MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-15-gf270b3d5db8f) initialized Starting run at 05:39:23 UTC on 2022-08-19. Successfully read inputs file ... Castro git describe: 22.08-11-ga978fcf88 AMReX git describe: 22.08-15-gf270b3d5d Microphysics git describe: 22.08-3-gfe93b5a1 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.018010467 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.413987649 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.342991237 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342092577 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.343440298 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.350276619 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.33947697 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338958712 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.338300787 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.339193588 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339669491 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010279432 seconds Ending run at 05:39:27 UTC on 2022-08-19. Run time = 3.784812752 Run time without initialization = 3.506354138 Average number of zones advanced per microsecond: 0.748 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.782 ... 3.784 ... 3.785 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1543 2.4318 2.5334 66.94% Castro::do_advance_ctu() 10 0.04995 0.1536 0.4343 11.47% Gravity::make_radial_gravity() 21 0.3643 0.3783 0.4041 10.68% Castro::initData() 1 0.04703 0.101 0.1609 4.25% Castro::estTimeStep() 21 0.02306 0.08986 0.1438 3.80% FabArray::ParallelCopy_finish() 41 0.03731 0.06284 0.1284 3.39% FabArray::setVal() 143 0.04639 0.06414 0.06996 1.85% Castro::reset_internal_energy(Fab) 1008 0.04779 0.05066 0.05351 1.41% FabArray::ParallelCopy_nowait() 41 0.0283 0.04419 0.04922 1.30% StateData::FillBoundary(geom) 41 0.03825 0.04323 0.04615 1.22% Castro::normalize_species() 62 0.04101 0.04254 0.04523 1.20% FillPatchIterator::Initialize 41 0.02518 0.03669 0.04241 1.12% Gravity::interpolate_monopole_grav() 21 0.02692 0.02792 0.0293 0.77% Amr::InitAmr() 1 0.0002723 0.003752 0.0272 0.72% DistributionMapping::LeastUsedCPUs() 1 9.161e-06 0.02346 0.02696 0.71% Castro::construct_new_gravity_source() 10 0.01932 0.02237 0.02336 0.62% Castro::expand_state() 10 0.01012 0.01926 0.02302 0.61% Castro::initialize_do_advance() 10 0.01037 0.01769 0.02064 0.55% Castro::computeTemp() 63 0.01797 0.01932 0.02061 0.54% VisMF::Write(FabArray) 2 0.01249 0.01379 0.01811 0.48% MultiFab::Saxpy() 20 0.008681 0.0143 0.01637 0.43% Amr::writePlotFile() 2 0.01039 0.0146 0.01603 0.42% Gravity::get_new_grav_vector() 11 0.007839 0.01168 0.01302 0.34% FabArray::setDomainBndry() 41 0.005011 0.0102 0.01221 0.32% Gravity::get_old_grav_vector() 10 0.005717 0.009638 0.01177 0.31% Castro::construct_old_gravity_source() 10 0.004968 0.009907 0.01159 0.31% MultiFab::contains_nan() 20 0.009475 0.01072 0.01139 0.30% Castro::initialize_advance() 10 0.006567 0.009923 0.01092 0.29% Castro::initMFs() 1 0.006665 0.008555 0.009986 0.26% StateData::define() 4 0.005568 0.007066 0.008253 0.22% Castro::construct_new_source() 50 0.004898 0.006509 0.00713 0.19% main() 1 0.004205 0.006148 0.007036 0.19% Castro::swap_state_time_levels() 10 0.003351 0.004905 0.006727 0.18% Castro::enforce_min_density() 62 0.005327 0.006124 0.006564 0.17% Amr::coarseTimeStep() 10 0.0009372 0.001724 0.003688 0.10% Castro::buildMetrics() 1 0.001581 0.00202 0.002359 0.06% Castro::finalize_do_advance() 10 0.0006446 0.001396 0.001708 0.05% Amr::timeStep() 10 0.0002074 0.0002653 0.0004827 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0003 0.0003207 0.0003422 0.01% Castro::clean_state() 62 0.0001476 0.0001611 0.0001823 0.00% Castro::enforce_consistent_e() 1 7.785e-05 0.000115 0.0001607 0.00% StateDataPhysBCFunct::() 41 0.0001085 0.000133 0.0001443 0.00% FabArray::ParallelCopy() 41 7.799e-05 8.833e-05 9.697e-05 0.00% Amr::FinalizeInit() 1 4.56e-06 1.598e-05 9.102e-05 0.00% Castro::construct_old_source() 50 3.722e-05 7.191e-05 8.769e-05 0.00% Castro::do_old_sources() 10 4.368e-05 7.125e-05 8.708e-05 0.00% Castro::do_new_sources() 10 5.127e-05 7.312e-05 8.566e-05 0.00% Castro::Castro() 1 5.354e-05 6.737e-05 8.075e-05 0.00% FillPatchSingleLevel 41 6.017e-05 6.914e-05 7.516e-05 0.00% FabArrayBase::getCPC() 41 4.977e-05 5.794e-05 7.196e-05 0.00% Castro::subcycle_advance_ctu() 10 3.418e-05 5.19e-05 7.175e-05 0.00% Amr::writeSmallPlotFile() 1 2.455e-05 5.78e-05 7.135e-05 0.00% Castro::construct_old_gravity() 10 3.292e-05 5.23e-05 6.645e-05 0.00% Castro::advance() 10 3.172e-05 4.701e-05 6.527e-05 0.00% Castro::apply_source_to_state() 20 4.073e-05 5.147e-05 6.047e-05 0.00% Castro::finalize_advance() 10 5.031e-05 5.611e-05 5.934e-05 0.00% Castro::construct_new_gravity() 10 4.093e-05 4.667e-05 5.241e-05 0.00% Amr::defBaseLevel() 1 3.737e-05 3.919e-05 4.364e-05 0.00% FabArrayBase::CPC::define() 2 2.143e-05 2.736e-05 3.607e-05 0.00% Castro::enforce_speed_limit() 62 2.362e-05 2.911e-05 3.18e-05 0.00% Castro::check_for_nan() 20 2.355e-05 2.573e-05 2.921e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.535e-06 1.329e-05 2.211e-05 0.00% Amr::init() 1 1.901e-06 4.448e-06 1.897e-05 0.00% Castro::post_timestep() 10 1.469e-05 1.64e-05 1.894e-05 0.00% Gravity::set_mass_offset() 10 6.039e-06 1.012e-05 1.861e-05 0.00% Gravity::swapTimeLevels() 10 5.793e-06 1.303e-05 1.65e-05 0.00% Amr::initSubcycle() 1 8.361e-06 1.138e-05 1.434e-05 0.00% Castro::create_source_corrector() 10 6.352e-06 9.938e-06 1.207e-05 0.00% Castro::FluxRegCrseInit 10 4.989e-06 8.905e-06 1.153e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.995e-06 5.301e-06 1.105e-05 0.00% Castro::computeNewDt() 9 7.032e-06 9.101e-06 1.07e-05 0.00% Amr::InitializeInit() 1 2.489e-06 5.771e-06 8.397e-06 0.00% Castro::retry_advance_ctu() 10 3.896e-06 6.08e-06 7.996e-06 0.00% Amr::initialInit() 1 1.458e-06 2.467e-06 7.51e-06 0.00% Castro::post_init() 1 3.013e-06 4.361e-06 6.345e-06 0.00% Castro::computeInitialDt() 2 4e-06 4.328e-06 4.594e-06 0.00% Castro::post_regrid() 1 2.839e-06 3.336e-06 3.832e-06 0.00% Castro::FluxRegFineAdd() 10 1.819e-06 2.375e-06 3.09e-06 0.00% DistributionMapping::Distribute() 1 1.018e-06 1.33e-06 2.021e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.782 3.784 3.785 100.00% Amr::coarseTimeStep() 10 3.489 3.489 3.489 92.19% Amr::timeStep() 10 3.477 3.479 3.479 91.93% Castro::advance() 10 3.462 3.462 3.463 91.49% Castro::subcycle_advance_ctu() 10 3.386 3.394 3.409 90.08% Castro::do_advance_ctu() 10 3.386 3.394 3.409 90.08% Castro::construct_ctu_hydro_source() 10 2.154 2.432 2.533 66.94% Gravity::make_radial_gravity() 21 0.3643 0.3783 0.4041 10.68% Amr::init() 1 0.2511 0.2745 0.278 7.35% Amr::initialInit() 1 0.2329 0.2565 0.2602 6.87% Castro::construct_old_gravity() 10 0.2173 0.2273 0.2474 6.54% Gravity::get_old_grav_vector() 10 0.2164 0.2265 0.2468 6.52% Gravity::get_new_grav_vector() 11 0.2418 0.244 0.2458 6.49% FillPatchIterator::Initialize 41 0.1867 0.1975 0.2256 5.96% Amr::InitializeInit() 1 0.07057 0.1487 0.2157 5.70% Amr::defBaseLevel() 1 0.07056 0.1487 0.2157 5.70% Castro::construct_new_gravity() 10 0.2028 0.204 0.205 5.42% FillPatchSingleLevel 41 0.1328 0.1506 0.1954 5.16% Castro::initialize_do_advance() 10 0.1729 0.1775 0.1815 4.79% Castro::initData() 1 0.05101 0.1056 0.1661 4.39% Amr::FinalizeInit() 1 0.04372 0.1078 0.1647 4.35% FabArray::ParallelCopy() 41 0.08646 0.1072 0.1569 4.15% Castro::estTimeStep() 21 0.02306 0.08986 0.1438 3.80% Castro::expand_state() 10 0.1261 0.1293 0.1354 3.58% FabArray::ParallelCopy_finish() 41 0.03731 0.06284 0.1284 3.39% Castro::clean_state() 62 0.111 0.1179 0.1249 3.30% Castro::computeInitialDt() 2 0.002473 0.06623 0.1231 3.25% Castro::initialize_advance() 10 0.0522 0.06846 0.07582 2.00% Castro::computeTemp() 63 0.06609 0.0703 0.07446 1.97% FabArray::setVal() 143 0.04639 0.06414 0.06996 1.85% Castro::do_new_sources() 10 0.05025 0.06171 0.06476 1.71% Castro::reset_internal_energy(MultiFab) 63 0.04811 0.05098 0.05385 1.42% Castro::reset_internal_energy(Fab) 1008 0.04779 0.05066 0.05351 1.41% Castro::do_old_sources() 10 0.03285 0.0453 0.05071 1.34% FabArray::ParallelCopy_nowait() 41 0.02839 0.04428 0.04931 1.30% StateDataPhysBCFunct::() 41 0.03838 0.04337 0.04628 1.22% StateData::FillBoundary(geom) 41 0.03825 0.04323 0.04615 1.22% Castro::normalize_species() 62 0.04101 0.04254 0.04523 1.20% Castro::post_init() 1 0.03972 0.04074 0.04142 1.09% Castro::construct_new_source() 50 0.02422 0.02888 0.03038 0.80% Gravity::interpolate_monopole_grav() 21 0.02692 0.02792 0.0293 0.77% Amr::writePlotFile() 2 0.02798 0.02839 0.02879 0.76% Amr::InitAmr() 1 0.0002809 0.003764 0.02721 0.72% DistributionMapping::SFCProcessorMapDoIt() 1 1.434e-05 0.02346 0.02696 0.71% DistributionMapping::LeastUsedCPUs() 1 9.161e-06 0.02346 0.02696 0.71% Castro::construct_new_gravity_source() 10 0.01932 0.02237 0.02336 0.62% VisMF::Write(FabArray) 2 0.01249 0.01379 0.01811 0.48% Castro::post_timestep() 10 0.01483 0.01602 0.01656 0.44% Castro::apply_source_to_state() 20 0.008727 0.01435 0.01642 0.43% MultiFab::Saxpy() 20 0.008681 0.0143 0.01637 0.43% Castro::Castro() 1 0.009695 0.01246 0.01465 0.39% FabArray::setDomainBndry() 41 0.005011 0.0102 0.01221 0.32% Castro::construct_old_source() 50 0.005005 0.009979 0.01167 0.31% Castro::construct_old_gravity_source() 10 0.004968 0.009907 0.01159 0.31% Castro::check_for_nan() 20 0.009504 0.01074 0.01141 0.30% MultiFab::contains_nan() 20 0.009475 0.01072 0.01139 0.30% Castro::initMFs() 1 0.006665 0.008555 0.009986 0.26% AmrLevel::AmrLevel(dm) 1 0.005576 0.007079 0.00827 0.22% StateData::define() 4 0.005568 0.007066 0.008253 0.22% Castro::computeNewDt() 9 0.007336 0.007353 0.007372 0.19% Castro::swap_state_time_levels() 10 0.003351 0.004905 0.006727 0.18% Castro::enforce_min_density() 62 0.005327 0.006124 0.006564 0.17% Castro::post_regrid() 1 0.001537 0.002207 0.002896 0.08% Castro::buildMetrics() 1 0.001688 0.002189 0.002574 0.07% Castro::finalize_do_advance() 10 0.0006446 0.001396 0.001708 0.05% Castro::enforce_consistent_e() 1 7.785e-05 0.000115 0.0001607 0.00% FabArrayBase::getCPC() 41 7.262e-05 8.53e-05 9.338e-05 0.00% Castro::finalize_advance() 10 5.748e-05 6.739e-05 7.276e-05 0.00% Amr::writeSmallPlotFile() 1 2.455e-05 5.78e-05 7.135e-05 0.00% FabArrayBase::CPC::define() 2 2.143e-05 2.736e-05 3.607e-05 0.00% Castro::enforce_speed_limit() 62 2.362e-05 2.911e-05 3.18e-05 0.00% Gravity::set_mass_offset() 10 6.039e-06 1.012e-05 1.861e-05 0.00% Gravity::swapTimeLevels() 10 5.793e-06 1.303e-05 1.65e-05 0.00% Amr::initSubcycle() 1 8.361e-06 1.138e-05 1.434e-05 0.00% Castro::create_source_corrector() 10 6.352e-06 9.938e-06 1.207e-05 0.00% Castro::FluxRegCrseInit 10 4.989e-06 8.905e-06 1.153e-05 0.00% Castro::retry_advance_ctu() 10 3.896e-06 6.08e-06 7.996e-06 0.00% Castro::FluxRegFineAdd() 10 1.819e-06 2.375e-06 3.09e-06 0.00% DistributionMapping::Distribute() 1 1.018e-06 1.33e-06 2.021e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-15-gf270b3d5db8f) finalized