MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-6-g103db6ebe2b5) initialized Starting run at 05:39:35 UTC on 2022-08-08. Successfully read inputs file ... Castro git describe: 22.08-3-gd86268680 AMReX git describe: 22.08-6-g103db6ebe Microphysics git describe: 22.08-1-gffefdd62 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015988033 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.350915238 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.345725814 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342972624 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342022782 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.354830863 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.352582389 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.340577239 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339454962 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.339281991 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.340154206 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010491717 seconds Ending run at 05:39:39 UTC on 2022-08-08. Run time = 3.672022272 Run time without initialization = 3.46664162 Average number of zones advanced per microsecond: 0.756 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.669 ... 3.671 ... 3.672 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1519 2.4258 2.5163 68.52% Castro::do_advance_ctu() 10 0.03381 0.124 0.4004 10.90% Gravity::make_radial_gravity() 21 0.3381 0.3543 0.3798 10.34% Castro::initData() 1 0.0383 0.08231 0.1352 3.68% FabArray::ParallelCopy_finish() 41 0.04343 0.06628 0.1349 3.67% Castro::estTimeStep() 21 0.02941 0.0837 0.1276 3.48% FabArray::setVal() 143 0.05671 0.0674 0.06976 1.90% Castro::reset_internal_energy(Fab) 1008 0.04738 0.04997 0.0517 1.41% FabArray::ParallelCopy_nowait() 41 0.02733 0.04509 0.05134 1.40% StateData::FillBoundary(geom) 41 0.03585 0.04166 0.0463 1.26% Castro::normalize_species() 62 0.0405 0.04217 0.04274 1.16% FillPatchIterator::Initialize 41 0.02375 0.03609 0.04037 1.10% Gravity::interpolate_monopole_grav() 21 0.02666 0.02755 0.02797 0.76% Castro::construct_new_gravity_source() 10 0.02024 0.02316 0.02416 0.66% Castro::expand_state() 10 0.009572 0.01771 0.02101 0.57% Castro::computeTemp() 63 0.01722 0.01903 0.01983 0.54% Castro::initialize_do_advance() 10 0.00964 0.01734 0.01934 0.53% VisMF::Write(FabArray) 2 0.01289 0.01351 0.01645 0.45% MultiFab::Saxpy() 20 0.008536 0.01445 0.01632 0.44% Amr::writePlotFile() 2 0.01025 0.01348 0.01434 0.39% MultiFab::contains_nan() 20 0.009493 0.01162 0.01355 0.37% Gravity::get_new_grav_vector() 11 0.00753 0.01141 0.0129 0.35% FabArray::setDomainBndry() 41 0.004967 0.01044 0.01249 0.34% Castro::construct_old_gravity_source() 10 0.004953 0.01015 0.01166 0.32% Gravity::get_old_grav_vector() 10 0.00548 0.009443 0.0107 0.29% Castro::initialize_advance() 10 0.003229 0.008817 0.01047 0.29% Castro::enforce_min_density() 62 0.00599 0.006958 0.008081 0.22% Castro::initMFs() 1 0.006715 0.007258 0.008072 0.22% Castro::construct_new_source() 50 0.00482 0.006615 0.00737 0.20% main() 1 0.004157 0.006086 0.006864 0.19% StateData::define() 4 0.005642 0.005964 0.006435 0.18% Castro::swap_state_time_levels() 10 0.003305 0.004398 0.005271 0.14% Amr::coarseTimeStep() 10 0.000916 0.001553 0.003004 0.08% Castro::buildMetrics() 1 0.001561 0.00168 0.001843 0.05% Castro::finalize_do_advance() 10 0.0006645 0.001474 0.001754 0.05% Amr::timeStep() 10 0.0001772 0.0002413 0.0005564 0.02% Amr::InitAmr() 1 0.0002554 0.0002867 0.0003992 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002976 0.0003035 0.0003104 0.01% Castro::clean_state() 62 0.0001483 0.0001686 0.0001904 0.01% DistributionMapping::LeastUsedCPUs() 1 7.449e-06 0.0001272 0.0001665 0.00% StateDataPhysBCFunct::() 41 8.698e-05 0.0001268 0.0001531 0.00% Castro::enforce_consistent_e() 1 7.551e-05 8.807e-05 0.0001182 0.00% Castro::construct_old_source() 50 3.385e-05 8.098e-05 0.0001126 0.00% FabArray::ParallelCopy() 41 6.501e-05 8.595e-05 0.0001009 0.00% Amr::FinalizeInit() 1 3.681e-06 1.616e-05 9.605e-05 0.00% Castro::construct_new_gravity() 10 3.24e-05 5.586e-05 9.333e-05 0.00% Castro::Castro() 1 5.785e-05 6.809e-05 9.165e-05 0.00% Castro::do_old_sources() 10 3.646e-05 6.966e-05 8.748e-05 0.00% Castro::do_new_sources() 10 4.298e-05 6.947e-05 8.422e-05 0.00% FillPatchSingleLevel 41 5.932e-05 6.79e-05 8.019e-05 0.00% Castro::subcycle_advance_ctu() 10 2.924e-05 5.105e-05 7.483e-05 0.00% FabArrayBase::getCPC() 41 4.986e-05 5.871e-05 7.405e-05 0.00% Castro::construct_old_gravity() 10 3.572e-05 5.235e-05 6.818e-05 0.00% Amr::writeSmallPlotFile() 1 3.185e-05 6.033e-05 6.76e-05 0.00% Castro::apply_source_to_state() 20 3.639e-05 5.103e-05 6.197e-05 0.00% Castro::finalize_advance() 10 4.46e-05 5.356e-05 6.049e-05 0.00% Amr::defBaseLevel() 1 3.655e-05 4.473e-05 5.668e-05 0.00% Castro::enforce_speed_limit() 62 2.425e-05 3.181e-05 5.173e-05 0.00% Castro::advance() 10 3.262e-05 4.224e-05 4.81e-05 0.00% FabArrayBase::CPC::define() 2 2.176e-05 2.63e-05 3.421e-05 0.00% Castro::check_for_nan() 20 1.992e-05 2.379e-05 2.869e-05 0.00% Castro::post_timestep() 10 1.357e-05 1.609e-05 2.346e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.814e-06 1.325e-05 1.642e-05 0.00% Gravity::swapTimeLevels() 10 5.704e-06 1.17e-05 1.488e-05 0.00% Castro::create_source_corrector() 10 5.509e-06 1.068e-05 1.458e-05 0.00% Castro::post_init() 1 3.182e-06 5.379e-06 1.217e-05 0.00% Gravity::set_mass_offset() 10 6.515e-06 8.891e-06 1.042e-05 0.00% Castro::FluxRegCrseInit 10 6.108e-06 8.692e-06 1.034e-05 0.00% Amr::initSubcycle() 1 8.139e-06 8.858e-06 9.816e-06 0.00% Castro::computeNewDt() 9 7.349e-06 8.696e-06 9.477e-06 0.00% Amr::InitializeInit() 1 2.174e-06 4.185e-06 8.077e-06 0.00% Castro::retry_advance_ctu() 10 4.379e-06 6.367e-06 8.074e-06 0.00% Amr::initialInit() 1 1.503e-06 2.482e-06 7.816e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.425e-06 4.057e-06 5.283e-06 0.00% Castro::computeInitialDt() 2 3.098e-06 3.359e-06 3.794e-06 0.00% Castro::post_regrid() 1 1.806e-06 2.509e-06 3.251e-06 0.00% Castro::FluxRegFineAdd() 10 2.116e-06 2.42e-06 3.228e-06 0.00% Amr::init() 1 1.7e-06 2.108e-06 2.777e-06 0.00% DistributionMapping::Distribute() 1 9.35e-07 1.032e-06 1.102e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.669 3.671 3.672 100.00% Amr::coarseTimeStep() 10 3.449 3.449 3.449 93.93% Amr::timeStep() 10 3.438 3.44 3.44 93.69% Castro::advance() 10 3.423 3.424 3.424 93.24% Castro::subcycle_advance_ctu() 10 3.352 3.355 3.367 91.68% Castro::do_advance_ctu() 10 3.352 3.355 3.367 91.68% Castro::construct_ctu_hydro_source() 10 2.152 2.426 2.516 68.52% Gravity::make_radial_gravity() 21 0.3381 0.3543 0.3798 10.34% Gravity::get_new_grav_vector() 11 0.2278 0.2337 0.2361 6.43% Castro::construct_old_gravity() 10 0.1957 0.2111 0.2301 6.27% Gravity::get_old_grav_vector() 10 0.1949 0.2103 0.2296 6.25% FillPatchIterator::Initialize 41 0.1884 0.1999 0.2271 6.18% Castro::construct_new_gravity() 10 0.2011 0.2064 0.2084 5.67% Amr::init() 1 0.2048 0.205 0.205 5.58% FillPatchSingleLevel 41 0.1365 0.1534 0.1984 5.40% Castro::initialize_do_advance() 10 0.1705 0.1805 0.1907 5.19% Amr::initialInit() 1 0.1883 0.1886 0.1888 5.14% FabArray::ParallelCopy() 41 0.0938 0.1115 0.1624 4.42% Amr::InitializeInit() 1 0.05932 0.1037 0.1578 4.30% Amr::defBaseLevel() 1 0.05932 0.1037 0.1578 4.30% Castro::expand_state() 10 0.1255 0.1328 0.1411 3.84% Castro::initData() 1 0.04196 0.08633 0.1392 3.79% FabArray::ParallelCopy_finish() 41 0.04343 0.06628 0.1349 3.67% Amr::FinalizeInit() 1 0.03089 0.08488 0.129 3.51% Castro::estTimeStep() 21 0.02941 0.0837 0.1276 3.48% Castro::clean_state() 62 0.1104 0.1177 0.1206 3.28% Castro::computeInitialDt() 2 0.00173 0.05586 0.1002 2.73% Castro::initialize_advance() 10 0.05608 0.06877 0.07216 1.97% Castro::computeTemp() 63 0.06491 0.0693 0.07146 1.95% FabArray::setVal() 143 0.05671 0.0674 0.06976 1.90% Castro::do_new_sources() 10 0.05419 0.06362 0.0656 1.79% Castro::reset_internal_energy(MultiFab) 63 0.04769 0.05027 0.052 1.42% Castro::reset_internal_energy(Fab) 1008 0.04738 0.04997 0.0517 1.41% FabArray::ParallelCopy_nowait() 41 0.0274 0.04518 0.05142 1.40% Castro::do_old_sources() 10 0.0325 0.04559 0.04929 1.34% StateDataPhysBCFunct::() 41 0.03594 0.04179 0.04646 1.27% StateData::FillBoundary(geom) 41 0.03585 0.04166 0.0463 1.26% Castro::normalize_species() 62 0.0405 0.04217 0.04274 1.16% Castro::construct_new_source() 50 0.02506 0.02978 0.03106 0.85% Castro::post_init() 1 0.028 0.02829 0.02855 0.78% Gravity::interpolate_monopole_grav() 21 0.02666 0.02755 0.02797 0.76% Amr::writePlotFile() 2 0.0267 0.02699 0.02723 0.74% Castro::construct_new_gravity_source() 10 0.02024 0.02316 0.02416 0.66% VisMF::Write(FabArray) 2 0.01289 0.01351 0.01645 0.45% Castro::post_timestep() 10 0.01519 0.01592 0.01639 0.45% Castro::apply_source_to_state() 20 0.008572 0.0145 0.01637 0.45% MultiFab::Saxpy() 20 0.008536 0.01445 0.01632 0.44% Castro::check_for_nan() 20 0.009512 0.01165 0.01358 0.37% MultiFab::contains_nan() 20 0.009493 0.01162 0.01355 0.37% FabArray::setDomainBndry() 41 0.004967 0.01044 0.01249 0.34% Castro::Castro() 1 0.01052 0.01119 0.01199 0.33% Castro::construct_old_source() 50 0.004987 0.01023 0.01175 0.32% Castro::construct_old_gravity_source() 10 0.004953 0.01015 0.01166 0.32% Castro::enforce_min_density() 62 0.00599 0.006958 0.008081 0.22% Castro::initMFs() 1 0.006715 0.007258 0.008072 0.22% Castro::computeNewDt() 9 0.007008 0.007012 0.007016 0.19% AmrLevel::AmrLevel(dm) 1 0.005657 0.005977 0.006444 0.18% StateData::define() 4 0.005642 0.005964 0.006435 0.18% Castro::swap_state_time_levels() 10 0.003305 0.004398 0.005271 0.14% Castro::buildMetrics() 1 0.00168 0.001809 0.001988 0.05% Castro::post_regrid() 1 0.001521 0.001645 0.001835 0.05% Castro::finalize_do_advance() 10 0.0006645 0.001474 0.001754 0.05% Amr::InitAmr() 1 0.0002643 0.0002956 0.0004073 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.195e-05 0.0001323 0.0001729 0.00% DistributionMapping::LeastUsedCPUs() 1 7.449e-06 0.0001272 0.0001665 0.00% Castro::enforce_consistent_e() 1 7.551e-05 8.807e-05 0.0001182 0.00% FabArrayBase::getCPC() 41 7.39e-05 8.501e-05 0.0001083 0.00% Castro::finalize_advance() 10 5.394e-05 6.467e-05 7.187e-05 0.00% Amr::writeSmallPlotFile() 1 3.185e-05 6.033e-05 6.76e-05 0.00% Castro::enforce_speed_limit() 62 2.425e-05 3.181e-05 5.173e-05 0.00% FabArrayBase::CPC::define() 2 2.176e-05 2.63e-05 3.421e-05 0.00% Gravity::swapTimeLevels() 10 5.704e-06 1.17e-05 1.488e-05 0.00% Castro::create_source_corrector() 10 5.509e-06 1.068e-05 1.458e-05 0.00% Gravity::set_mass_offset() 10 6.515e-06 8.891e-06 1.042e-05 0.00% Castro::FluxRegCrseInit 10 6.108e-06 8.692e-06 1.034e-05 0.00% Amr::initSubcycle() 1 8.139e-06 8.858e-06 9.816e-06 0.00% Castro::retry_advance_ctu() 10 4.379e-06 6.367e-06 8.074e-06 0.00% Castro::FluxRegFineAdd() 10 2.116e-06 2.42e-06 3.228e-06 0.00% DistributionMapping::Distribute() 1 9.35e-07 1.032e-06 1.102e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-6-g103db6ebe2b5) finalized