MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-16-g0911fc4b2e06) initialized Starting run at 05:39:42 UTC on 2022-08-22. Successfully read inputs file ... Castro git describe: 22.08-11-ga978fcf88 AMReX git describe: 22.08-16-g0911fc4b2 Microphysics git describe: 22.08-3-gfe93b5a1 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.018458201 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.361187013 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.341846533 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.341832177 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.34240733 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.350702811 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.346772388 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.33948685 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.340139374 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.342945193 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.344951679 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010531836 seconds Ending run at 05:39:46 UTC on 2022-08-22. Run time = 3.720980373 Run time without initialization = 3.470779153 Average number of zones advanced per microsecond: 0.755 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.721 ... 3.721 ... 3.721 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1594 2.4207 2.5203 67.73% Castro::do_advance_ctu() 10 0.03582 0.1352 0.3994 10.73% Gravity::make_radial_gravity() 21 0.3507 0.3666 0.3904 10.49% Castro::initData() 1 0.03934 0.1003 0.1601 4.30% Castro::estTimeStep() 21 0.02824 0.09402 0.1586 4.26% FabArray::ParallelCopy_finish() 41 0.04138 0.06486 0.1316 3.54% FabArray::setVal() 143 0.05212 0.06519 0.06912 1.86% Castro::reset_internal_energy(Fab) 1008 0.04855 0.05046 0.05364 1.44% FabArray::ParallelCopy_nowait() 41 0.02798 0.04431 0.0501 1.35% StateData::FillBoundary(geom) 41 0.03557 0.04294 0.0474 1.27% Castro::normalize_species() 62 0.04117 0.04209 0.04365 1.17% FillPatchIterator::Initialize 41 0.02449 0.03631 0.04125 1.11% Gravity::interpolate_monopole_grav() 21 0.02669 0.02774 0.02853 0.77% Castro::construct_new_gravity_source() 10 0.01962 0.02274 0.02356 0.63% Castro::expand_state() 10 0.009818 0.01823 0.0221 0.59% Castro::computeTemp() 63 0.01819 0.01902 0.02078 0.56% Castro::initialize_do_advance() 10 0.01021 0.01793 0.02074 0.56% VisMF::Write(FabArray) 2 0.01273 0.01436 0.02013 0.54% Amr::writePlotFile() 2 0.009083 0.01462 0.0165 0.44% MultiFab::Saxpy() 20 0.008709 0.01414 0.01622 0.44% MultiFab::contains_nan() 20 0.00978 0.01138 0.0126 0.34% Gravity::get_new_grav_vector() 11 0.007567 0.01125 0.01255 0.34% FabArray::setDomainBndry() 41 0.004733 0.01026 0.01241 0.33% Castro::construct_old_gravity_source() 10 0.004937 0.009973 0.01163 0.31% Gravity::get_old_grav_vector() 10 0.00561 0.00924 0.01074 0.29% Castro::initialize_advance() 10 0.00322 0.008783 0.01043 0.28% Castro::initMFs() 1 0.006666 0.008421 0.009911 0.27% StateData::define() 4 0.005491 0.006922 0.008183 0.22% main() 1 0.006745 0.006943 0.007271 0.20% Castro::enforce_min_density() 62 0.006079 0.006697 0.007129 0.19% Castro::construct_new_source() 50 0.004912 0.006461 0.007079 0.19% Castro::swap_state_time_levels() 10 0.003269 0.004902 0.006644 0.18% Castro::buildMetrics() 1 0.001577 0.001984 0.002354 0.06% Amr::coarseTimeStep() 10 0.001088 0.001556 0.002264 0.06% Castro::finalize_do_advance() 10 0.0007778 0.001626 0.00197 0.05% Amr::InitAmr() 1 0.0002852 0.0004045 0.0004992 0.01% Amr::timeStep() 10 0.0001768 0.000239 0.0004765 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000295 0.0003079 0.0003208 0.01% DistributionMapping::LeastUsedCPUs() 1 6.389e-06 0.0001231 0.0002646 0.01% Castro::clean_state() 62 0.0001296 0.000156 0.0001659 0.00% Castro::enforce_consistent_e() 1 7.635e-05 0.0001133 0.0001523 0.00% StateDataPhysBCFunct::() 41 0.0001 0.0001232 0.0001477 0.00% FabArray::ParallelCopy() 41 5.858e-05 8.246e-05 9.531e-05 0.00% Castro::construct_old_source() 50 3.232e-05 7.097e-05 8.997e-05 0.00% Castro::do_new_sources() 10 3.973e-05 6.969e-05 8.427e-05 0.00% Amr::FinalizeInit() 1 4.128e-06 1.528e-05 8.334e-05 0.00% Castro::Castro() 1 5.367e-05 6.781e-05 8.286e-05 0.00% Castro::construct_old_gravity() 10 4.658e-05 5.766e-05 8.214e-05 0.00% Castro::do_old_sources() 10 3.747e-05 6.531e-05 8.085e-05 0.00% FillPatchSingleLevel 41 5.724e-05 6.88e-05 7.789e-05 0.00% Amr::writeSmallPlotFile() 1 2.402e-05 5.729e-05 7.116e-05 0.00% FabArrayBase::getCPC() 41 5.364e-05 5.819e-05 6.75e-05 0.00% Amr::defBaseLevel() 1 4.12e-05 5.715e-05 6.663e-05 0.00% Castro::subcycle_advance_ctu() 10 3.195e-05 4.803e-05 6.288e-05 0.00% Castro::apply_source_to_state() 20 3.683e-05 4.925e-05 5.921e-05 0.00% Castro::advance() 10 2.943e-05 4.384e-05 5.685e-05 0.00% Castro::finalize_advance() 10 5.059e-05 5.242e-05 5.458e-05 0.00% Castro::construct_new_gravity() 10 3.406e-05 4.419e-05 5.109e-05 0.00% Castro::enforce_speed_limit() 62 2.604e-05 2.935e-05 3.908e-05 0.00% FabArrayBase::CPC::define() 2 2.381e-05 2.885e-05 3.359e-05 0.00% Castro::check_for_nan() 20 2.005e-05 2.421e-05 2.801e-05 0.00% Gravity::swapTimeLevels() 10 5.554e-06 1.318e-05 2.072e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.745e-06 1.174e-05 1.848e-05 0.00% Castro::post_timestep() 10 1.372e-05 1.623e-05 1.771e-05 0.00% Castro::create_source_corrector() 10 7.45e-06 1.145e-05 1.7e-05 0.00% Castro::post_init() 1 3.663e-06 6.837e-06 1.6e-05 0.00% Amr::initSubcycle() 1 8.175e-06 1.161e-05 1.453e-05 0.00% Gravity::set_mass_offset() 10 6.761e-06 9.053e-06 1.059e-05 0.00% Castro::computeNewDt() 9 7.248e-06 9.495e-06 1.049e-05 0.00% Castro::FluxRegCrseInit 10 6.057e-06 8.48e-06 1.015e-05 0.00% Castro::retry_advance_ctu() 10 4.657e-06 6.164e-06 7.476e-06 0.00% Amr::InitializeInit() 1 2.16e-06 3.815e-06 7.249e-06 0.00% Castro::post_regrid() 1 2.014e-06 3.296e-06 6.782e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.749e-06 4.803e-06 6.411e-06 0.00% Castro::computeInitialDt() 2 3.455e-06 4.857e-06 6.243e-06 0.00% Castro::FluxRegFineAdd() 10 2.07e-06 2.481e-06 3.009e-06 0.00% Amr::init() 1 1.94e-06 2.301e-06 3.008e-06 0.00% Amr::initialInit() 1 1.26e-06 1.809e-06 2.56e-06 0.00% DistributionMapping::Distribute() 1 9.32e-07 1.231e-06 1.427e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.721 3.721 3.721 100.00% Amr::coarseTimeStep() 10 3.453 3.453 3.453 92.80% Amr::timeStep() 10 3.442 3.443 3.444 92.54% Castro::advance() 10 3.426 3.427 3.427 92.11% Castro::subcycle_advance_ctu() 10 3.352 3.359 3.373 90.66% Castro::do_advance_ctu() 10 3.352 3.359 3.373 90.65% Castro::construct_ctu_hydro_source() 10 2.159 2.421 2.52 67.73% Gravity::make_radial_gravity() 21 0.3507 0.3666 0.3904 10.49% Amr::init() 1 0.2495 0.2496 0.2498 6.71% Gravity::get_new_grav_vector() 11 0.2411 0.2447 0.2477 6.66% Castro::construct_old_gravity() 10 0.2015 0.2142 0.2323 6.24% Amr::initialInit() 1 0.2308 0.2313 0.2319 6.23% Gravity::get_old_grav_vector() 10 0.2006 0.2135 0.2317 6.23% FillPatchIterator::Initialize 41 0.1903 0.199 0.2265 6.09% Castro::construct_new_gravity() 10 0.2028 0.2055 0.2081 5.59% FillPatchSingleLevel 41 0.137 0.1525 0.1972 5.30% Amr::InitializeInit() 1 0.05884 0.1245 0.1881 5.06% Amr::defBaseLevel() 1 0.05884 0.1245 0.1881 5.06% Castro::initialize_do_advance() 10 0.1696 0.1799 0.1837 4.94% Amr::FinalizeInit() 1 0.0435 0.1068 0.1723 4.63% Castro::initData() 1 0.043 0.105 0.1653 4.44% FabArray::ParallelCopy() 41 0.09165 0.1093 0.1598 4.29% Castro::estTimeStep() 21 0.02824 0.09402 0.1586 4.26% Castro::expand_state() 10 0.1249 0.1317 0.1393 3.74% Castro::computeInitialDt() 2 0.002495 0.06624 0.132 3.55% FabArray::ParallelCopy_finish() 41 0.04138 0.06486 0.1316 3.54% Castro::clean_state() 62 0.1139 0.1175 0.123 3.31% Castro::initialize_advance() 10 0.05275 0.06799 0.07482 2.01% Castro::computeTemp() 63 0.0672 0.06979 0.07473 2.01% FabArray::setVal() 143 0.05212 0.06519 0.06912 1.86% Castro::do_new_sources() 10 0.05371 0.06272 0.06448 1.73% Castro::reset_internal_energy(MultiFab) 63 0.04884 0.05077 0.05395 1.45% Castro::reset_internal_energy(Fab) 1008 0.04855 0.05046 0.05364 1.44% FabArray::ParallelCopy_nowait() 41 0.02806 0.0444 0.05018 1.35% Castro::do_old_sources() 10 0.03306 0.04481 0.04873 1.31% StateDataPhysBCFunct::() 41 0.03567 0.04307 0.04754 1.28% StateData::FillBoundary(geom) 41 0.03557 0.04294 0.0474 1.27% Castro::normalize_species() 62 0.04117 0.04209 0.04365 1.17% Castro::post_init() 1 0.03939 0.03991 0.04037 1.08% Castro::construct_new_source() 50 0.02454 0.0292 0.03046 0.82% Amr::writePlotFile() 2 0.0283 0.02898 0.02941 0.79% Gravity::interpolate_monopole_grav() 21 0.02669 0.02774 0.02853 0.77% Castro::construct_new_gravity_source() 10 0.01962 0.02274 0.02356 0.63% VisMF::Write(FabArray) 2 0.01273 0.01436 0.02013 0.54% Castro::apply_source_to_state() 20 0.008751 0.01419 0.01628 0.44% MultiFab::Saxpy() 20 0.008709 0.01414 0.01622 0.44% Castro::post_timestep() 10 0.01547 0.01582 0.01621 0.44% Castro::Castro() 1 0.01001 0.01238 0.01457 0.39% Castro::check_for_nan() 20 0.0098 0.0114 0.01263 0.34% MultiFab::contains_nan() 20 0.00978 0.01138 0.0126 0.34% FabArray::setDomainBndry() 41 0.004733 0.01026 0.01241 0.33% Castro::construct_old_source() 50 0.004969 0.01004 0.01172 0.31% Castro::construct_old_gravity_source() 10 0.004937 0.009973 0.01163 0.31% Castro::initMFs() 1 0.006666 0.008421 0.009911 0.27% AmrLevel::AmrLevel(dm) 1 0.005498 0.006933 0.008199 0.22% StateData::define() 4 0.005491 0.006922 0.008183 0.22% Castro::enforce_min_density() 62 0.006079 0.006697 0.007129 0.19% Castro::computeNewDt() 9 0.007022 0.007034 0.007051 0.19% Castro::swap_state_time_levels() 10 0.003269 0.004902 0.006644 0.18% Castro::post_regrid() 1 0.001538 0.001978 0.002867 0.08% Castro::buildMetrics() 1 0.001689 0.002153 0.002577 0.07% Castro::finalize_do_advance() 10 0.0007778 0.001626 0.00197 0.05% Amr::InitAmr() 1 0.0002952 0.0004161 0.0005127 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.225e-05 0.0001291 0.0002723 0.01% DistributionMapping::LeastUsedCPUs() 1 6.389e-06 0.0001231 0.0002646 0.01% Castro::enforce_consistent_e() 1 7.635e-05 0.0001133 0.0001523 0.00% FabArrayBase::getCPC() 41 7.879e-05 8.704e-05 0.0001 0.00% Amr::writeSmallPlotFile() 1 2.402e-05 5.729e-05 7.116e-05 0.00% Castro::finalize_advance() 10 5.909e-05 6.338e-05 6.676e-05 0.00% Castro::enforce_speed_limit() 62 2.604e-05 2.935e-05 3.908e-05 0.00% FabArrayBase::CPC::define() 2 2.381e-05 2.885e-05 3.359e-05 0.00% Gravity::swapTimeLevels() 10 5.554e-06 1.318e-05 2.072e-05 0.00% Castro::create_source_corrector() 10 7.45e-06 1.145e-05 1.7e-05 0.00% Amr::initSubcycle() 1 8.175e-06 1.161e-05 1.453e-05 0.00% Gravity::set_mass_offset() 10 6.761e-06 9.053e-06 1.059e-05 0.00% Castro::FluxRegCrseInit 10 6.057e-06 8.48e-06 1.015e-05 0.00% Castro::retry_advance_ctu() 10 4.657e-06 6.164e-06 7.476e-06 0.00% Castro::FluxRegFineAdd() 10 2.07e-06 2.481e-06 3.009e-06 0.00% DistributionMapping::Distribute() 1 9.32e-07 1.231e-06 1.427e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-16-g0911fc4b2e06) finalized