.00% Castro::FluxRegFineAdd() 10 1.634e-06 2.329e-06 2.851e-06 0.00% Amr::initialInit() 1 1.468e-06 1.755e-06 2.111e-06 0.00% DistributionMapping::Distribute() 1 9.62e-07 1.153e-06 1.523e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.736 3.738 3.738 100.00% Amr::coarseTimeStep() 10 3.444 3.444 3.444 92.12% Amr::timeStep() 10 3.432 3.434 3.435 91.88% Castro::advance() 10 3.417 3.418 3.418 91.43% Castro::subcycle_advance_ctu() 10 3.345 3.348 3.358 89.81% Castro::do_advance_ctu() 10 3.345 3.348 3.358 89.81% Castro::construct_ctu_hydro_source() 10 2.14 2.399 2.511 67.18% Gravity::make_radial_gravity() 21 0.3393 0.3527 0.3789 10.13% Gravity::get_new_grav_vector() 11 0.2272 0.2321 0.2339 6.26% Amr::init() 1 0.2329 0.2331 0.2332 6.24% Castro::construct_old_gravity() 10 0.1992 0.2109 0.2317 6.20% Gravity::get_old_grav_vector() 10 0.1983 0.2101 0.2311 6.18% FillPatchIterator::Initialize 41 0.1891 0.197 0.2195 5.87% Amr::initialInit() 1 0.2167 0.2168 0.217 5.80% Castro::construct_new_gravity() 10 0.2006 0.2048 0.2066 5.53% FillPatchSingleLevel 41 0.1373 0.1506 0.1901 5.09% Castro::initialize_do_advance() 10 0.1651 0.1795 0.1868 5.00% Amr::InitializeInit() 1 0.0578 0.1151 0.1862 4.98% Amr::defBaseLevel() 1 0.05779 0.1151 0.1862 4.98% Castro::initData() 1 0.04186 0.09664 0.1637 4.38% Amr::FinalizeInit() 1 0.03053 0.1017 0.1589 4.25% Castro::estTimeStep() 21 0.02666 0.1011 0.1562 4.18% FabArray::ParallelCopy() 41 0.09621 0.1087 0.153 4.09% Castro::expand_state() 10 0.1215 0.132 0.1374 3.67% Castro::computeInitialDt() 2 0.001757 0.07306 0.1304 3.49% FabArray::ParallelCopy_finish() 41 0.04593 0.06405 0.125 3.34% Castro::clean_state() 62 0.1107 0.1165 0.1204 3.22% Castro::computeTemp() 63 0.06546 0.06931 0.07308 1.95% Castro::initialize_advance() 10 0.05911 0.06942 0.07227 1.93% Amr::writePlotFile() 2 0.0705 0.0706 0.07081 1.89% FabArray::setVal() 143 0.05784 0.06748 0.07026 1.88% Castro::do_new_sources() 10 0.05357 0.06276 0.0647 1.73% VisMF::Write(FabArray) 2 0.01349 0.01961 0.06024 1.61% Castro::reset_internal_energy(MultiFab) 63 0.04755 0.05026 0.0529 1.42% Castro::reset_internal_energy(Fab) 1008 0.04723 0.04995 0.05258 1.41% FabArray::ParallelCopy_nowait() 41 0.02786 0.04456 0.05023 1.34% Castro::do_old_sources() 10 0.03323 0.04519 0.04901 1.31% StateDataPhysBCFunct::() 41 0.03545 0.04185 0.04704 1.26% StateData::FillBoundary(geom) 41 0.03533 0.04173 0.0469 1.25% Castro::normalize_species() 62 0.04018 0.0414 0.04223 1.13% Castro::construct_new_source() 50 0.02499 0.02933 0.03031 0.81% Castro::post_init() 1 0.02751 0.02801 0.02822 0.75% Gravity::interpolate_monopole_grav() 21 0.02608 0.02738 0.02789 0.75% Castro::construct_new_gravity_source() 10 0.0201 0.02286 0.02366 0.63% Castro::post_timestep() 10 0.01486 0.01574 0.01661 0.44% Castro::apply_source_to_state() 20 0.008784 0.01419 0.01619 0.43% MultiFab::Saxpy() 20 0.00875 0.01414 0.01615 0.43% Castro::Castro() 1 0.009983 0.01161 0.0142 0.38% Castro::check_for_nan() 20 0.009436 0.01107 0.01217 0.33% MultiFab::contains_nan() 20 0.009415 0.01105 0.01215 0.32% FabArray::setDomainBndry() 41 0.004845 0.01031 0.01213 0.32% Castro::construct_old_source() 50 0.004997 0.01018 0.012 0.32% Castro::construct_old_gravity_source() 10 0.004958 0.01011 0.01192 0.32% Castro::initMFs() 1 0.006618 0.007906 0.01001 0.27% AmrLevel::AmrLevel(dm) 1 0.005601 0.006593 0.008283 0.22% StateData::define() 4 0.005594 0.006579 0.008259 0.22% Castro::enforce_min_density() 62 0.005962 0.006753 0.007294 0.20% Castro::computeNewDt() 9 0.00714 0.007161 0.007172 0.19% Castro::swap_state_time_levels() 10 0.003309 0.004446 0.004974 0.13% Castro::buildMetrics() 1 0.001694 0.002019 0.00258 0.07% Castro::post_regrid() 1 0.001509 0.001611 0.002022 0.05% Castro::finalize_do_advance() 10 0.0006421 0.001645 0.001975 0.05% Amr::InitAmr() 1 0.0002788 0.0003683 0.0005167 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.263e-05 0.0001907 0.0002913 0.01% DistributionMapping::LeastUsedCPUs() 1 7.41e-06 0.0001852 0.0002842 0.01% Castro::enforce_consistent_e() 1 7.678e-05 9.259e-05 0.0001403 0.00% FabArrayBase::getCPC() 41 7.473e-05 8.409e-05 9.667e-05 0.00% Castro::finalize_advance() 10 5.495e-05 6.48e-05 6.967e-05 0.00% Amr::writeSmallPlotFile() 1 2.545e-05 6.057e-05 6.819e-05 0.00% Castro::enforce_speed_limit() 62 2.239e-05 2.84e-05 3.655e-05 0.00% FabArrayBase::CPC::define() 2 2.16e-05 2.612e-05 2.998e-05 0.00% Gravity::swapTimeLevels() 10 7.251e-06 1.461e-05 2.772e-05 0.00% Amr::initSubcycle() 1 8.129e-06 1.029e-05 1.45e-05 0.00% Castro::create_source_corrector() 10 6.536e-06 1.114e-05 1.359e-05 0.00% Gravity::set_mass_offset() 10 6.227e-06 9.33e-06 1.099e-05 0.00% Castro::FluxRegCrseInit 10 5.243e-06 8.104e-06 1.034e-05 0.00% Castro::retry_advance_ctu() 10 4.233e-06 6.587e-06 8.563e-06 0.00% Castro::FluxRegFineAdd() 10 1.634e-06 2.329e-06 2.851e-06 0.00% DistributionMapping::Distribute() 1 9.62e-07 1.153e-06 1.523e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-3-g9ed4f5955b1d) finalized