MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-8-g3f715d29c94b) initialized Starting run at 05:39:06 UTC on 2022-08-10. Successfully read inputs file ... Castro git describe: 22.08-8-g2409a13d7 AMReX git describe: 22.08-8-g3f715d29c Microphysics git describe: 22.08-1-gffefdd62 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.020656586 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.370971706 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.343809932 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342610972 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342152938 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.350541941 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.346738853 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.339158614 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.338826736 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.342316546 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339173169 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.0105772 seconds Ending run at 05:39:10 UTC on 2022-08-10. Run time = 3.693076226 Run time without initialization = 3.474493651 Average number of zones advanced per microsecond: 0.754 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.69 ... 3.693 ... 3.693 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1693 2.4220 2.5137 68.06% Gravity::make_radial_gravity() 21 0.3549 0.3742 0.397 10.75% Castro::do_advance_ctu() 10 0.03562 0.127 0.3822 10.35% FabArray::ParallelCopy_finish() 41 0.04406 0.06705 0.1359 3.68% Castro::initData() 1 0.04245 0.09317 0.1345 3.64% Castro::estTimeStep() 21 0.02633 0.06897 0.1199 3.25% FabArray::setVal() 143 0.052 0.06553 0.06958 1.88% Castro::reset_internal_energy(Fab) 1008 0.04738 0.05067 0.05345 1.45% FabArray::ParallelCopy_nowait() 41 0.02804 0.04472 0.05148 1.39% StateData::FillBoundary(geom) 41 0.0374 0.04295 0.04945 1.34% Castro::normalize_species() 62 0.03992 0.04207 0.04506 1.22% FillPatchIterator::Initialize 41 0.02482 0.03674 0.0428 1.16% Gravity::interpolate_monopole_grav() 21 0.027 0.02787 0.02886 0.78% Castro::construct_new_gravity_source() 10 0.01948 0.02261 0.02344 0.63% Castro::expand_state() 10 0.009815 0.01827 0.02285 0.62% Castro::computeTemp() 63 0.01755 0.01939 0.02143 0.58% Castro::initialize_do_advance() 10 0.0104 0.0178 0.02076 0.56% VisMF::Write(FabArray) 2 0.01304 0.0143 0.01872 0.51% Amr::writePlotFile() 2 0.01272 0.01531 0.01711 0.46% MultiFab::Saxpy() 20 0.00866 0.01423 0.01627 0.44% Gravity::get_new_grav_vector() 11 0.007558 0.01145 0.01336 0.36% FabArray::setDomainBndry() 41 0.004824 0.01042 0.0124 0.34% MultiFab::contains_nan() 20 0.01001 0.01134 0.01223 0.33% Castro::construct_old_gravity_source() 10 0.004941 0.01008 0.01199 0.32% Gravity::get_old_grav_vector() 10 0.005476 0.009279 0.0111 0.30% Castro::initialize_advance() 10 0.003254 0.008817 0.01037 0.28% Castro::initMFs() 1 0.006761 0.007872 0.01005 0.27% StateData::define() 4 0.005696 0.006526 0.008254 0.22% Castro::enforce_min_density() 62 0.005945 0.006775 0.007245 0.20% Castro::construct_new_source() 50 0.004884 0.006509 0.007021 0.19% main() 1 0.004229 0.006355 0.00702 0.19% Castro::swap_state_time_levels() 10 0.003301 0.004888 0.006748 0.18% Amr::coarseTimeStep() 10 0.000888 0.001489 0.002922 0.08% Castro::buildMetrics() 1 0.001599 0.001855 0.00236 0.06% Castro::finalize_do_advance() 10 0.0006461 0.001389 0.001591 0.04% Amr::InitAmr() 1 0.0002616 0.0003776 0.0006648 0.02% DistributionMapping::LeastUsedCPUs() 1 7.938e-06 0.0003544 0.0004909 0.01% Amr::timeStep() 10 0.0001734 0.0002317 0.0004632 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002912 0.0003155 0.0003368 0.01% Castro::clean_state() 62 0.0001433 0.0001608 0.0001876 0.01% Castro::enforce_consistent_e() 1 8.74e-05 0.0001026 0.0001426 0.00% StateDataPhysBCFunct::() 41 8.398e-05 0.0001165 0.0001345 0.00% Castro::Castro() 1 5.617e-05 7.133e-05 0.0001179 0.00% FabArray::ParallelCopy() 41 6.949e-05 8.692e-05 9.683e-05 0.00% Castro::construct_old_source() 50 3.767e-05 7.51e-05 9.342e-05 0.00% Castro::do_new_sources() 10 4.478e-05 6.929e-05 8.527e-05 0.00% Castro::do_old_sources() 10 3.864e-05 6.701e-05 8.467e-05 0.00% FillPatchSingleLevel 41 6.267e-05 7.239e-05 8.092e-05 0.00% Amr::writeSmallPlotFile() 1 2.667e-05 5.344e-05 7.537e-05 0.00% Amr::FinalizeInit() 1 3.77e-06 1.356e-05 7.146e-05 0.00% Castro::construct_old_gravity() 10 2.895e-05 5.126e-05 6.727e-05 0.00% FabArrayBase::getCPC() 41 4.493e-05 5.425e-05 6.495e-05 0.00% Castro::apply_source_to_state() 20 3.522e-05 5.011e-05 6.2e-05 0.00% Castro::subcycle_advance_ctu() 10 3.414e-05 4.965e-05 6.071e-05 0.00% Amr::defBaseLevel() 1 3.435e-05 4.054e-05 5.663e-05 0.00% Castro::finalize_advance() 10 4.617e-05 5.124e-05 5.625e-05 0.00% Castro::construct_new_gravity() 10 3.494e-05 4.527e-05 5.314e-05 0.00% Castro::advance() 10 3.457e-05 4.379e-05 5.227e-05 0.00% FabArrayBase::CPC::define() 2 2.198e-05 2.875e-05 3.719e-05 0.00% Castro::enforce_speed_limit() 62 1.988e-05 2.758e-05 3.321e-05 0.00% Castro::check_for_nan() 20 2.009e-05 2.321e-05 2.55e-05 0.00% Amr::initSubcycle() 1 8.521e-06 1.211e-05 2.28e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.804e-06 1.191e-05 1.922e-05 0.00% Gravity::swapTimeLevels() 10 5.843e-06 1.333e-05 1.909e-05 0.00% Castro::post_timestep() 10 1.289e-05 1.46e-05 1.667e-05 0.00% Castro::create_source_corrector() 10 6.121e-06 1.044e-05 1.419e-05 0.00% Castro::computeNewDt() 9 8.088e-06 1.01e-05 1.213e-05 0.00% Gravity::set_mass_offset() 10 5.975e-06 8.843e-06 1.157e-05 0.00% Castro::FluxRegCrseInit 10 5.542e-06 7.91e-06 1.022e-05 0.00% Amr::InitializeInit() 1 2.305e-06 5.128e-06 9.657e-06 0.00% Castro::post_init() 1 2.699e-06 4.704e-06 9.491e-06 0.00% Castro::retry_advance_ctu() 10 3.421e-06 6.101e-06 7.46e-06 0.00% Castro::post_regrid() 1 1.927e-06 3.712e-06 6.748e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.625e-06 4.439e-06 5.665e-06 0.00% Castro::computeInitialDt() 2 3.71e-06 4.521e-06 5.069e-06 0.00% Amr::init() 1 1.749e-06 2.177e-06 3.211e-06 0.00% Castro::FluxRegFineAdd() 10 1.929e-06 2.232e-06 2.878e-06 0.00% Amr::initialInit() 1 1.426e-06 1.606e-06 1.988e-06 0.00% DistributionMapping::Distribute() 1 9.57e-07 1.18e-06 1.443e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.69 3.693 3.693 100.00% Amr::coarseTimeStep() 10 3.457 3.457 3.457 93.61% Amr::timeStep() 10 3.446 3.447 3.448 93.36% Castro::advance() 10 3.43 3.431 3.431 92.91% Castro::subcycle_advance_ctu() 10 3.356 3.363 3.377 91.45% Castro::do_advance_ctu() 10 3.356 3.363 3.377 91.45% Castro::construct_ctu_hydro_source() 10 2.169 2.422 2.514 68.06% Gravity::make_radial_gravity() 21 0.3549 0.3742 0.397 10.75% Gravity::get_new_grav_vector() 11 0.2404 0.2425 0.2441 6.61% Castro::construct_old_gravity() 10 0.2079 0.2239 0.2408 6.52% Gravity::get_old_grav_vector() 10 0.2071 0.2232 0.2403 6.51% FillPatchIterator::Initialize 41 0.1905 0.2022 0.2324 6.29% Amr::init() 1 0.2177 0.218 0.2182 5.91% Castro::construct_new_gravity() 10 0.2019 0.2039 0.2052 5.56% FillPatchSingleLevel 41 0.1384 0.1551 0.2028 5.49% Amr::initialInit() 1 0.1969 0.1991 0.2002 5.42% Castro::initialize_do_advance() 10 0.1757 0.1835 0.1918 5.19% FabArray::ParallelCopy() 41 0.09571 0.1119 0.1641 4.44% Amr::InitializeInit() 1 0.063 0.1161 0.1569 4.25% Amr::defBaseLevel() 1 0.06299 0.1161 0.1569 4.25% Castro::expand_state() 10 0.1283 0.1346 0.1427 3.86% Castro::initData() 1 0.0466 0.09753 0.1386 3.75% FabArray::ParallelCopy_finish() 41 0.04406 0.06705 0.1359 3.68% Amr::FinalizeInit() 1 0.04235 0.08295 0.1339 3.63% Castro::clean_state() 62 0.1114 0.1183 0.126 3.41% Castro::estTimeStep() 21 0.02633 0.06897 0.1199 3.25% Castro::computeInitialDt() 2 0.002118 0.0428 0.0956 2.59% Castro::computeTemp() 63 0.06522 0.07037 0.07521 2.04% Castro::initialize_advance() 10 0.05266 0.06813 0.07494 2.03% FabArray::setVal() 143 0.052 0.06553 0.06958 1.88% Castro::do_new_sources() 10 0.0533 0.06277 0.06463 1.75% Castro::reset_internal_energy(MultiFab) 63 0.04767 0.05098 0.05378 1.46% Castro::reset_internal_energy(Fab) 1008 0.04738 0.05067 0.05345 1.45% FabArray::ParallelCopy_nowait() 41 0.02812 0.04481 0.05156 1.40% Castro::do_old_sources() 10 0.03276 0.04529 0.04969 1.35% StateDataPhysBCFunct::() 41 0.0375 0.04307 0.04957 1.34% StateData::FillBoundary(geom) 41 0.0374 0.04295 0.04945 1.34% Castro::normalize_species() 62 0.03992 0.04207 0.04506 1.22% Castro::post_init() 1 0.03791 0.03942 0.04001 1.08% Amr::writePlotFile() 2 0.02839 0.0296 0.03144 0.85% Castro::construct_new_source() 50 0.02436 0.02912 0.03038 0.82% Gravity::interpolate_monopole_grav() 21 0.027 0.02787 0.02886 0.78% Castro::construct_new_gravity_source() 10 0.01948 0.02261 0.02344 0.63% VisMF::Write(FabArray) 2 0.01304 0.0143 0.01872 0.51% Castro::post_timestep() 10 0.01521 0.01588 0.01635 0.44% Castro::apply_source_to_state() 20 0.008695 0.01428 0.01633 0.44% MultiFab::Saxpy() 20 0.00866 0.01423 0.01627 0.44% Castro::Castro() 1 0.01039 0.01166 0.01428 0.39% FabArray::setDomainBndry() 41 0.004824 0.01042 0.0124 0.34% Castro::check_for_nan() 20 0.01003 0.01136 0.01225 0.33% MultiFab::contains_nan() 20 0.01001 0.01134 0.01223 0.33% Castro::construct_old_source() 50 0.004979 0.01015 0.01207 0.33% Castro::construct_old_gravity_source() 10 0.004941 0.01008 0.01199 0.32% Castro::initMFs() 1 0.006761 0.007872 0.01005 0.27% AmrLevel::AmrLevel(dm) 1 0.005706 0.006538 0.008273 0.22% StateData::define() 4 0.005696 0.006526 0.008254 0.22% Castro::enforce_min_density() 62 0.005945 0.006775 0.007245 0.20% Castro::computeNewDt() 9 0.007097 0.007139 0.007157 0.19% Castro::swap_state_time_levels() 10 0.003301 0.004888 0.006748 0.18% Castro::post_regrid() 1 0.001585 0.002024 0.002912 0.08% Castro::buildMetrics() 1 0.001722 0.002006 0.002585 0.07% Castro::finalize_do_advance() 10 0.0006461 0.001389 0.001591 0.04% Amr::InitAmr() 1 0.0002704 0.0003897 0.0006876 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.388e-05 0.00036 0.0004977 0.01% DistributionMapping::LeastUsedCPUs() 1 7.938e-06 0.0003544 0.0004909 0.01% Castro::enforce_consistent_e() 1 8.74e-05 0.0001026 0.0001426 0.00% FabArrayBase::getCPC() 41 7.238e-05 8.3e-05 0.0001021 0.00% Amr::writeSmallPlotFile() 1 2.667e-05 5.344e-05 7.537e-05 0.00% Castro::finalize_advance() 10 5.444e-05 6.138e-05 6.64e-05 0.00% FabArrayBase::CPC::define() 2 2.198e-05 2.875e-05 3.719e-05 0.00% Castro::enforce_speed_limit() 62 1.988e-05 2.758e-05 3.321e-05 0.00% Amr::initSubcycle() 1 8.521e-06 1.211e-05 2.28e-05 0.00% Gravity::swapTimeLevels() 10 5.843e-06 1.333e-05 1.909e-05 0.00% Castro::create_source_corrector() 10 6.121e-06 1.044e-05 1.419e-05 0.00% Gravity::set_mass_offset() 10 5.975e-06 8.843e-06 1.157e-05 0.00% Castro::FluxRegCrseInit 10 5.542e-06 7.91e-06 1.022e-05 0.00% Castro::retry_advance_ctu() 10 3.421e-06 6.101e-06 7.46e-06 0.00% Castro::FluxRegFineAdd() 10 1.929e-06 2.232e-06 2.878e-06 0.00% DistributionMapping::Distribute() 1 9.57e-07 1.18e-06 1.443e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-8-g3f715d29c94b) finalized