MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-10-gd295f2299101) initialized Starting run at 05:39:43 UTC on 2022-08-11. Successfully read inputs file ... Castro git describe: 22.08-8-g2409a13d7 AMReX git describe: 22.08-10-gd295f2299 Microphysics git describe: 22.08-1-gffefdd62 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01597356 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.362415817 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.342889429 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342196843 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342735412 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.354143142 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.361290767 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.341052437 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.34143684 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.341250317 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.340485493 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010465011 seconds Ending run at 05:39:47 UTC on 2022-08-11. Run time = 3.689988649 Run time without initialization = 3.488001835 Average number of zones advanced per microsecond: 0.752 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.688 ... 3.689 ... 3.69 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1582 2.4349 2.5252 68.43% Castro::do_advance_ctu() 10 0.04159 0.132 0.4114 11.15% Gravity::make_radial_gravity() 21 0.3443 0.3566 0.3817 10.34% Castro::initData() 1 0.03906 0.07997 0.1326 3.59% Castro::estTimeStep() 21 0.02819 0.08353 0.1223 3.31% FabArray::ParallelCopy_finish() 41 0.04229 0.06214 0.1186 3.21% FabArray::setVal() 143 0.0626 0.06998 0.07212 1.95% FabArray::ParallelCopy_nowait() 41 0.02824 0.04534 0.05144 1.39% Castro::reset_internal_energy(Fab) 1008 0.04839 0.04993 0.05128 1.39% StateData::FillBoundary(geom) 41 0.03849 0.04269 0.04636 1.26% Castro::normalize_species() 62 0.04087 0.04182 0.04378 1.19% FillPatchIterator::Initialize 41 0.02508 0.03646 0.0407 1.10% Gravity::interpolate_monopole_grav() 21 0.02665 0.02754 0.02791 0.76% Castro::construct_new_gravity_source() 10 0.02033 0.0232 0.02427 0.66% Castro::expand_state() 10 0.00994 0.0188 0.02268 0.61% Castro::computeTemp() 63 0.01795 0.01907 0.01995 0.54% Castro::initialize_do_advance() 10 0.01046 0.01757 0.01968 0.53% MultiFab::Saxpy() 20 0.008631 0.01462 0.01692 0.46% VisMF::Write(FabArray) 2 0.01307 0.01357 0.01615 0.44% Amr::writePlotFile() 2 0.01049 0.01302 0.01379 0.37% Gravity::get_new_grav_vector() 11 0.00751 0.01155 0.01298 0.35% FabArray::setDomainBndry() 41 0.004966 0.01053 0.01257 0.34% MultiFab::contains_nan() 20 0.009593 0.01103 0.01224 0.33% Castro::construct_old_gravity_source() 10 0.004913 0.01019 0.01203 0.33% Gravity::get_old_grav_vector() 10 0.005726 0.009415 0.01097 0.30% Castro::initialize_advance() 10 0.006638 0.01005 0.01081 0.29% Castro::initMFs() 1 0.006799 0.007143 0.00868 0.24% Castro::construct_new_source() 50 0.004901 0.006639 0.007375 0.20% main() 1 0.00445 0.006233 0.00701 0.19% Castro::enforce_min_density() 62 0.00533 0.006208 0.00689 0.19% StateData::define() 4 0.005595 0.005866 0.006431 0.17% Castro::swap_state_time_levels() 10 0.003336 0.004445 0.004756 0.13% Amr::coarseTimeStep() 10 0.0009107 0.00167 0.002935 0.08% Castro::buildMetrics() 1 0.00159 0.001644 0.001851 0.05% Castro::finalize_do_advance() 10 0.0006467 0.001448 0.001687 0.05% Amr::timeStep() 10 0.0001877 0.0002586 0.0005125 0.01% Amr::InitAmr() 1 0.0002423 0.000283 0.0004041 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002998 0.0003081 0.0003164 0.01% Castro::clean_state() 62 0.0001522 0.0001732 0.0002056 0.01% DistributionMapping::LeastUsedCPUs() 1 7.528e-06 0.0001267 0.0001665 0.00% StateDataPhysBCFunct::() 41 9.67e-05 0.0001341 0.000156 0.00% Castro::enforce_consistent_e() 1 7.878e-05 8.828e-05 0.0001113 0.00% FabArray::ParallelCopy() 41 7.984e-05 9.059e-05 0.0001097 0.00% Castro::do_new_sources() 10 5.028e-05 7.496e-05 9.612e-05 0.00% Castro::Castro() 1 5.435e-05 7.096e-05 9.491e-05 0.00% Castro::construct_old_source() 50 3.721e-05 7.778e-05 9.423e-05 0.00% Castro::do_old_sources() 10 4.605e-05 7.363e-05 8.756e-05 0.00% FabArrayBase::getCPC() 41 4.995e-05 6.039e-05 8.173e-05 0.00% FillPatchSingleLevel 41 6.779e-05 7.027e-05 7.625e-05 0.00% Amr::FinalizeInit() 1 4.043e-06 1.296e-05 7.296e-05 0.00% Amr::writeSmallPlotFile() 1 2.468e-05 6.056e-05 6.941e-05 0.00% Castro::subcycle_advance_ctu() 10 3.701e-05 5.555e-05 6.81e-05 0.00% Castro::apply_source_to_state() 20 4.066e-05 5.152e-05 6.467e-05 0.00% Castro::construct_old_gravity() 10 3.858e-05 5.164e-05 6.127e-05 0.00% Castro::finalize_advance() 10 4.917e-05 5.573e-05 6.023e-05 0.00% Castro::construct_new_gravity() 10 3.974e-05 4.726e-05 5.783e-05 0.00% Castro::advance() 10 3.48e-05 4.533e-05 5.345e-05 0.00% Amr::defBaseLevel() 1 3.183e-05 3.897e-05 4.945e-05 0.00% Castro::enforce_speed_limit() 62 2.172e-05 2.796e-05 3.332e-05 0.00% FabArrayBase::CPC::define() 2 2.172e-05 2.561e-05 3.078e-05 0.00% Castro::check_for_nan() 20 2.263e-05 2.46e-05 2.765e-05 0.00% Castro::post_timestep() 10 1.481e-05 1.747e-05 2.339e-05 0.00% Amr::initSubcycle() 1 8.038e-06 9.836e-06 1.783e-05 0.00% Gravity::swapTimeLevels() 10 6.986e-06 1.275e-05 1.71e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.777e-06 1.047e-05 1.492e-05 0.00% Castro::create_source_corrector() 10 6.197e-06 1.066e-05 1.41e-05 0.00% Castro::FluxRegCrseInit 10 5.627e-06 8.478e-06 1.135e-05 0.00% Castro::computeNewDt() 9 7.088e-06 9.39e-06 1.098e-05 0.00% Gravity::set_mass_offset() 10 6.112e-06 9.124e-06 1.06e-05 0.00% Castro::post_init() 1 3.012e-06 4.965e-06 1.031e-05 0.00% Amr::InitializeInit() 1 2.396e-06 6.476e-06 9.255e-06 0.00% Castro::retry_advance_ctu() 10 4.375e-06 6.16e-06 7.57e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.648e-06 4.524e-06 5.355e-06 0.00% Castro::computeInitialDt() 2 3.34e-06 3.979e-06 4.633e-06 0.00% Castro::post_regrid() 1 2.014e-06 2.889e-06 4.094e-06 0.00% Castro::FluxRegFineAdd() 10 1.82e-06 2.518e-06 3.717e-06 0.00% Amr::init() 1 1.41e-06 1.979e-06 2.644e-06 0.00% Amr::initialInit() 1 1.337e-06 1.753e-06 2.171e-06 0.00% DistributionMapping::Distribute() 1 9.71e-07 1.255e-06 1.54e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.687 3.689 3.69 100.00% Amr::coarseTimeStep() 10 3.471 3.471 3.471 94.05% Amr::timeStep() 10 3.46 3.461 3.462 93.81% Castro::advance() 10 3.444 3.445 3.445 93.36% Castro::subcycle_advance_ctu() 10 3.371 3.373 3.379 91.56% Castro::do_advance_ctu() 10 3.371 3.373 3.379 91.56% Castro::construct_ctu_hydro_source() 10 2.158 2.435 2.525 68.43% Gravity::make_radial_gravity() 21 0.3443 0.3566 0.3817 10.34% Gravity::get_new_grav_vector() 11 0.2294 0.2348 0.2369 6.42% Castro::construct_old_gravity() 10 0.2012 0.2118 0.2309 6.26% Gravity::get_old_grav_vector() 10 0.2003 0.211 0.2304 6.24% FillPatchIterator::Initialize 41 0.1896 0.1975 0.2157 5.85% Castro::construct_new_gravity() 10 0.2029 0.208 0.21 5.69% Amr::init() 1 0.2014 0.2015 0.2016 5.46% Castro::initialize_do_advance() 10 0.1672 0.1807 0.1883 5.10% Amr::initialInit() 1 0.1852 0.1855 0.1859 5.04% FillPatchSingleLevel 41 0.1372 0.1505 0.1857 5.03% Amr::InitializeInit() 1 0.05996 0.1014 0.1554 4.21% Amr::defBaseLevel() 1 0.05996 0.1014 0.1554 4.21% FabArray::ParallelCopy() 41 0.09298 0.1077 0.147 3.98% Castro::expand_state() 10 0.1228 0.1325 0.1386 3.76% Castro::initData() 1 0.04308 0.08395 0.1365 3.70% Amr::FinalizeInit() 1 0.0298 0.08409 0.1254 3.40% Castro::estTimeStep() 21 0.02819 0.08353 0.1223 3.31% Castro::clean_state() 62 0.1121 0.1166 0.1191 3.23% FabArray::ParallelCopy_finish() 41 0.04229 0.06214 0.1186 3.21% Castro::computeInitialDt() 2 0.001746 0.05574 0.09721 2.63% Castro::initialize_advance() 10 0.0653 0.07177 0.07376 2.00% FabArray::setVal() 143 0.0626 0.06998 0.07212 1.95% Castro::computeTemp() 63 0.06665 0.06931 0.07153 1.94% Castro::do_new_sources() 10 0.05439 0.06377 0.06577 1.78% Castro::reset_internal_energy(MultiFab) 63 0.0487 0.05023 0.05158 1.40% FabArray::ParallelCopy_nowait() 41 0.02832 0.04542 0.05152 1.40% Castro::reset_internal_energy(Fab) 1008 0.04839 0.04993 0.05128 1.39% Castro::do_old_sources() 10 0.03307 0.04546 0.04918 1.33% StateDataPhysBCFunct::() 41 0.03859 0.04282 0.04649 1.26% StateData::FillBoundary(geom) 41 0.03849 0.04269 0.04636 1.26% Castro::normalize_species() 62 0.04087 0.04182 0.04378 1.19% Castro::construct_new_source() 50 0.02523 0.02984 0.03114 0.84% Castro::post_init() 1 0.02718 0.02767 0.02803 0.76% Gravity::interpolate_monopole_grav() 21 0.02665 0.02754 0.02791 0.76% Amr::writePlotFile() 2 0.02625 0.02659 0.02688 0.73% Castro::construct_new_gravity_source() 10 0.02033 0.0232 0.02427 0.66% Castro::apply_source_to_state() 20 0.008672 0.01467 0.01697 0.46% MultiFab::Saxpy() 20 0.008631 0.01462 0.01692 0.46% Castro::post_timestep() 10 0.01508 0.01578 0.01646 0.45% VisMF::Write(FabArray) 2 0.01307 0.01357 0.01615 0.44% FabArray::setDomainBndry() 41 0.004966 0.01053 0.01257 0.34% Castro::Castro() 1 0.01092 0.0114 0.01232 0.33% Castro::check_for_nan() 20 0.009616 0.01106 0.01227 0.33% MultiFab::contains_nan() 20 0.009593 0.01103 0.01224 0.33% Castro::construct_old_source() 50 0.00495 0.01026 0.01212 0.33% Castro::construct_old_gravity_source() 10 0.004913 0.01019 0.01203 0.33% Castro::initMFs() 1 0.006799 0.007143 0.00868 0.24% Castro::computeNewDt() 9 0.007173 0.007181 0.007188 0.19% Castro::enforce_min_density() 62 0.00533 0.006208 0.00689 0.19% AmrLevel::AmrLevel(dm) 1 0.00561 0.005877 0.00644 0.17% StateData::define() 4 0.005595 0.005866 0.006431 0.17% Castro::swap_state_time_levels() 10 0.003336 0.004445 0.004756 0.13% Castro::buildMetrics() 1 0.001707 0.001771 0.002003 0.05% Castro::post_regrid() 1 0.001536 0.001608 0.001814 0.05% Castro::finalize_do_advance() 10 0.0006467 0.001448 0.001687 0.05% Amr::InitAmr() 1 0.0002508 0.0002929 0.0004121 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.215e-05 0.0001325 0.0001732 0.00% DistributionMapping::LeastUsedCPUs() 1 7.528e-06 0.0001267 0.0001665 0.00% Castro::enforce_consistent_e() 1 7.878e-05 8.828e-05 0.0001113 0.00% FabArrayBase::getCPC() 41 7.705e-05 8.6e-05 0.0001066 0.00% Castro::finalize_advance() 10 5.824e-05 6.673e-05 7.155e-05 0.00% Amr::writeSmallPlotFile() 1 2.468e-05 6.056e-05 6.941e-05 0.00% Castro::enforce_speed_limit() 62 2.172e-05 2.796e-05 3.332e-05 0.00% FabArrayBase::CPC::define() 2 2.172e-05 2.561e-05 3.078e-05 0.00% Amr::initSubcycle() 1 8.038e-06 9.836e-06 1.783e-05 0.00% Gravity::swapTimeLevels() 10 6.986e-06 1.275e-05 1.71e-05 0.00% Castro::create_source_corrector() 10 6.197e-06 1.066e-05 1.41e-05 0.00% Castro::FluxRegCrseInit 10 5.627e-06 8.478e-06 1.135e-05 0.00% Gravity::set_mass_offset() 10 6.112e-06 9.124e-06 1.06e-05 0.00% Castro::retry_advance_ctu() 10 4.375e-06 6.16e-06 7.57e-06 0.00% Castro::FluxRegFineAdd() 10 1.82e-06 2.518e-06 3.717e-06 0.00% DistributionMapping::Distribute() 1 9.71e-07 1.255e-06 1.54e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-10-gd295f2299101) finalized