MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-13-gbd5f6a9f6a1a) initialized Starting run at 05:39:02 UTC on 2022-08-18. Successfully read inputs file ... Castro git describe: 22.08-11-ga978fcf88 AMReX git describe: 22.08-13-gbd5f6a9f6 Microphysics git describe: 22.08-3-gfe93b5a1 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015319362 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.359281077 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.345118534 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.344136579 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.343477714 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.354557438 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.351231184 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338789153 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339036362 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.339216269 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.343942628 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010774531 seconds Ending run at 05:39:06 UTC on 2022-08-18. Run time = 3.671852183 Run time without initialization = 3.477398636 Average number of zones advanced per microsecond: 0.754 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.669 ... 3.671 ... 3.672 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0821 2.4047 2.5238 68.73% Castro::do_advance_ctu() 10 0.02876 0.1482 0.4747 12.93% Gravity::make_radial_gravity() 21 0.3431 0.3532 0.375 10.21% Castro::initData() 1 0.04093 0.08201 0.1253 3.41% Castro::estTimeStep() 21 0.02756 0.0746 0.1177 3.21% FabArray::ParallelCopy_finish() 41 0.04581 0.06307 0.113 3.08% FabArray::setVal() 143 0.06967 0.07097 0.07182 1.96% Castro::reset_internal_energy(Fab) 1008 0.04795 0.05026 0.05206 1.42% FabArray::ParallelCopy_nowait() 41 0.02993 0.04512 0.05036 1.37% StateData::FillBoundary(geom) 41 0.03641 0.04241 0.04625 1.26% Castro::normalize_species() 62 0.03996 0.04138 0.04228 1.15% FillPatchIterator::Initialize 41 0.02364 0.03624 0.0406 1.11% Gravity::interpolate_monopole_grav() 21 0.0253 0.02716 0.02807 0.76% Castro::construct_new_gravity_source() 10 0.02123 0.02356 0.02512 0.68% Castro::expand_state() 10 0.01079 0.01913 0.02264 0.62% Castro::computeTemp() 63 0.01761 0.01927 0.02008 0.55% Castro::initialize_do_advance() 10 0.009739 0.01751 0.01996 0.54% MultiFab::Saxpy() 20 0.01103 0.01473 0.01623 0.44% VisMF::Write(FabArray) 2 0.01212 0.01292 0.01582 0.43% Amr::writePlotFile() 2 0.01052 0.01345 0.01441 0.39% Gravity::get_new_grav_vector() 11 0.009557 0.01208 0.01313 0.36% FabArray::setDomainBndry() 41 0.005043 0.01038 0.01223 0.33% Castro::construct_old_gravity_source() 10 0.005757 0.01053 0.01215 0.33% Castro::initialize_advance() 10 0.0106 0.01098 0.01185 0.32% MultiFab::contains_nan() 20 0.009762 0.01105 0.01166 0.32% Gravity::get_old_grav_vector() 10 0.005844 0.009554 0.01112 0.30% Castro::initMFs() 1 0.006836 0.008044 0.01004 0.27% StateData::define() 4 0.005727 0.006696 0.008353 0.23% Castro::construct_new_source() 50 0.005232 0.006661 0.00768 0.21% main() 1 0.004484 0.006619 0.00705 0.19% Castro::enforce_min_density() 62 0.005714 0.006139 0.006579 0.18% Castro::swap_state_time_levels() 10 0.003447 0.004627 0.004837 0.13% Amr::coarseTimeStep() 10 0.001021 0.001711 0.003249 0.09% Castro::buildMetrics() 1 0.001613 0.001899 0.002375 0.06% Castro::finalize_do_advance() 10 0.001726 0.002081 0.002374 0.06% Amr::timeStep() 10 0.000177 0.000242 0.0005432 0.01% Amr::InitAmr() 1 0.0002647 0.0003384 0.0004811 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002933 0.0003151 0.0003592 0.01% DistributionMapping::LeastUsedCPUs() 1 5.588e-06 0.0001866 0.0002722 0.01% Castro::clean_state() 62 0.0001391 0.0001651 0.0001843 0.01% StateDataPhysBCFunct::() 41 0.0001124 0.0001264 0.0001357 0.00% Amr::FinalizeInit() 1 3.281e-06 1.857e-05 0.000119 0.00% FabArray::ParallelCopy() 41 6.954e-05 8.633e-05 0.0001047 0.00% Castro::enforce_consistent_e() 1 7.8e-05 8.727e-05 9.771e-05 0.00% Castro::construct_old_source() 50 3.654e-05 7.351e-05 9.151e-05 0.00% Castro::do_old_sources() 10 3.99e-05 7.28e-05 8.957e-05 0.00% Castro::do_new_sources() 10 4.452e-05 6.976e-05 8.415e-05 0.00% FillPatchSingleLevel 41 5.964e-05 6.681e-05 8.01e-05 0.00% FabArrayBase::getCPC() 41 5.016e-05 5.744e-05 7.229e-05 0.00% Castro::advance() 10 3.121e-05 4.573e-05 7.214e-05 0.00% Castro::Castro() 1 5.131e-05 5.966e-05 7.118e-05 0.00% Amr::writeSmallPlotFile() 1 3.234e-05 5.756e-05 7.088e-05 0.00% Castro::subcycle_advance_ctu() 10 3.644e-05 5.153e-05 6.506e-05 0.00% Castro::apply_source_to_state() 20 4.312e-05 4.961e-05 6.104e-05 0.00% Castro::finalize_advance() 10 4.909e-05 5.4e-05 5.972e-05 0.00% Castro::construct_old_gravity() 10 3.569e-05 5.03e-05 5.801e-05 0.00% Castro::construct_new_gravity() 10 4.616e-05 4.992e-05 5.628e-05 0.00% Amr::defBaseLevel() 1 3.644e-05 4.08e-05 4.952e-05 0.00% FabArrayBase::CPC::define() 2 2.237e-05 2.545e-05 3.217e-05 0.00% Castro::enforce_speed_limit() 62 2.545e-05 2.729e-05 2.984e-05 0.00% Castro::post_timestep() 10 1.366e-05 1.921e-05 2.831e-05 0.00% Castro::check_for_nan() 20 1.999e-05 2.432e-05 2.793e-05 0.00% Gravity::swapTimeLevels() 10 6.344e-06 1.374e-05 2.451e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.379e-06 1.179e-05 1.599e-05 0.00% Amr::initSubcycle() 1 8.179e-06 1.029e-05 1.436e-05 0.00% Castro::create_source_corrector() 10 6.559e-06 1.062e-05 1.339e-05 0.00% Castro::post_init() 1 2.584e-06 6.058e-06 1.312e-05 0.00% Gravity::set_mass_offset() 10 6.383e-06 8.916e-06 1.191e-05 0.00% Castro::computeNewDt() 9 7.735e-06 9.157e-06 1.019e-05 0.00% Castro::FluxRegCrseInit 10 5.576e-06 8.203e-06 9.9e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.685e-06 4.858e-06 9.462e-06 0.00% Castro::retry_advance_ctu() 10 4.291e-06 5.941e-06 7.475e-06 0.00% Amr::InitializeInit() 1 2.286e-06 5.097e-06 7.027e-06 0.00% Castro::computeInitialDt() 2 3.014e-06 3.743e-06 4.809e-06 0.00% Castro::post_regrid() 1 1.944e-06 2.684e-06 3.659e-06 0.00% Amr::init() 1 1.747e-06 2.2e-06 2.87e-06 0.00% Castro::FluxRegFineAdd() 10 2.04e-06 2.366e-06 2.756e-06 0.00% Amr::initialInit() 1 1.261e-06 1.611e-06 1.823e-06 0.00% DistributionMapping::Distribute() 1 8.74e-07 1.093e-06 1.296e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.669 3.671 3.672 100.00% Amr::coarseTimeStep() 10 3.46 3.46 3.46 94.22% Amr::timeStep() 10 3.448 3.45 3.451 93.97% Castro::advance() 10 3.434 3.434 3.434 93.53% Castro::subcycle_advance_ctu() 10 3.359 3.36 3.362 91.57% Castro::do_advance_ctu() 10 3.359 3.36 3.362 91.57% Castro::construct_ctu_hydro_source() 10 2.082 2.405 2.524 68.73% Gravity::make_radial_gravity() 21 0.3431 0.3532 0.375 10.21% Gravity::get_new_grav_vector() 11 0.229 0.234 0.2362 6.43% Castro::construct_old_gravity() 10 0.2011 0.2101 0.2282 6.21% Gravity::get_old_grav_vector() 10 0.2002 0.2093 0.2275 6.20% Castro::construct_new_gravity() 10 0.2048 0.2091 0.2112 5.75% FillPatchIterator::Initialize 41 0.1903 0.1976 0.2084 5.68% Amr::init() 1 0.1938 0.194 0.1941 5.29% Castro::initialize_do_advance() 10 0.1627 0.1806 0.1887 5.14% FillPatchSingleLevel 41 0.1381 0.151 0.1797 4.89% Amr::initialInit() 1 0.178 0.1785 0.1787 4.87% Amr::InitializeInit() 1 0.06094 0.1044 0.1503 4.09% Amr::defBaseLevel() 1 0.06093 0.1044 0.1503 4.09% FabArray::ParallelCopy() 41 0.09462 0.1084 0.1431 3.90% Castro::expand_state() 10 0.1234 0.1328 0.1389 3.78% Castro::initData() 1 0.04473 0.08574 0.1291 3.52% Castro::clean_state() 62 0.1109 0.1166 0.1189 3.24% Castro::estTimeStep() 21 0.02756 0.0746 0.1177 3.21% Amr::FinalizeInit() 1 0.02765 0.07404 0.1175 3.20% FabArray::ParallelCopy_finish() 41 0.04581 0.06307 0.113 3.08% Castro::computeInitialDt() 2 0.001578 0.04767 0.09109 2.48% Castro::initialize_advance() 10 0.07154 0.07352 0.07501 2.04% Castro::computeTemp() 63 0.06587 0.06984 0.07245 1.97% FabArray::setVal() 143 0.06967 0.07097 0.07182 1.96% Castro::do_new_sources() 10 0.06213 0.06478 0.06583 1.79% Castro::reset_internal_energy(MultiFab) 63 0.04826 0.05057 0.05238 1.43% Castro::reset_internal_energy(Fab) 1008 0.04795 0.05026 0.05206 1.42% FabArray::ParallelCopy_nowait() 41 0.03002 0.04521 0.05045 1.37% Castro::do_old_sources() 10 0.03638 0.04661 0.04981 1.36% StateDataPhysBCFunct::() 41 0.03652 0.04254 0.04638 1.26% StateData::FillBoundary(geom) 41 0.03641 0.04241 0.04625 1.26% Castro::normalize_species() 62 0.03996 0.04138 0.04228 1.15% Castro::construct_new_source() 50 0.02647 0.03022 0.03156 0.86% Gravity::interpolate_monopole_grav() 21 0.0253 0.02716 0.02807 0.76% Amr::writePlotFile() 2 0.02624 0.02637 0.02667 0.73% Castro::post_init() 1 0.02546 0.02569 0.02587 0.70% Castro::construct_new_gravity_source() 10 0.02123 0.02356 0.02512 0.68% Castro::apply_source_to_state() 20 0.01107 0.01477 0.0163 0.44% MultiFab::Saxpy() 20 0.01103 0.01473 0.01623 0.44% Castro::post_timestep() 10 0.01446 0.01559 0.01608 0.44% VisMF::Write(FabArray) 2 0.01212 0.01292 0.01582 0.43% Castro::Castro() 1 0.01024 0.01173 0.01421 0.39% Castro::construct_old_source() 50 0.005794 0.0106 0.01223 0.33% FabArray::setDomainBndry() 41 0.005043 0.01038 0.01223 0.33% Castro::construct_old_gravity_source() 10 0.005757 0.01053 0.01215 0.33% Castro::check_for_nan() 20 0.009782 0.01107 0.01168 0.32% MultiFab::contains_nan() 20 0.009762 0.01105 0.01166 0.32% Castro::initMFs() 1 0.006836 0.008044 0.01004 0.27% AmrLevel::AmrLevel(dm) 1 0.005736 0.006708 0.008369 0.23% StateData::define() 4 0.005727 0.006696 0.008353 0.23% Castro::computeNewDt() 9 0.007008 0.007012 0.007016 0.19% Castro::enforce_min_density() 62 0.005714 0.006139 0.006579 0.18% Castro::swap_state_time_levels() 10 0.003447 0.004627 0.004837 0.13% Castro::buildMetrics() 1 0.00173 0.00205 0.0026 0.07% Castro::finalize_do_advance() 10 0.001726 0.002081 0.002374 0.06% Castro::post_regrid() 1 0.001524 0.001582 0.001642 0.04% Amr::InitAmr() 1 0.0002739 0.0003487 0.0004954 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.053e-05 0.0001925 0.0002814 0.01% DistributionMapping::LeastUsedCPUs() 1 5.588e-06 0.0001866 0.0002722 0.01% Castro::enforce_consistent_e() 1 7.8e-05 8.727e-05 9.771e-05 0.00% FabArrayBase::getCPC() 41 7.253e-05 8.289e-05 9.656e-05 0.00% Castro::finalize_advance() 10 5.671e-05 6.456e-05 7.157e-05 0.00% Amr::writeSmallPlotFile() 1 3.234e-05 5.756e-05 7.088e-05 0.00% FabArrayBase::CPC::define() 2 2.237e-05 2.545e-05 3.217e-05 0.00% Castro::enforce_speed_limit() 62 2.545e-05 2.729e-05 2.984e-05 0.00% Gravity::swapTimeLevels() 10 6.344e-06 1.374e-05 2.451e-05 0.00% Amr::initSubcycle() 1 8.179e-06 1.029e-05 1.436e-05 0.00% Castro::create_source_corrector() 10 6.559e-06 1.062e-05 1.339e-05 0.00% Gravity::set_mass_offset() 10 6.383e-06 8.916e-06 1.191e-05 0.00% Castro::FluxRegCrseInit 10 5.576e-06 8.203e-06 9.9e-06 0.00% Castro::retry_advance_ctu() 10 4.291e-06 5.941e-06 7.475e-06 0.00% Castro::FluxRegFineAdd() 10 2.04e-06 2.366e-06 2.756e-06 0.00% DistributionMapping::Distribute() 1 8.74e-07 1.093e-06 1.296e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-13-gbd5f6a9f6a1a) finalized