MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-12-g4f639294606d) initialized Starting run at 05:39:19 UTC on 2022-08-15. Successfully read inputs file ... Castro git describe: 22.08-11-ga978fcf88 AMReX git describe: 22.08-12-g4f6392946 Microphysics git describe: 22.08-2-gd7421d4a reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016236119 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.359792139 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.34225493 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.341800339 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.34334443 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.356197533 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.354938137 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.340236003 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.34024772 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.339856827 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.340253003 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010493917 seconds Ending run at 05:39:23 UTC on 2022-08-15. Run time = 3.686179636 Run time without initialization = 3.477203911 Average number of zones advanced per microsecond: 0.754 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.686 ... 3.686 ... 3.686 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1187 2.4268 2.5287 68.60% Castro::do_advance_ctu() 10 0.03646 0.139 0.4502 12.21% Gravity::make_radial_gravity() 21 0.3399 0.3524 0.3791 10.28% Castro::initData() 1 0.03915 0.08388 0.1395 3.78% Castro::estTimeStep() 21 0.04066 0.08515 0.1298 3.52% FabArray::ParallelCopy_finish() 41 0.04308 0.06236 0.1269 3.44% FabArray::setVal() 143 0.0572 0.06802 0.07078 1.92% Castro::reset_internal_energy(Fab) 1008 0.0465 0.04997 0.05174 1.40% FabArray::ParallelCopy_nowait() 41 0.02744 0.0445 0.04993 1.35% StateData::FillBoundary(geom) 41 0.03592 0.0426 0.0466 1.26% Castro::normalize_species() 62 0.04116 0.04169 0.0425 1.15% FillPatchIterator::Initialize 41 0.02424 0.03611 0.04052 1.10% Gravity::interpolate_monopole_grav() 21 0.02593 0.0272 0.02767 0.75% Castro::construct_new_gravity_source() 10 0.02019 0.02288 0.02384 0.65% Castro::expand_state() 10 0.009776 0.01896 0.02251 0.61% Castro::computeTemp() 63 0.01733 0.01904 0.01984 0.54% Castro::initialize_do_advance() 10 0.01044 0.01752 0.01955 0.53% VisMF::Write(FabArray) 2 0.01303 0.01366 0.01647 0.45% MultiFab::Saxpy() 20 0.008609 0.01433 0.01629 0.44% Amr::writePlotFile() 2 0.01051 0.01325 0.014 0.38% Gravity::get_new_grav_vector() 11 0.007488 0.01151 0.01276 0.35% FabArray::setDomainBndry() 41 0.004744 0.01044 0.01254 0.34% Castro::construct_old_gravity_source() 10 0.004903 0.01001 0.0118 0.32% MultiFab::contains_nan() 20 0.009389 0.01077 0.01169 0.32% Gravity::get_old_grav_vector() 10 0.005516 0.00958 0.01106 0.30% Castro::initMFs() 1 0.006629 0.007751 0.0103 0.28% Castro::initialize_advance() 10 0.003247 0.008738 0.01007 0.27% StateData::define() 4 0.005647 0.006461 0.008333 0.23% main() 1 0.00634 0.006667 0.007056 0.19% Castro::construct_new_source() 50 0.004732 0.00648 0.007054 0.19% Castro::enforce_min_density() 62 0.0052 0.006017 0.006262 0.17% Castro::swap_state_time_levels() 10 0.003351 0.004421 0.004662 0.13% Amr::coarseTimeStep() 10 0.0008608 0.001866 0.003672 0.10% Castro::buildMetrics() 1 0.001563 0.001807 0.002363 0.06% Castro::finalize_do_advance() 10 0.0006492 0.001369 0.001671 0.05% Amr::InitAmr() 1 0.0002688 0.0003491 0.0006315 0.02% Amr::timeStep() 10 0.000183 0.0002633 0.0005801 0.02% DistributionMapping::LeastUsedCPUs() 1 1.042e-05 0.0003771 0.0004763 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002871 0.0003049 0.000325 0.01% Castro::clean_state() 62 0.0001525 0.0001681 0.0001813 0.00% StateDataPhysBCFunct::() 41 9.635e-05 0.0001235 0.0001441 0.00% Castro::enforce_consistent_e() 1 8.309e-05 9.13e-05 0.0001215 0.00% FabArray::ParallelCopy() 41 6.012e-05 8.352e-05 9.771e-05 0.00% Amr::FinalizeInit() 1 3.617e-06 1.566e-05 9.385e-05 0.00% Castro::construct_old_source() 50 3.741e-05 7.014e-05 8.97e-05 0.00% Castro::do_old_sources() 10 3.658e-05 6.609e-05 8.042e-05 0.00% Castro::do_new_sources() 10 3.901e-05 6.704e-05 7.839e-05 0.00% Castro::Castro() 1 5.155e-05 6.547e-05 7.627e-05 0.00% Castro::construct_old_gravity() 10 2.74e-05 5.059e-05 6.939e-05 0.00% FillPatchSingleLevel 41 5.792e-05 6.552e-05 6.916e-05 0.00% Amr::writeSmallPlotFile() 1 3.213e-05 6.101e-05 6.841e-05 0.00% FabArrayBase::getCPC() 41 5.207e-05 5.652e-05 6.793e-05 0.00% Castro::advance() 10 3.001e-05 4.524e-05 6.709e-05 0.00% Castro::subcycle_advance_ctu() 10 2.789e-05 4.827e-05 6.226e-05 0.00% Castro::finalize_advance() 10 5.021e-05 5.429e-05 5.96e-05 0.00% Castro::apply_source_to_state() 20 3.333e-05 4.941e-05 5.951e-05 0.00% Castro::construct_new_gravity() 10 4.296e-05 4.531e-05 5.05e-05 0.00% Amr::defBaseLevel() 1 3.553e-05 3.885e-05 4.462e-05 0.00% Castro::check_for_nan() 20 2.075e-05 2.503e-05 3.455e-05 0.00% FabArrayBase::CPC::define() 2 2.143e-05 2.595e-05 3.386e-05 0.00% Castro::enforce_speed_limit() 62 2.322e-05 2.818e-05 3.311e-05 0.00% Castro::post_timestep() 10 1.412e-05 1.814e-05 2.485e-05 0.00% Gravity::swapTimeLevels() 10 5.025e-06 1.173e-05 1.63e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.232e-06 1.076e-05 1.588e-05 0.00% Amr::InitializeInit() 1 1.971e-06 4.969e-06 1.566e-05 0.00% Amr::initSubcycle() 1 7.997e-06 9.785e-06 1.376e-05 0.00% Amr::init() 1 1.953e-06 3.555e-06 1.274e-05 0.00% Castro::create_source_corrector() 10 5.786e-06 9.924e-06 1.199e-05 0.00% Castro::computeNewDt() 9 8.399e-06 9.734e-06 1.123e-05 0.00% Castro::FluxRegCrseInit 10 6.515e-06 8.395e-06 1.07e-05 0.00% Gravity::set_mass_offset() 10 5.985e-06 8.467e-06 9.596e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.753e-06 5.366e-06 8.271e-06 0.00% Castro::retry_advance_ctu() 10 3.999e-06 6.022e-06 7.463e-06 0.00% Castro::computeInitialDt() 2 3.006e-06 3.853e-06 4.866e-06 0.00% Castro::post_init() 1 3.407e-06 3.749e-06 4.222e-06 0.00% Castro::post_regrid() 1 1.851e-06 2.571e-06 3.866e-06 0.00% Castro::FluxRegFineAdd() 10 1.804e-06 2.329e-06 2.653e-06 0.00% Amr::initialInit() 1 1.697e-06 1.933e-06 2.197e-06 0.00% DistributionMapping::Distribute() 1 9.31e-07 1.109e-06 1.342e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.686 3.686 3.686 100.00% Amr::coarseTimeStep() 10 3.46 3.46 3.46 93.86% Amr::timeStep() 10 3.448 3.45 3.451 93.61% Castro::advance() 10 3.433 3.433 3.433 93.14% Castro::subcycle_advance_ctu() 10 3.361 3.364 3.374 91.53% Castro::do_advance_ctu() 10 3.361 3.364 3.374 91.53% Castro::construct_ctu_hydro_source() 10 2.119 2.427 2.529 68.60% Gravity::make_radial_gravity() 21 0.3399 0.3524 0.3791 10.28% Gravity::get_new_grav_vector() 11 0.227 0.2322 0.2336 6.34% Castro::construct_old_gravity() 10 0.1995 0.2099 0.2305 6.25% Gravity::get_old_grav_vector() 10 0.1985 0.2091 0.23 6.24% FillPatchIterator::Initialize 41 0.1909 0.1964 0.2195 5.95% Amr::init() 1 0.2082 0.2085 0.2086 5.66% Castro::construct_new_gravity() 10 0.2008 0.2052 0.2066 5.60% Amr::initialInit() 1 0.1918 0.1922 0.1924 5.22% FillPatchSingleLevel 41 0.1395 0.1498 0.1905 5.17% Castro::initialize_do_advance() 10 0.1625 0.1796 0.1859 5.04% Amr::InitializeInit() 1 0.05976 0.1063 0.1621 4.40% Amr::defBaseLevel() 1 0.05975 0.1063 0.1621 4.40% FabArray::ParallelCopy() 41 0.09273 0.107 0.1544 4.19% Castro::initData() 1 0.04307 0.08776 0.1438 3.90% Castro::expand_state() 10 0.1186 0.1321 0.1363 3.70% Amr::FinalizeInit() 1 0.03014 0.0859 0.1324 3.59% Castro::estTimeStep() 21 0.04066 0.08515 0.1298 3.52% FabArray::ParallelCopy_finish() 41 0.04308 0.06236 0.1269 3.44% Castro::clean_state() 62 0.1095 0.1163 0.1185 3.22% Castro::computeInitialDt() 2 0.001744 0.05751 0.1041 2.82% Castro::initialize_advance() 10 0.05838 0.06932 0.07211 1.96% Castro::computeTemp() 63 0.06414 0.06931 0.07189 1.95% FabArray::setVal() 143 0.0572 0.06802 0.07078 1.92% Castro::do_new_sources() 10 0.05358 0.06304 0.06485 1.76% Castro::reset_internal_energy(MultiFab) 63 0.04681 0.05027 0.05205 1.41% Castro::reset_internal_energy(Fab) 1008 0.0465 0.04997 0.05174 1.40% FabArray::ParallelCopy_nowait() 41 0.02752 0.04459 0.05001 1.36% Castro::do_old_sources() 10 0.03213 0.04493 0.04861 1.32% StateDataPhysBCFunct::() 41 0.03602 0.04273 0.04673 1.27% StateData::FillBoundary(geom) 41 0.03592 0.0426 0.0466 1.26% Castro::normalize_species() 62 0.04116 0.04169 0.0425 1.15% Castro::construct_new_source() 50 0.02493 0.02936 0.03061 0.83% Castro::post_init() 1 0.02752 0.0277 0.02787 0.76% Gravity::interpolate_monopole_grav() 21 0.02593 0.0272 0.02767 0.75% Amr::writePlotFile() 2 0.02675 0.0269 0.02705 0.73% Castro::construct_new_gravity_source() 10 0.02019 0.02288 0.02384 0.65% Castro::post_timestep() 10 0.01495 0.01605 0.01653 0.45% VisMF::Write(FabArray) 2 0.01303 0.01366 0.01647 0.45% Castro::apply_source_to_state() 20 0.008643 0.01438 0.01635 0.44% MultiFab::Saxpy() 20 0.008609 0.01433 0.01629 0.44% Castro::Castro() 1 0.01039 0.01163 0.0145 0.39% FabArray::setDomainBndry() 41 0.004744 0.01044 0.01254 0.34% Castro::construct_old_source() 50 0.00494 0.01008 0.01189 0.32% Castro::construct_old_gravity_source() 10 0.004903 0.01001 0.0118 0.32% Castro::check_for_nan() 20 0.00941 0.0108 0.01171 0.32% MultiFab::contains_nan() 20 0.009389 0.01077 0.01169 0.32% Castro::initMFs() 1 0.006629 0.007751 0.0103 0.28% AmrLevel::AmrLevel(dm) 1 0.005655 0.006472 0.008346 0.23% StateData::define() 4 0.005647 0.006461 0.008333 0.23% Castro::computeNewDt() 9 0.007362 0.007368 0.007372 0.20% Castro::enforce_min_density() 62 0.0052 0.006017 0.006262 0.17% Castro::swap_state_time_levels() 10 0.003351 0.004421 0.004662 0.13% Castro::buildMetrics() 1 0.001672 0.001951 0.002585 0.07% Castro::post_regrid() 1 0.001506 0.001603 0.001802 0.05% Castro::finalize_do_advance() 10 0.0006492 0.001369 0.001671 0.05% Amr::InitAmr() 1 0.0002778 0.0003589 0.0006449 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.592e-05 0.0003836 0.0004852 0.01% DistributionMapping::LeastUsedCPUs() 1 1.042e-05 0.0003771 0.0004763 0.01% Castro::enforce_consistent_e() 1 8.309e-05 9.13e-05 0.0001215 0.00% FabArrayBase::getCPC() 41 7.594e-05 8.247e-05 9.333e-05 0.00% Castro::finalize_advance() 10 5.853e-05 6.502e-05 6.974e-05 0.00% Amr::writeSmallPlotFile() 1 3.213e-05 6.101e-05 6.841e-05 0.00% FabArrayBase::CPC::define() 2 2.143e-05 2.595e-05 3.386e-05 0.00% Castro::enforce_speed_limit() 62 2.322e-05 2.818e-05 3.311e-05 0.00% Gravity::swapTimeLevels() 10 5.025e-06 1.173e-05 1.63e-05 0.00% Amr::initSubcycle() 1 7.997e-06 9.785e-06 1.376e-05 0.00% Castro::create_source_corrector() 10 5.786e-06 9.924e-06 1.199e-05 0.00% Castro::FluxRegCrseInit 10 6.515e-06 8.395e-06 1.07e-05 0.00% Gravity::set_mass_offset() 10 5.985e-06 8.467e-06 9.596e-06 0.00% Castro::retry_advance_ctu() 10 3.999e-06 6.022e-06 7.463e-06 0.00% Castro::FluxRegFineAdd() 10 1.804e-06 2.329e-06 2.653e-06 0.00% DistributionMapping::Distribute() 1 9.31e-07 1.109e-06 1.342e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-12-g4f639294606d) finalized