MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-8-g3f715d29c94b) initialized Starting run at 05:40:01 UTC on 2022-08-09. Successfully read inputs file ... Castro git describe: 22.08-6-g2aa2c77ae AMReX git describe: 22.08-8-g3f715d29c Microphysics git describe: 22.08-1-gffefdd62 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015995832 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.362348026 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.342676425 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342030272 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342126158 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.354891207 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.367779307 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.330893326 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.329939505 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.330613479 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.388212014 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.011953261 seconds Ending run at 05:40:04 UTC on 2022-08-09. Run time = 3.707047284 Run time without initialization = 3.511705237 Average number of zones advanced per microsecond: 0.746 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.704 ... 3.706 ... 3.707 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2160 2.4099 2.5276 68.18% Gravity::make_radial_gravity() 21 0.346 0.3594 0.3828 10.33% Castro::do_advance_ctu() 10 0.05461 0.1767 0.3723 10.04% Castro::initData() 1 0.03917 0.08151 0.1266 3.42% FabArray::ParallelCopy_finish() 41 0.04863 0.06418 0.1198 3.23% Castro::estTimeStep() 21 0.0292 0.07438 0.1177 3.18% FabArray::setVal() 143 0.05829 0.06844 0.07207 1.94% Castro::reset_internal_energy(Fab) 1008 0.04824 0.05041 0.0532 1.44% FabArray::ParallelCopy_nowait() 41 0.02917 0.04362 0.04859 1.31% StateData::FillBoundary(geom) 41 0.03965 0.0423 0.04731 1.28% Castro::normalize_species() 62 0.04096 0.04167 0.04314 1.16% FillPatchIterator::Initialize 41 0.02543 0.03595 0.04002 1.08% Gravity::interpolate_monopole_grav() 21 0.02702 0.02794 0.02882 0.78% Castro::construct_new_gravity_source() 10 0.02036 0.02356 0.02522 0.68% Castro::expand_state() 10 0.01028 0.0188 0.0225 0.61% Castro::computeTemp() 63 0.01783 0.01926 0.02092 0.56% Castro::initialize_do_advance() 10 0.01044 0.01773 0.01999 0.54% VisMF::Write(FabArray) 2 0.01358 0.01443 0.01721 0.46% MultiFab::Saxpy() 20 0.009093 0.01404 0.01589 0.43% Amr::writePlotFile() 2 0.01096 0.01383 0.01498 0.40% Gravity::get_new_grav_vector() 11 0.007715 0.01144 0.01292 0.35% MultiFab::contains_nan() 20 0.009884 0.01144 0.01262 0.34% FabArray::setDomainBndry() 41 0.005165 0.009984 0.0119 0.32% Castro::construct_old_gravity_source() 10 0.005606 0.01016 0.01174 0.32% Gravity::get_old_grav_vector() 10 0.006015 0.009499 0.01151 0.31% Castro::initMFs() 1 0.00666 0.007869 0.01104 0.30% Castro::initialize_advance() 10 0.003261 0.009019 0.01009 0.27% StateData::define() 4 0.0056 0.006548 0.008251 0.22% main() 1 0.004395 0.006625 0.007637 0.21% Castro::enforce_min_density() 62 0.006117 0.006771 0.007284 0.20% Castro::construct_new_source() 50 0.004945 0.006509 0.007087 0.19% Castro::swap_state_time_levels() 10 0.003344 0.004439 0.004698 0.13% Amr::coarseTimeStep() 10 0.0008845 0.001661 0.00308 0.08% Castro::buildMetrics() 1 0.001579 0.001841 0.002363 0.06% Castro::finalize_do_advance() 10 0.0006493 0.001543 0.001909 0.05% Amr::InitAmr() 1 0.0002682 0.0003562 0.0005065 0.01% Amr::timeStep() 10 0.0001815 0.0002418 0.000478 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002906 0.0003169 0.0003347 0.01% DistributionMapping::LeastUsedCPUs() 1 7.828e-06 0.0001832 0.0002856 0.01% Castro::clean_state() 62 0.0001522 0.0001769 0.0002173 0.01% StateDataPhysBCFunct::() 41 0.0001146 0.0001265 0.0001431 0.00% Castro::enforce_consistent_e() 1 7.571e-05 8.677e-05 0.0001001 0.00% FabArray::ParallelCopy() 41 8.167e-05 8.855e-05 0.0001001 0.00% Castro::do_old_sources() 10 4.333e-05 7.549e-05 9.856e-05 0.00% Castro::do_new_sources() 10 4.325e-05 7.049e-05 9.027e-05 0.00% Castro::construct_old_source() 50 4.658e-05 7.362e-05 8.88e-05 0.00% Amr::FinalizeInit() 1 3.564e-06 1.562e-05 8.299e-05 0.00% Castro::advance() 10 3.765e-05 5.213e-05 7.514e-05 0.00% Castro::Castro() 1 5.12e-05 5.821e-05 7.43e-05 0.00% FillPatchSingleLevel 41 6.161e-05 6.933e-05 7.317e-05 0.00% FabArrayBase::getCPC() 41 5.624e-05 6.223e-05 7.217e-05 0.00% Castro::construct_old_gravity() 10 3.904e-05 5.403e-05 7.133e-05 0.00% Amr::writeSmallPlotFile() 1 2.502e-05 5.761e-05 7.093e-05 0.00% Castro::subcycle_advance_ctu() 10 4.071e-05 5.06e-05 6.495e-05 0.00% Castro::finalize_advance() 10 4.997e-05 5.286e-05 5.923e-05 0.00% Castro::apply_source_to_state() 20 3.976e-05 5.062e-05 5.766e-05 0.00% Castro::construct_new_gravity() 10 4.172e-05 4.801e-05 5.333e-05 0.00% Amr::defBaseLevel() 1 3.622e-05 3.944e-05 4.541e-05 0.00% Castro::enforce_speed_limit() 62 2.241e-05 2.812e-05 3.115e-05 0.00% FabArrayBase::CPC::define() 2 2.173e-05 2.616e-05 2.977e-05 0.00% Castro::check_for_nan() 20 2.105e-05 2.341e-05 2.483e-05 0.00% Castro::post_timestep() 10 1.397e-05 1.748e-05 2.327e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.758e-06 1.325e-05 1.91e-05 0.00% Gravity::swapTimeLevels() 10 6.307e-06 1.18e-05 1.526e-05 0.00% Amr::initSubcycle() 1 8.327e-06 1.095e-05 1.43e-05 0.00% Castro::create_source_corrector() 10 8.39e-06 1.069e-05 1.247e-05 0.00% Gravity::set_mass_offset() 10 7.021e-06 9.01e-06 1.153e-05 0.00% Castro::computeNewDt() 9 8.133e-06 1.018e-05 1.136e-05 0.00% Castro::FluxRegCrseInit 10 6.632e-06 8.753e-06 1.074e-05 0.00% Amr::init() 1 1.731e-06 2.972e-06 9.748e-06 0.00% Castro::computeInitialDt() 2 3.237e-06 4.35e-06 9.304e-06 0.00% Castro::post_regrid() 1 1.923e-06 5.601e-06 8.213e-06 0.00% Castro::retry_advance_ctu() 10 4.703e-06 5.962e-06 7.777e-06 0.00% Amr::InitializeInit() 1 2.186e-06 5.445e-06 7.631e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.67e-06 4.44e-06 5.76e-06 0.00% Castro::post_init() 1 2.605e-06 3.447e-06 4.303e-06 0.00% Castro::FluxRegFineAdd() 10 1.745e-06 2.304e-06 3.05e-06 0.00% Amr::initialInit() 1 1.342e-06 1.608e-06 2.257e-06 0.00% DistributionMapping::Distribute() 1 9.67e-07 1.16e-06 1.375e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.704 3.706 3.707 100.00% Amr::coarseTimeStep() 10 3.492 3.492 3.492 94.20% Amr::timeStep() 10 3.481 3.483 3.483 93.96% Castro::advance() 10 3.466 3.467 3.467 93.52% Castro::subcycle_advance_ctu() 10 3.393 3.396 3.407 91.90% Castro::do_advance_ctu() 10 3.393 3.396 3.407 91.90% Castro::construct_ctu_hydro_source() 10 2.216 2.41 2.528 68.18% Gravity::make_radial_gravity() 21 0.346 0.3594 0.3828 10.33% Castro::construct_old_gravity() 10 0.2078 0.218 0.2365 6.38% Gravity::get_old_grav_vector() 10 0.2068 0.2172 0.236 6.37% Gravity::get_new_grav_vector() 11 0.2279 0.2324 0.2341 6.32% FillPatchIterator::Initialize 41 0.1876 0.1964 0.2198 5.93% Castro::construct_new_gravity() 10 0.2013 0.205 0.2064 5.57% Amr::init() 1 0.1947 0.1948 0.1949 5.26% FillPatchSingleLevel 41 0.1377 0.1505 0.1893 5.11% Castro::initialize_do_advance() 10 0.1673 0.1785 0.1851 4.99% Amr::initialInit() 1 0.1783 0.1786 0.1789 4.83% FabArray::ParallelCopy() 41 0.09629 0.108 0.1492 4.02% Amr::InitializeInit() 1 0.05981 0.1036 0.1482 4.00% Amr::defBaseLevel() 1 0.0598 0.1036 0.1482 4.00% Castro::expand_state() 10 0.123 0.1301 0.1342 3.62% Castro::initData() 1 0.04275 0.08529 0.1301 3.51% Castro::clean_state() 62 0.1133 0.1177 0.1216 3.28% FabArray::ParallelCopy_finish() 41 0.04863 0.06418 0.1198 3.23% Amr::FinalizeInit() 1 0.03057 0.075 0.1186 3.20% Castro::estTimeStep() 21 0.0292 0.07438 0.1177 3.18% Castro::computeInitialDt() 2 0.001613 0.04612 0.08997 2.43% Castro::computeTemp() 63 0.06686 0.06999 0.07361 1.99% Castro::initialize_advance() 10 0.05862 0.0702 0.07348 1.98% FabArray::setVal() 143 0.05829 0.06844 0.07207 1.94% Castro::do_new_sources() 10 0.05467 0.06354 0.06528 1.76% Castro::reset_internal_energy(MultiFab) 63 0.04858 0.05073 0.05353 1.44% Castro::reset_internal_energy(Fab) 1008 0.04824 0.05041 0.0532 1.44% Castro::do_old_sources() 10 0.03565 0.04603 0.05123 1.38% FabArray::ParallelCopy_nowait() 41 0.02926 0.0437 0.04868 1.31% StateDataPhysBCFunct::() 41 0.03977 0.04243 0.04745 1.28% StateData::FillBoundary(geom) 41 0.03965 0.0423 0.04731 1.28% Castro::normalize_species() 62 0.04096 0.04167 0.04314 1.16% Castro::construct_new_source() 50 0.0253 0.03007 0.03231 0.87% Gravity::interpolate_monopole_grav() 21 0.02702 0.02794 0.02882 0.78% Amr::writePlotFile() 2 0.02804 0.02826 0.02856 0.77% Castro::post_init() 1 0.02767 0.02817 0.0285 0.77% Castro::construct_new_gravity_source() 10 0.02036 0.02356 0.02522 0.68% VisMF::Write(FabArray) 2 0.01358 0.01443 0.01721 0.46% Castro::post_timestep() 10 0.01496 0.01577 0.0162 0.44% Castro::apply_source_to_state() 20 0.009141 0.0141 0.01595 0.43% MultiFab::Saxpy() 20 0.009093 0.01404 0.01589 0.43% Castro::Castro() 1 0.01017 0.01151 0.015 0.40% Castro::check_for_nan() 20 0.009906 0.01146 0.01265 0.34% MultiFab::contains_nan() 20 0.009884 0.01144 0.01262 0.34% FabArray::setDomainBndry() 41 0.005165 0.009984 0.0119 0.32% Castro::construct_old_source() 50 0.005654 0.01023 0.01183 0.32% Castro::construct_old_gravity_source() 10 0.005606 0.01016 0.01174 0.32% Castro::initMFs() 1 0.00666 0.007869 0.01104 0.30% AmrLevel::AmrLevel(dm) 1 0.005615 0.006561 0.008271 0.22% StateData::define() 4 0.0056 0.006548 0.008251 0.22% Castro::enforce_min_density() 62 0.006117 0.006771 0.007284 0.20% Castro::computeNewDt() 9 0.00707 0.00708 0.007091 0.19% Castro::swap_state_time_levels() 10 0.003344 0.004439 0.004698 0.13% Castro::buildMetrics() 1 0.001694 0.00199 0.002593 0.07% Castro::post_regrid() 1 0.001517 0.001634 0.00199 0.05% Castro::finalize_do_advance() 10 0.0006493 0.001543 0.001909 0.05% Amr::InitAmr() 1 0.0002791 0.0003672 0.0005203 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.329e-05 0.0001888 0.0002926 0.01% DistributionMapping::LeastUsedCPUs() 1 7.828e-06 0.0001832 0.0002856 0.01% Castro::enforce_consistent_e() 1 7.571e-05 8.677e-05 0.0001001 0.00% FabArrayBase::getCPC() 41 7.961e-05 8.839e-05 9.537e-05 0.00% Castro::finalize_advance() 10 5.852e-05 6.391e-05 7.244e-05 0.00% Amr::writeSmallPlotFile() 1 2.502e-05 5.761e-05 7.093e-05 0.00% Castro::enforce_speed_limit() 62 2.241e-05 2.812e-05 3.115e-05 0.00% FabArrayBase::CPC::define() 2 2.173e-05 2.616e-05 2.977e-05 0.00% Gravity::swapTimeLevels() 10 6.307e-06 1.18e-05 1.526e-05 0.00% Amr::initSubcycle() 1 8.327e-06 1.095e-05 1.43e-05 0.00% Castro::create_source_corrector() 10 8.39e-06 1.069e-05 1.247e-05 0.00% Gravity::set_mass_offset() 10 7.021e-06 9.01e-06 1.153e-05 0.00% Castro::FluxRegCrseInit 10 6.632e-06 8.753e-06 1.074e-05 0.00% Castro::retry_advance_ctu() 10 4.703e-06 5.962e-06 7.777e-06 0.00% Castro::FluxRegFineAdd() 10 1.745e-06 2.304e-06 3.05e-06 0.00% DistributionMapping::Distribute() 1 9.67e-07 1.16e-06 1.375e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-8-g3f715d29c94b) finalized