MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-11-g659351846da6) initialized Starting run at 05:39:04 UTC on 2022-08-12. Successfully read inputs file ... Castro git describe: 22.08-8-g2409a13d7 AMReX git describe: 22.08-11-g659351846 Microphysics git describe: 22.08-2-gd7421d4a reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.017376359 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.347187112 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.344111822 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.343255343 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.34430983 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.346223602 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.351777909 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.340045708 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339748385 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.339222518 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339863912 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010320316 seconds Ending run at 05:39:08 UTC on 2022-08-12. Run time = 3.642800725 Run time without initialization = 3.453891739 Average number of zones advanced per microsecond: 0.759 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.64 ... 3.642 ... 3.643 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0770 2.4082 2.5248 69.31% Castro::do_advance_ctu() 10 0.02765 0.1449 0.4792 13.15% Gravity::make_radial_gravity() 21 0.3384 0.35 0.3756 10.31% Castro::initData() 1 0.03921 0.07858 0.1196 3.28% FabArray::ParallelCopy_finish() 41 0.04307 0.06202 0.1143 3.14% Castro::estTimeStep() 21 0.02086 0.06634 0.1014 2.78% FabArray::setVal() 143 0.06331 0.06824 0.07017 1.93% Castro::reset_internal_energy(Fab) 1008 0.04596 0.04967 0.0514 1.41% FabArray::ParallelCopy_nowait() 41 0.02857 0.04428 0.04963 1.36% StateData::FillBoundary(geom) 41 0.035 0.04174 0.04543 1.25% Castro::normalize_species() 62 0.03818 0.04088 0.04226 1.16% FillPatchIterator::Initialize 41 0.02426 0.03599 0.04032 1.11% Gravity::interpolate_monopole_grav() 21 0.02516 0.02713 0.02795 0.77% Castro::construct_new_gravity_source() 10 0.01975 0.02189 0.02271 0.62% Castro::expand_state() 10 0.009899 0.01824 0.02195 0.60% Castro::initialize_do_advance() 10 0.009998 0.01687 0.02008 0.55% Castro::computeTemp() 63 0.01724 0.01896 0.01979 0.54% VisMF::Write(FabArray) 2 0.01275 0.01389 0.01736 0.48% MultiFab::Saxpy() 20 0.009665 0.01419 0.01599 0.44% Amr::writePlotFile() 2 0.01054 0.01415 0.01524 0.42% Gravity::get_new_grav_vector() 11 0.007449 0.01109 0.01256 0.34% FabArray::setDomainBndry() 41 0.004917 0.01013 0.01228 0.34% Castro::construct_old_gravity_source() 10 0.005107 0.009792 0.01159 0.32% Castro::initialize_advance() 10 0.01073 0.01103 0.01147 0.31% MultiFab::contains_nan() 20 0.009526 0.01082 0.0114 0.31% Gravity::get_old_grav_vector() 10 0.005242 0.009131 0.01074 0.29% Castro::initMFs() 1 0.006792 0.007263 0.008276 0.23% main() 1 0.004458 0.006463 0.007107 0.20% Castro::construct_new_source() 50 0.004813 0.006392 0.007 0.19% StateData::define() 4 0.005697 0.005994 0.006474 0.18% Castro::enforce_min_density() 62 0.005191 0.005981 0.006468 0.18% Castro::swap_state_time_levels() 10 0.003348 0.004497 0.004986 0.14% Amr::coarseTimeStep() 10 0.0008576 0.001965 0.003844 0.11% Castro::buildMetrics() 1 0.001579 0.001689 0.001849 0.05% Castro::finalize_do_advance() 10 0.0007686 0.001336 0.001673 0.05% Amr::timeStep() 10 0.0001702 0.0002301 0.0004787 0.01% Amr::InitAmr() 1 0.0002504 0.0002812 0.0003898 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002752 0.0003107 0.0003551 0.01% Castro::clean_state() 62 0.0001117 0.0001523 0.0002129 0.01% DistributionMapping::LeastUsedCPUs() 1 7.74e-06 0.0001218 0.000153 0.00% StateDataPhysBCFunct::() 41 8.182e-05 0.0001216 0.000144 0.00% Castro::enforce_consistent_e() 1 7.828e-05 8.558e-05 0.0001062 0.00% FabArray::ParallelCopy() 41 7.245e-05 8.431e-05 9.288e-05 0.00% Castro::construct_old_source() 50 2.907e-05 7.046e-05 8.944e-05 0.00% Castro::do_old_sources() 10 3.531e-05 6.771e-05 8.897e-05 0.00% Castro::do_new_sources() 10 4.114e-05 6.768e-05 8.516e-05 0.00% Castro::Castro() 1 6.089e-05 6.907e-05 8.436e-05 0.00% Amr::FinalizeInit() 1 3.735e-06 1.436e-05 7.913e-05 0.00% FillPatchSingleLevel 41 5.328e-05 6.596e-05 7.724e-05 0.00% Castro::construct_old_gravity() 10 3.279e-05 5.216e-05 7.289e-05 0.00% Castro::subcycle_advance_ctu() 10 2.825e-05 5.538e-05 7.107e-05 0.00% Amr::defBaseLevel() 1 3.769e-05 5.689e-05 7.094e-05 0.00% Amr::writeSmallPlotFile() 1 2.457e-05 5.248e-05 6.717e-05 0.00% Castro::construct_new_gravity() 10 3.545e-05 4.852e-05 6.072e-05 0.00% Castro::finalize_advance() 10 4.672e-05 5.304e-05 5.793e-05 0.00% FabArrayBase::getCPC() 41 4.545e-05 5.185e-05 5.786e-05 0.00% Castro::apply_source_to_state() 20 2.744e-05 4.683e-05 5.784e-05 0.00% Castro::advance() 10 3.075e-05 4.228e-05 5.47e-05 0.00% Castro::check_for_nan() 20 1.956e-05 2.483e-05 3.933e-05 0.00% Castro::enforce_speed_limit() 62 2.014e-05 2.716e-05 3.185e-05 0.00% Castro::post_timestep() 10 1.309e-05 1.963e-05 2.84e-05 0.00% FabArrayBase::CPC::define() 2 2.335e-05 2.46e-05 2.764e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.624e-06 1.194e-05 1.79e-05 0.00% Gravity::swapTimeLevels() 10 6.558e-06 1.195e-05 1.519e-05 0.00% Castro::post_init() 1 2.892e-06 5.461e-06 1.269e-05 0.00% Castro::computeNewDt() 9 6.685e-06 9.243e-06 1.223e-05 0.00% Castro::create_source_corrector() 10 6.165e-06 9.998e-06 1.162e-05 0.00% Castro::FluxRegCrseInit 10 5.548e-06 8.666e-06 1.119e-05 0.00% Gravity::set_mass_offset() 10 5.526e-06 8.992e-06 1.078e-05 0.00% Amr::initSubcycle() 1 7.968e-06 8.723e-06 9.242e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.723e-06 5.216e-06 8.249e-06 0.00% Castro::retry_advance_ctu() 10 4.207e-06 6.141e-06 7.179e-06 0.00% Amr::InitializeInit() 1 1.97e-06 2.821e-06 6.725e-06 0.00% Castro::computeInitialDt() 2 3.739e-06 4.372e-06 4.925e-06 0.00% Castro::post_regrid() 1 1.999e-06 2.644e-06 4.067e-06 0.00% Amr::init() 1 2.051e-06 2.396e-06 2.951e-06 0.00% Castro::FluxRegFineAdd() 10 1.94e-06 2.426e-06 2.944e-06 0.00% Amr::initialInit() 1 1.343e-06 1.719e-06 2.763e-06 0.00% DistributionMapping::Distribute() 1 9.22e-07 1.084e-06 1.229e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.64 3.642 3.643 100.00% Amr::coarseTimeStep() 10 3.437 3.437 3.437 94.34% Amr::timeStep() 10 3.424 3.426 3.427 94.09% Castro::advance() 10 3.41 3.411 3.411 93.63% Castro::subcycle_advance_ctu() 10 3.337 3.338 3.339 91.67% Castro::do_advance_ctu() 10 3.337 3.338 3.339 91.66% Castro::construct_ctu_hydro_source() 10 2.077 2.408 2.525 69.31% Gravity::make_radial_gravity() 21 0.3384 0.35 0.3756 10.31% Gravity::get_new_grav_vector() 11 0.2255 0.2287 0.2304 6.32% Castro::construct_old_gravity() 10 0.1992 0.2096 0.2288 6.28% Gravity::get_old_grav_vector() 10 0.1982 0.2088 0.2282 6.26% FillPatchIterator::Initialize 41 0.1858 0.1945 0.2075 5.70% Castro::construct_new_gravity() 10 0.2007 0.2032 0.2047 5.62% Amr::init() 1 0.1884 0.1885 0.1885 5.17% Castro::initialize_do_advance() 10 0.1592 0.1768 0.1854 5.09% FillPatchSingleLevel 41 0.1343 0.1484 0.1781 4.89% Amr::initialInit() 1 0.1707 0.1708 0.1709 4.69% FabArray::ParallelCopy() 41 0.09213 0.1065 0.143 3.93% Amr::InitializeInit() 1 0.06134 0.09992 0.1422 3.90% Amr::defBaseLevel() 1 0.06134 0.09992 0.1422 3.90% Castro::expand_state() 10 0.1225 0.1303 0.136 3.73% Castro::initData() 1 0.04263 0.08248 0.1234 3.39% Castro::clean_state() 62 0.1064 0.1151 0.1183 3.25% FabArray::ParallelCopy_finish() 41 0.04307 0.06202 0.1143 3.14% Amr::FinalizeInit() 1 0.02847 0.07089 0.1095 3.00% Castro::estTimeStep() 21 0.02086 0.06634 0.1014 2.78% Castro::computeInitialDt() 2 0.001981 0.04426 0.08283 2.27% Castro::initialize_advance() 10 0.07084 0.07284 0.07382 2.03% Castro::computeTemp() 63 0.06348 0.06894 0.07106 1.95% FabArray::setVal() 143 0.06331 0.06824 0.07017 1.93% Castro::do_new_sources() 10 0.05286 0.0609 0.06376 1.75% Castro::reset_internal_energy(MultiFab) 63 0.04624 0.04998 0.05175 1.42% Castro::reset_internal_energy(Fab) 1008 0.04596 0.04967 0.0514 1.41% FabArray::ParallelCopy_nowait() 41 0.02864 0.04435 0.04971 1.36% Castro::do_old_sources() 10 0.03309 0.04416 0.04797 1.32% StateDataPhysBCFunct::() 41 0.03508 0.04186 0.04558 1.25% StateData::FillBoundary(geom) 41 0.035 0.04174 0.04543 1.25% Castro::normalize_species() 62 0.03818 0.04088 0.04226 1.16% Castro::construct_new_source() 50 0.02456 0.02828 0.02964 0.81% Amr::writePlotFile() 2 0.0279 0.02804 0.02817 0.77% Gravity::interpolate_monopole_grav() 21 0.02516 0.02713 0.02795 0.77% Castro::post_init() 1 0.02608 0.02621 0.02634 0.72% Castro::construct_new_gravity_source() 10 0.01975 0.02189 0.02271 0.62% VisMF::Write(FabArray) 2 0.01275 0.01389 0.01736 0.48% Castro::post_timestep() 10 0.01429 0.01556 0.01614 0.44% Castro::apply_source_to_state() 20 0.009692 0.01424 0.01605 0.44% MultiFab::Saxpy() 20 0.009665 0.01419 0.01599 0.44% FabArray::setDomainBndry() 41 0.004917 0.01013 0.01228 0.34% Castro::Castro() 1 0.01073 0.01125 0.01217 0.33% Castro::construct_old_source() 50 0.005136 0.009863 0.01167 0.32% Castro::construct_old_gravity_source() 10 0.005107 0.009792 0.01159 0.32% Castro::check_for_nan() 20 0.009547 0.01084 0.01143 0.31% MultiFab::contains_nan() 20 0.009526 0.01082 0.0114 0.31% Castro::initMFs() 1 0.006792 0.007263 0.008276 0.23% Castro::computeNewDt() 9 0.007023 0.00704 0.007049 0.19% AmrLevel::AmrLevel(dm) 1 0.005711 0.006006 0.006492 0.18% StateData::define() 4 0.005697 0.005994 0.006474 0.18% Castro::enforce_min_density() 62 0.005191 0.005981 0.006468 0.18% Castro::swap_state_time_levels() 10 0.003348 0.004497 0.004986 0.14% Castro::buildMetrics() 1 0.001693 0.001816 0.002002 0.05% Castro::finalize_do_advance() 10 0.0007686 0.001336 0.001673 0.05% Castro::post_regrid() 1 0.00151 0.001566 0.001661 0.05% Amr::InitAmr() 1 0.0002593 0.00029 0.0003979 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.26e-05 0.0001281 0.00016 0.00% DistributionMapping::LeastUsedCPUs() 1 7.74e-06 0.0001218 0.000153 0.00% Castro::enforce_consistent_e() 1 7.828e-05 8.558e-05 0.0001062 0.00% FabArrayBase::getCPC() 41 6.979e-05 7.645e-05 8.367e-05 0.00% Castro::finalize_advance() 10 5.449e-05 6.413e-05 7.097e-05 0.00% Amr::writeSmallPlotFile() 1 2.457e-05 5.248e-05 6.717e-05 0.00% Castro::enforce_speed_limit() 62 2.014e-05 2.716e-05 3.185e-05 0.00% FabArrayBase::CPC::define() 2 2.335e-05 2.46e-05 2.764e-05 0.00% Gravity::swapTimeLevels() 10 6.558e-06 1.195e-05 1.519e-05 0.00% Castro::create_source_corrector() 10 6.165e-06 9.998e-06 1.162e-05 0.00% Castro::FluxRegCrseInit 10 5.548e-06 8.666e-06 1.119e-05 0.00% Gravity::set_mass_offset() 10 5.526e-06 8.992e-06 1.078e-05 0.00% Amr::initSubcycle() 1 7.968e-06 8.723e-06 9.242e-06 0.00% Castro::retry_advance_ctu() 10 4.207e-06 6.141e-06 7.179e-06 0.00% Castro::FluxRegFineAdd() 10 1.94e-06 2.426e-06 2.944e-06 0.00% DistributionMapping::Distribute() 1 9.22e-07 1.084e-06 1.229e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-11-g659351846da6) finalized