MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-13-gbd5f6a9f6a1a) initialized Starting run at 05:39:31 UTC on 2022-08-16. Successfully read inputs file ... Castro git describe: 22.08-11-ga978fcf88 AMReX git describe: 22.08-13-gbd5f6a9f6 Microphysics git describe: 22.08-2-gd7421d4a reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.019083367 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.417711489 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.34774835 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.345547186 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.345339941 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.354999205 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.347361924 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.341978435 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.342239525 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.349130517 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.343236246 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010587068 seconds Ending run at 05:39:35 UTC on 2022-08-16. Run time = 3.764604884 Run time without initialization = 3.553480236 Average number of zones advanced per microsecond: 0.738 Average number of zones advanced per microsecond per rank: 0.092 TinyProfiler total time across processes [min...avg...max]: 3.762 ... 3.764 ... 3.765 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1573 2.4383 2.5500 67.74% Castro::do_advance_ctu() 10 0.06056 0.1753 0.4581 12.17% Gravity::make_radial_gravity() 21 0.3661 0.3826 0.4099 10.89% FabArray::ParallelCopy_finish() 41 0.0401 0.06709 0.1337 3.55% Castro::initData() 1 0.06703 0.09747 0.1179 3.13% Castro::estTimeStep() 21 0.02814 0.05327 0.1007 2.68% FabArray::setVal() 143 0.05169 0.06508 0.069 1.83% Castro::reset_internal_energy(Fab) 1008 0.04707 0.05198 0.05444 1.45% StateData::FillBoundary(geom) 41 0.03814 0.04482 0.05171 1.37% FabArray::ParallelCopy_nowait() 41 0.02818 0.04473 0.05088 1.35% Castro::normalize_species() 62 0.04049 0.04337 0.04542 1.21% FillPatchIterator::Initialize 41 0.026 0.0371 0.04212 1.12% Gravity::interpolate_monopole_grav() 21 0.02658 0.02818 0.02937 0.78% Castro::construct_new_gravity_source() 10 0.01919 0.02271 0.02434 0.65% Castro::computeTemp() 63 0.01786 0.02013 0.02176 0.58% Castro::initialize_do_advance() 10 0.01038 0.01822 0.02087 0.55% Castro::expand_state() 10 0.009797 0.01777 0.02079 0.55% Amr::writePlotFile() 2 0.01234 0.01631 0.01812 0.48% VisMF::Write(FabArray) 2 0.01275 0.01416 0.01757 0.47% MultiFab::Saxpy() 20 0.00876 0.01435 0.01695 0.45% MultiFab::contains_nan() 20 0.009419 0.01154 0.01507 0.40% Gravity::get_new_grav_vector() 11 0.00756 0.01159 0.01335 0.35% FabArray::setDomainBndry() 41 0.005028 0.009927 0.01184 0.31% Castro::construct_old_gravity_source() 10 0.005013 0.009954 0.0116 0.31% Gravity::get_old_grav_vector() 10 0.005479 0.009443 0.01153 0.31% Castro::initMFs() 1 0.006636 0.008674 0.01137 0.30% Castro::initialize_advance() 10 0.007114 0.01015 0.0112 0.30% StateData::define() 4 0.005646 0.007298 0.009325 0.25% Castro::construct_new_source() 50 0.004893 0.006551 0.007321 0.19% Castro::enforce_min_density() 62 0.005125 0.006207 0.007055 0.19% main() 1 0.004071 0.006035 0.007002 0.19% Castro::swap_state_time_levels() 10 0.004157 0.005136 0.00649 0.17% Amr::coarseTimeStep() 10 0.0008314 0.001997 0.004163 0.11% Castro::buildMetrics() 1 0.001583 0.002047 0.002643 0.07% Castro::finalize_do_advance() 10 0.0006517 0.001567 0.001815 0.05% Amr::InitAmr() 1 0.0002671 0.0004242 0.0006376 0.02% Amr::timeStep() 10 0.0001706 0.0002444 0.0005049 0.01% DistributionMapping::LeastUsedCPUs() 1 9.533e-06 0.0002733 0.0004603 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002786 0.0003267 0.0003915 0.01% Castro::clean_state() 62 0.0001104 0.0001511 0.000173 0.00% StateDataPhysBCFunct::() 41 8.112e-05 0.0001245 0.0001595 0.00% Castro::enforce_consistent_e() 1 8.486e-05 0.0001137 0.0001569 0.00% Castro::Castro() 1 5.299e-05 7.268e-05 0.0001025 0.00% FabArray::ParallelCopy() 41 6.402e-05 8.408e-05 9.755e-05 0.00% Amr::FinalizeInit() 1 3.979e-06 1.618e-05 9.3e-05 0.00% Castro::construct_old_source() 50 2.808e-05 7.052e-05 9.083e-05 0.00% Castro::do_new_sources() 10 3.828e-05 7.133e-05 8.64e-05 0.00% FillPatchSingleLevel 41 5.999e-05 7.117e-05 8.473e-05 0.00% Castro::do_old_sources() 10 3.724e-05 6.999e-05 8.377e-05 0.00% FabArrayBase::getCPC() 41 3.706e-05 5.632e-05 7.612e-05 0.00% Amr::writeSmallPlotFile() 1 2.541e-05 5.026e-05 6.795e-05 0.00% Castro::finalize_advance() 10 5.258e-05 5.842e-05 6.411e-05 0.00% Castro::apply_source_to_state() 20 2.627e-05 4.823e-05 5.989e-05 0.00% Castro::construct_old_gravity() 10 2.688e-05 4.906e-05 5.894e-05 0.00% Castro::subcycle_advance_ctu() 10 2.981e-05 4.663e-05 5.825e-05 0.00% Castro::construct_new_gravity() 10 3.244e-05 4.423e-05 5.502e-05 0.00% Castro::advance() 10 2.902e-05 4.381e-05 5.184e-05 0.00% Amr::defBaseLevel() 1 3.47e-05 4.069e-05 4.433e-05 0.00% FabArrayBase::CPC::define() 2 2.273e-05 3.171e-05 3.973e-05 0.00% Castro::enforce_speed_limit() 62 2.115e-05 2.832e-05 3.563e-05 0.00% Castro::check_for_nan() 20 2.017e-05 2.529e-05 3.337e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.699e-06 1.86e-05 2.644e-05 0.00% Castro::post_timestep() 10 1.269e-05 1.582e-05 1.836e-05 0.00% Castro::create_source_corrector() 10 6.629e-06 1.16e-05 1.757e-05 0.00% Gravity::swapTimeLevels() 10 5.487e-06 1.26e-05 1.725e-05 0.00% Amr::initSubcycle() 1 8.098e-06 1.195e-05 1.616e-05 0.00% Castro::FluxRegCrseInit 10 5.215e-06 8.85e-06 1.567e-05 0.00% Amr::InitializeInit() 1 1.991e-06 5.109e-06 1.468e-05 0.00% Castro::computeNewDt() 9 7.339e-06 9.269e-06 1.137e-05 0.00% Gravity::set_mass_offset() 10 5.847e-06 9.005e-06 1.117e-05 0.00% Castro::retry_advance_ctu() 10 4.384e-06 5.774e-06 7.598e-06 0.00% Castro::computeInitialDt() 2 3.766e-06 4.573e-06 6.528e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.624e-06 4.711e-06 5.865e-06 0.00% Castro::post_regrid() 1 2.69e-06 3.771e-06 5.646e-06 0.00% Castro::post_init() 1 3.035e-06 4.081e-06 5.537e-06 0.00% Castro::FluxRegFineAdd() 10 1.939e-06 2.757e-06 3.249e-06 0.00% Amr::init() 1 2.129e-06 2.432e-06 2.972e-06 0.00% Amr::initialInit() 1 1.134e-06 1.876e-06 2.669e-06 0.00% DistributionMapping::Distribute() 1 9.29e-07 1.263e-06 1.64e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.762 3.764 3.765 100.00% Amr::coarseTimeStep() 10 3.536 3.536 3.536 93.93% Amr::timeStep() 10 3.523 3.525 3.526 93.67% Castro::advance() 10 3.508 3.509 3.509 93.21% Castro::subcycle_advance_ctu() 10 3.434 3.438 3.449 91.62% Castro::do_advance_ctu() 10 3.433 3.438 3.449 91.62% Castro::construct_ctu_hydro_source() 10 2.157 2.438 2.55 67.74% Gravity::make_radial_gravity() 21 0.3661 0.3826 0.4099 10.89% Castro::construct_old_gravity() 10 0.217 0.229 0.2488 6.61% Gravity::get_new_grav_vector() 11 0.245 0.2473 0.2486 6.60% Gravity::get_old_grav_vector() 10 0.2163 0.2283 0.2482 6.59% FillPatchIterator::Initialize 41 0.1882 0.204 0.2313 6.15% Amr::init() 1 0.2103 0.2105 0.2107 5.60% Castro::construct_new_gravity() 10 0.2064 0.2079 0.2093 5.56% FillPatchSingleLevel 41 0.1356 0.157 0.2003 5.32% Amr::initialInit() 1 0.1902 0.1907 0.191 5.07% Castro::initialize_do_advance() 10 0.1754 0.1825 0.1902 5.05% FabArray::ParallelCopy() 41 0.08903 0.112 0.162 4.30% Amr::InitializeInit() 1 0.08815 0.1225 0.1468 3.90% Amr::defBaseLevel() 1 0.08814 0.1225 0.1468 3.90% Castro::expand_state() 10 0.1245 0.1326 0.1382 3.67% FabArray::ParallelCopy_finish() 41 0.0401 0.06709 0.1337 3.55% Castro::clean_state() 62 0.11 0.1209 0.1263 3.35% Castro::initData() 1 0.07127 0.1022 0.1218 3.23% Amr::FinalizeInit() 1 0.04421 0.06825 0.1021 2.71% Castro::estTimeStep() 21 0.02814 0.05327 0.1007 2.68% Castro::computeTemp() 63 0.0652 0.07243 0.07659 2.03% Castro::initialize_advance() 10 0.05863 0.07075 0.07535 2.00% FabArray::setVal() 143 0.05169 0.06508 0.069 1.83% Castro::do_new_sources() 10 0.05077 0.06199 0.06555 1.74% Castro::computeInitialDt() 2 0.002535 0.02707 0.06155 1.63% Castro::reset_internal_energy(MultiFab) 63 0.04735 0.05231 0.05483 1.46% Castro::reset_internal_energy(Fab) 1008 0.04707 0.05198 0.05444 1.45% StateDataPhysBCFunct::() 41 0.03823 0.04495 0.05187 1.38% StateData::FillBoundary(geom) 41 0.03814 0.04482 0.05171 1.37% FabArray::ParallelCopy_nowait() 41 0.02825 0.04482 0.05097 1.35% Castro::do_old_sources() 10 0.03289 0.04599 0.04994 1.33% Castro::normalize_species() 62 0.04049 0.04337 0.04542 1.21% Castro::post_init() 1 0.03989 0.04025 0.04072 1.08% Castro::construct_new_source() 50 0.02409 0.02926 0.03166 0.84% Amr::writePlotFile() 2 0.02991 0.03047 0.0311 0.83% Gravity::interpolate_monopole_grav() 21 0.02658 0.02818 0.02937 0.78% Castro::construct_new_gravity_source() 10 0.01919 0.02271 0.02434 0.65% VisMF::Write(FabArray) 2 0.01275 0.01416 0.01757 0.47% Castro::post_timestep() 10 0.01473 0.01619 0.01737 0.46% Castro::apply_source_to_state() 20 0.008787 0.01439 0.017 0.45% MultiFab::Saxpy() 20 0.00876 0.01435 0.01695 0.45% Castro::Castro() 1 0.01014 0.01264 0.01589 0.42% Castro::check_for_nan() 20 0.00944 0.01156 0.01511 0.40% MultiFab::contains_nan() 20 0.009419 0.01154 0.01507 0.40% FabArray::setDomainBndry() 41 0.005028 0.009927 0.01184 0.31% Castro::construct_old_source() 50 0.005041 0.01002 0.01168 0.31% Castro::construct_old_gravity_source() 10 0.005013 0.009954 0.0116 0.31% Castro::initMFs() 1 0.006636 0.008674 0.01137 0.30% AmrLevel::AmrLevel(dm) 1 0.005663 0.007316 0.009341 0.25% StateData::define() 4 0.005646 0.007298 0.009325 0.25% Castro::computeNewDt() 9 0.007354 0.007364 0.007375 0.20% Castro::enforce_min_density() 62 0.005125 0.006207 0.007055 0.19% Castro::swap_state_time_levels() 10 0.004157 0.005136 0.00649 0.17% Castro::post_regrid() 1 0.001527 0.002251 0.002943 0.08% Castro::buildMetrics() 1 0.001692 0.002215 0.002881 0.08% Castro::finalize_do_advance() 10 0.0006517 0.001567 0.001815 0.05% Amr::InitAmr() 1 0.0002761 0.0004361 0.000651 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.497e-05 0.0002793 0.0004674 0.01% DistributionMapping::LeastUsedCPUs() 1 9.533e-06 0.0002733 0.0004603 0.01% Castro::enforce_consistent_e() 1 8.486e-05 0.0001137 0.0001569 0.00% FabArrayBase::getCPC() 41 7.679e-05 8.802e-05 0.0001149 0.00% Castro::finalize_advance() 10 6.072e-05 7.003e-05 7.762e-05 0.00% Amr::writeSmallPlotFile() 1 2.541e-05 5.026e-05 6.795e-05 0.00% FabArrayBase::CPC::define() 2 2.273e-05 3.171e-05 3.973e-05 0.00% Castro::enforce_speed_limit() 62 2.115e-05 2.832e-05 3.563e-05 0.00% Castro::create_source_corrector() 10 6.629e-06 1.16e-05 1.757e-05 0.00% Gravity::swapTimeLevels() 10 5.487e-06 1.26e-05 1.725e-05 0.00% Amr::initSubcycle() 1 8.098e-06 1.195e-05 1.616e-05 0.00% Castro::FluxRegCrseInit 10 5.215e-06 8.85e-06 1.567e-05 0.00% Gravity::set_mass_offset() 10 5.847e-06 9.005e-06 1.117e-05 0.00% Castro::retry_advance_ctu() 10 4.384e-06 5.774e-06 7.598e-06 0.00% Castro::FluxRegFineAdd() 10 1.939e-06 2.757e-06 3.249e-06 0.00% DistributionMapping::Distribute() 1 9.29e-07 1.263e-06 1.64e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-13-gbd5f6a9f6a1a) finalized