MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-13-gbd5f6a9f6a1a) initialized Starting run at 05:39:20 UTC on 2022-08-17. Successfully read inputs file ... Castro git describe: 22.08-11-ga978fcf88 AMReX git describe: 22.08-13-gbd5f6a9f6 Microphysics git describe: 22.08-3-gfe93b5a1 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015599517 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.373497952 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.353534787 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.346878927 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.347096508 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.360726204 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.35424917 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.339527643 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339159396 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.338185237 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.33908216 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010272161 seconds Ending run at 05:39:24 UTC on 2022-08-17. Run time = 3.706874766 Run time without initialization = 3.510244704 Average number of zones advanced per microsecond: 0.747 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.704 ... 3.706 ... 3.707 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1411 2.4330 2.5400 68.52% Castro::do_advance_ctu() 10 0.02871 0.1396 0.4362 11.77% Gravity::make_radial_gravity() 21 0.3429 0.3555 0.3768 10.16% Castro::initData() 1 0.04229 0.08478 0.1286 3.47% Castro::estTimeStep() 21 0.03066 0.07294 0.1167 3.15% FabArray::ParallelCopy_finish() 41 0.04734 0.06323 0.107 2.89% FabArray::setVal() 143 0.07044 0.07219 0.07328 1.98% Castro::reset_internal_energy(Fab) 1008 0.04622 0.05072 0.0524 1.41% FabArray::ParallelCopy_nowait() 41 0.03157 0.04657 0.05171 1.40% StateData::FillBoundary(geom) 41 0.03676 0.04333 0.04753 1.28% Castro::normalize_species() 62 0.03999 0.04144 0.04198 1.13% FillPatchIterator::Initialize 41 0.02483 0.03783 0.04175 1.13% Gravity::interpolate_monopole_grav() 21 0.02581 0.02736 0.02789 0.75% Castro::construct_new_gravity_source() 10 0.0234 0.0238 0.02462 0.66% Castro::expand_state() 10 0.01267 0.0208 0.02361 0.64% Castro::initialize_do_advance() 10 0.0155 0.01943 0.02104 0.57% Castro::computeTemp() 63 0.01676 0.01927 0.01997 0.54% MultiFab::Saxpy() 20 0.01136 0.01503 0.01653 0.45% VisMF::Write(FabArray) 2 0.01215 0.01284 0.01546 0.42% Gravity::get_new_grav_vector() 11 0.01066 0.01272 0.01386 0.37% Amr::writePlotFile() 2 0.01062 0.01316 0.01377 0.37% FabArray::setDomainBndry() 41 0.005934 0.01132 0.01294 0.35% MultiFab::contains_nan() 20 0.01014 0.01133 0.01234 0.33% Castro::construct_old_gravity_source() 10 0.007167 0.01089 0.01232 0.33% Gravity::get_old_grav_vector() 10 0.006484 0.01019 0.01169 0.32% Castro::initialize_advance() 10 0.01057 0.01093 0.01164 0.31% Castro::initMFs() 1 0.00695 0.007479 0.007803 0.21% Castro::construct_new_source() 50 0.005144 0.006666 0.007291 0.20% main() 1 0.004671 0.006747 0.00726 0.20% Castro::enforce_min_density() 62 0.005965 0.006246 0.006699 0.18% StateData::define() 4 0.00577 0.006189 0.006462 0.17% Castro::swap_state_time_levels() 10 0.003493 0.004692 0.004881 0.13% Amr::coarseTimeStep() 10 0.0008947 0.001848 0.003777 0.10% Castro::finalize_do_advance() 10 0.001729 0.002049 0.002298 0.06% Castro::buildMetrics() 1 0.001673 0.001782 0.001858 0.05% Amr::timeStep() 10 0.0001909 0.0002716 0.000575 0.02% Amr::InitAmr() 1 0.0002582 0.0002949 0.0003935 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002929 0.0003082 0.0003218 0.01% Castro::clean_state() 62 0.0001442 0.0001722 0.0002018 0.01% DistributionMapping::LeastUsedCPUs() 1 8.674e-06 0.0001123 0.0001481 0.00% StateDataPhysBCFunct::() 41 0.0001107 0.0001328 0.0001469 0.00% FabArray::ParallelCopy() 41 7.253e-05 8.32e-05 9.784e-05 0.00% Castro::enforce_consistent_e() 1 8.209e-05 8.825e-05 9.555e-05 0.00% Castro::construct_old_source() 50 4.807e-05 7.521e-05 9.257e-05 0.00% Amr::FinalizeInit() 1 3.506e-06 1.523e-05 9.087e-05 0.00% Castro::do_old_sources() 10 5.114e-05 7.334e-05 8.702e-05 0.00% Castro::do_new_sources() 10 4.938e-05 7.204e-05 8.439e-05 0.00% FabArrayBase::getCPC() 41 4.873e-05 5.665e-05 7.575e-05 0.00% FillPatchSingleLevel 41 6.22e-05 6.883e-05 7.422e-05 0.00% Castro::Castro() 1 5.715e-05 6.411e-05 7.364e-05 0.00% Castro::finalize_advance() 10 5.124e-05 5.777e-05 7.189e-05 0.00% Amr::writeSmallPlotFile() 1 5.995e-05 6.404e-05 6.835e-05 0.00% Castro::subcycle_advance_ctu() 10 3.621e-05 5.49e-05 6.726e-05 0.00% Castro::construct_old_gravity() 10 3.938e-05 5.407e-05 6.68e-05 0.00% Castro::advance() 10 3.116e-05 4.741e-05 6.009e-05 0.00% Castro::apply_source_to_state() 20 4.259e-05 5.095e-05 5.909e-05 0.00% Castro::construct_new_gravity() 10 4.423e-05 4.889e-05 5.684e-05 0.00% Amr::defBaseLevel() 1 3.669e-05 4.439e-05 5.343e-05 0.00% Castro::enforce_speed_limit() 62 2.446e-05 2.762e-05 3.333e-05 0.00% FabArrayBase::CPC::define() 2 2.278e-05 2.537e-05 3.014e-05 0.00% Castro::check_for_nan() 20 2.066e-05 2.477e-05 2.898e-05 0.00% Castro::post_timestep() 10 1.475e-05 1.785e-05 2.433e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.415e-06 1.089e-05 1.718e-05 0.00% Gravity::swapTimeLevels() 10 8.869e-06 1.279e-05 1.628e-05 0.00% Castro::create_source_corrector() 10 7.43e-06 1.042e-05 1.301e-05 0.00% Gravity::set_mass_offset() 10 6.198e-06 9.604e-06 1.123e-05 0.00% Castro::FluxRegCrseInit 10 6.092e-06 8.652e-06 1.102e-05 0.00% Castro::computeNewDt() 9 7.501e-06 9.25e-06 1.077e-05 0.00% Amr::initSubcycle() 1 8.096e-06 9.031e-06 9.486e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.561e-06 4.73e-06 7.084e-06 0.00% Amr::InitializeInit() 1 2.115e-06 4.207e-06 7.075e-06 0.00% Castro::retry_advance_ctu() 10 4.394e-06 5.716e-06 6.683e-06 0.00% Castro::computeInitialDt() 2 3.946e-06 4.433e-06 5.415e-06 0.00% Castro::post_regrid() 1 1.726e-06 2.838e-06 5.139e-06 0.00% Castro::post_init() 1 3.116e-06 3.754e-06 4.812e-06 0.00% Castro::FluxRegFineAdd() 10 1.979e-06 2.344e-06 2.797e-06 0.00% Amr::init() 1 1.885e-06 2.273e-06 2.669e-06 0.00% Amr::initialInit() 1 1.329e-06 1.749e-06 2.13e-06 0.00% DistributionMapping::Distribute() 1 9.37e-07 1.131e-06 1.831e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.704 3.706 3.707 100.00% Amr::coarseTimeStep() 10 3.493 3.493 3.493 94.22% Amr::timeStep() 10 3.481 3.483 3.484 93.97% Castro::advance() 10 3.466 3.466 3.467 93.52% Castro::subcycle_advance_ctu() 10 3.391 3.393 3.395 91.58% Castro::do_advance_ctu() 10 3.391 3.392 3.395 91.58% Castro::construct_ctu_hydro_source() 10 2.141 2.433 2.54 68.52% Gravity::make_radial_gravity() 21 0.3429 0.3555 0.3768 10.16% Gravity::get_new_grav_vector() 11 0.2317 0.2364 0.2391 6.45% Castro::construct_old_gravity() 10 0.2 0.2119 0.2297 6.20% Gravity::get_old_grav_vector() 10 0.1991 0.2111 0.229 6.18% Castro::construct_new_gravity() 10 0.2066 0.2106 0.2129 5.74% FillPatchIterator::Initialize 41 0.1947 0.2026 0.2122 5.73% Castro::initialize_do_advance() 10 0.1714 0.1877 0.1966 5.30% Amr::init() 1 0.1961 0.1962 0.1962 5.29% Amr::initialInit() 1 0.1803 0.1805 0.1807 4.88% FillPatchSingleLevel 41 0.1412 0.1535 0.1757 4.74% Amr::InitializeInit() 1 0.06281 0.1067 0.1514 4.08% Amr::defBaseLevel() 1 0.0628 0.1067 0.1514 4.08% Castro::expand_state() 10 0.1272 0.1379 0.1453 3.92% FabArray::ParallelCopy() 41 0.09819 0.11 0.1387 3.74% Castro::initData() 1 0.04649 0.08882 0.1326 3.58% Castro::clean_state() 62 0.1091 0.1172 0.1203 3.25% Amr::FinalizeInit() 1 0.02904 0.07379 0.1175 3.17% Castro::estTimeStep() 21 0.03066 0.07294 0.1167 3.15% FabArray::ParallelCopy_finish() 41 0.04734 0.06323 0.107 2.89% Castro::computeInitialDt() 2 0.00174 0.04643 0.09026 2.43% Castro::initialize_advance() 10 0.07106 0.07361 0.07535 2.03% FabArray::setVal() 143 0.07044 0.07219 0.07328 1.98% Castro::computeTemp() 63 0.06327 0.0703 0.07267 1.96% Castro::do_new_sources() 10 0.06433 0.06522 0.06545 1.77% Castro::reset_internal_energy(MultiFab) 63 0.04651 0.05103 0.05272 1.42% Castro::reset_internal_energy(Fab) 1008 0.04622 0.05072 0.0524 1.41% FabArray::ParallelCopy_nowait() 41 0.03167 0.04665 0.05179 1.40% Castro::do_old_sources() 10 0.03843 0.04723 0.05029 1.36% StateDataPhysBCFunct::() 41 0.03688 0.04346 0.04766 1.29% StateData::FillBoundary(geom) 41 0.03676 0.04333 0.04753 1.28% Castro::normalize_species() 62 0.03999 0.04144 0.04198 1.13% Castro::construct_new_source() 50 0.02959 0.03046 0.03089 0.83% Gravity::interpolate_monopole_grav() 21 0.02581 0.02736 0.02789 0.75% Castro::post_init() 1 0.02641 0.02663 0.02682 0.72% Amr::writePlotFile() 2 0.02584 0.026 0.02615 0.71% Castro::construct_new_gravity_source() 10 0.0234 0.0238 0.02462 0.66% Castro::post_timestep() 10 0.01403 0.01605 0.01671 0.45% Castro::apply_source_to_state() 20 0.0114 0.01508 0.01659 0.45% MultiFab::Saxpy() 20 0.01136 0.01503 0.01653 0.45% VisMF::Write(FabArray) 2 0.01215 0.01284 0.01546 0.42% FabArray::setDomainBndry() 41 0.005934 0.01132 0.01294 0.35% Castro::construct_old_source() 50 0.007216 0.01096 0.01241 0.33% Castro::check_for_nan() 20 0.01016 0.01136 0.01237 0.33% MultiFab::contains_nan() 20 0.01014 0.01133 0.01234 0.33% Castro::construct_old_gravity_source() 10 0.007167 0.01089 0.01232 0.33% Castro::Castro() 1 0.01045 0.01156 0.01224 0.33% Castro::initMFs() 1 0.00695 0.007479 0.007803 0.21% Castro::computeNewDt() 9 0.007375 0.007387 0.007396 0.20% Castro::enforce_min_density() 62 0.005965 0.006246 0.006699 0.18% AmrLevel::AmrLevel(dm) 1 0.005779 0.0062 0.006479 0.17% StateData::define() 4 0.00577 0.006189 0.006462 0.17% Castro::swap_state_time_levels() 10 0.003493 0.004692 0.004881 0.13% Castro::finalize_do_advance() 10 0.001729 0.002049 0.002298 0.06% Castro::buildMetrics() 1 0.001788 0.001923 0.002007 0.05% Castro::post_regrid() 1 0.001572 0.001636 0.001696 0.05% Amr::InitAmr() 1 0.0002675 0.000304 0.0004016 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.317e-05 0.0001182 0.0001544 0.00% DistributionMapping::LeastUsedCPUs() 1 8.674e-06 0.0001123 0.0001481 0.00% FabArrayBase::getCPC() 41 7.359e-05 8.202e-05 0.0001004 0.00% Castro::enforce_consistent_e() 1 8.209e-05 8.825e-05 9.555e-05 0.00% Castro::finalize_advance() 10 5.969e-05 6.877e-05 8.497e-05 0.00% Amr::writeSmallPlotFile() 1 5.995e-05 6.404e-05 6.835e-05 0.00% Castro::enforce_speed_limit() 62 2.446e-05 2.762e-05 3.333e-05 0.00% FabArrayBase::CPC::define() 2 2.278e-05 2.537e-05 3.014e-05 0.00% Gravity::swapTimeLevels() 10 8.869e-06 1.279e-05 1.628e-05 0.00% Castro::create_source_corrector() 10 7.43e-06 1.042e-05 1.301e-05 0.00% Gravity::set_mass_offset() 10 6.198e-06 9.604e-06 1.123e-05 0.00% Castro::FluxRegCrseInit 10 6.092e-06 8.652e-06 1.102e-05 0.00% Amr::initSubcycle() 1 8.096e-06 9.031e-06 9.486e-06 0.00% Castro::retry_advance_ctu() 10 4.394e-06 5.716e-06 6.683e-06 0.00% Castro::FluxRegFineAdd() 10 1.979e-06 2.344e-06 2.797e-06 0.00% DistributionMapping::Distribute() 1 9.37e-07 1.131e-06 1.831e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-13-gbd5f6a9f6a1a) finalized