MPI initialized with 4 MPI processes
MPI initialized with thread support level 3
AMReX (22.08-17-g8294c3afbcbb) initialized
Starting run at 06:56:32 UTC on 2022-08-23.
Successfully read inputs file ...
Castro git describe: 22.08-11-ga978fcf88
AMReX git describe: 22.08-17-g8294c3afb
Microphysics git describe: 22.08-4-gb9a0f9aa
reading extern runtime parameters ...
2 Species:
A B
Successfully read inputs file ...
Initializing the data at level 0
Done initializing the level 0 data
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
TIME= 0 MASS = 1
TIME= 0 XMOM = 1
TIME= 0 YMOM = 1
TIME= 0 ZMOM = 1
TIME= 0 ANG MOM X = 0
TIME= 0 ANG MOM Y = 0
TIME= 0 ANG MOM Z = 0
TIME= 0 RHO*e = 2.5
TIME= 0 RHO*K = 1.5
TIME= 0 RHO*E = 4
TIME= 0 CENTER OF MASS X-LOC = 0.5
TIME= 0 CENTER OF MASS X-VEL = 1
TIME= 0 CENTER OF MASS Y-LOC = 0.5
TIME= 0 CENTER OF MASS Y-VEL = 1
TIME= 0 CENTER OF MASS Z-LOC = 0.5
TIME= 0 CENTER OF MASS Z-VEL = 1
TIME= 0 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0 MAXIMUM DENSITY = 1
INITIAL GRIDS
Level 0 4 grids 262144 cells 100 % of domain
smallest grid: 64 x 32 x 32 biggest grid: 64 x 32 x 32
PLOTFILE: file = species-mhd_plt00000
Write plotfile time = 0.015217498 seconds
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[Level 0 step 1] ADVANCE with dt = 0.0006441185975
[1m[32m Beginning subcycle 1 starting at time 0 with dt = 0.0006441185975[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.009992822
... mhd ...!!!
Castro::do_new_sources() time = 0.017099923
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1283365569
[Level 0 step 1] Advanced 262144 cells
TIME= 0.0006441185975 MASS = 1
TIME= 0.0006441185975 XMOM = 1
TIME= 0.0006441185975 YMOM = 1
TIME= 0.0006441185975 ZMOM = 1
TIME= 0.0006441185975 ANG MOM X = 0
TIME= 0.0006441185975 ANG MOM Y = 0
TIME= 0.0006441185975 ANG MOM Z = 0
TIME= 0.0006441185975 RHO*e = 2.5
TIME= 0.0006441185975 RHO*K = 1.5
TIME= 0.0006441185975 RHO*E = 4
TIME= 0.0006441185975 CENTER OF MASS X-LOC = 0.5
TIME= 0.0006441185975 CENTER OF MASS X-VEL = 1
TIME= 0.0006441185975 CENTER OF MASS Y-LOC = 0.5
TIME= 0.0006441185975 CENTER OF MASS Y-VEL = 1
TIME= 0.0006441185975 CENTER OF MASS Z-LOC = 0.5
TIME= 0.0006441185975 CENTER OF MASS Z-VEL = 1
TIME= 0.0006441185975 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.0006441185975 MAXIMUM DENSITY = 1
[STEP 1] Coarse TimeStep time: 2.05637932
[STEP 1] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 1 TIME = 0.0006441185975 DT = 0.0006441185975
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0006763245274 = 1.05 * 0.0006441185975
[Level 0 step 2] ADVANCE with dt = 0.0006763245274
[1m[32m Beginning subcycle 1 starting at time 0.0006441185975 with dt = 0.0006763245274[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.009524143
... mhd ...!!!
Castro::do_new_sources() time = 0.017000955
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1302870787
[Level 0 step 2] Advanced 262144 cells
TIME= 0.001320443125 MASS = 1
TIME= 0.001320443125 XMOM = 1
TIME= 0.001320443125 YMOM = 1
TIME= 0.001320443125 ZMOM = 1
TIME= 0.001320443125 ANG MOM X = 0
TIME= 0.001320443125 ANG MOM Y = 0
TIME= 0.001320443125 ANG MOM Z = 0
TIME= 0.001320443125 RHO*e = 2.5
TIME= 0.001320443125 RHO*K = 1.5
TIME= 0.001320443125 RHO*E = 4
TIME= 0.001320443125 CENTER OF MASS X-LOC = 0.5
TIME= 0.001320443125 CENTER OF MASS X-VEL = 1
TIME= 0.001320443125 CENTER OF MASS Y-LOC = 0.5
TIME= 0.001320443125 CENTER OF MASS Y-VEL = 1
TIME= 0.001320443125 CENTER OF MASS Z-LOC = 0.5
TIME= 0.001320443125 CENTER OF MASS Z-VEL = 1
TIME= 0.001320443125 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.001320443125 MAXIMUM DENSITY = 1
[STEP 2] Coarse TimeStep time: 2.025204377
[STEP 2] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 2 TIME = 0.001320443125 DT = 0.0006763245274
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0007101407537 = 1.05 * 0.0006763245274
[Level 0 step 3] ADVANCE with dt = 0.0007101407537
[1m[32m Beginning subcycle 1 starting at time 0.001320443125 with dt = 0.0007101407537[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.009638287
... mhd ...!!!
Castro::do_new_sources() time = 0.020939828
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1290686585
[Level 0 step 3] Advanced 262144 cells
TIME= 0.002030583879 MASS = 1
TIME= 0.002030583879 XMOM = 1
TIME= 0.002030583879 YMOM = 1
TIME= 0.002030583879 ZMOM = 1
TIME= 0.002030583879 ANG MOM X = 0
TIME= 0.002030583879 ANG MOM Y = 0
TIME= 0.002030583879 ANG MOM Z = 0
TIME= 0.002030583879 RHO*e = 2.5
TIME= 0.002030583879 RHO*K = 1.5
TIME= 0.002030583879 RHO*E = 4
TIME= 0.002030583879 CENTER OF MASS X-LOC = 0.5
TIME= 0.002030583879 CENTER OF MASS X-VEL = 1
TIME= 0.002030583879 CENTER OF MASS Y-LOC = 0.5
TIME= 0.002030583879 CENTER OF MASS Y-VEL = 1
TIME= 0.002030583879 CENTER OF MASS Z-LOC = 0.5
TIME= 0.002030583879 CENTER OF MASS Z-VEL = 1
TIME= 0.002030583879 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.002030583879 MAXIMUM DENSITY = 1
[STEP 3] Coarse TimeStep time: 2.04433723
[STEP 3] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 3 TIME = 0.002030583879 DT = 0.0007101407537
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0007456477914 = 1.05 * 0.0007101407537
[Level 0 step 4] ADVANCE with dt = 0.0007456477914
[1m[32m Beginning subcycle 1 starting at time 0.002030583879 with dt = 0.0007456477914[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.008727695
... mhd ...!!!
Castro::do_new_sources() time = 0.020204081
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1325014138
[Level 0 step 4] Advanced 262144 cells
TIME= 0.00277623167 MASS = 1
TIME= 0.00277623167 XMOM = 1
TIME= 0.00277623167 YMOM = 1
TIME= 0.00277623167 ZMOM = 1
TIME= 0.00277623167 ANG MOM X = 0
TIME= 0.00277623167 ANG MOM Y = 0
TIME= 0.00277623167 ANG MOM Z = 0
TIME= 0.00277623167 RHO*e = 2.5
TIME= 0.00277623167 RHO*K = 1.5
TIME= 0.00277623167 RHO*E = 4
TIME= 0.00277623167 CENTER OF MASS X-LOC = 0.5
TIME= 0.00277623167 CENTER OF MASS X-VEL = 1
TIME= 0.00277623167 CENTER OF MASS Y-LOC = 0.5
TIME= 0.00277623167 CENTER OF MASS Y-VEL = 1
TIME= 0.00277623167 CENTER OF MASS Z-LOC = 0.5
TIME= 0.00277623167 CENTER OF MASS Z-VEL = 1
TIME= 0.00277623167 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.00277623167 MAXIMUM DENSITY = 1
[STEP 4] Coarse TimeStep time: 1.99183948
[STEP 4] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 4 TIME = 0.00277623167 DT = 0.0007456477914
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.000782930181 = 1.05 * 0.0007456477914
[Level 0 step 5] ADVANCE with dt = 0.000782930181
[1m[32m Beginning subcycle 1 starting at time 0.00277623167 with dt = 0.000782930181[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.009126901
... mhd ...!!!
Castro::do_new_sources() time = 0.028832682
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1319122052
[Level 0 step 5] Advanced 262144 cells
TIME= 0.003559161851 MASS = 1
TIME= 0.003559161851 XMOM = 1
TIME= 0.003559161851 YMOM = 1
TIME= 0.003559161851 ZMOM = 1
TIME= 0.003559161851 ANG MOM X = 0
TIME= 0.003559161851 ANG MOM Y = 0
TIME= 0.003559161851 ANG MOM Z = 0
TIME= 0.003559161851 RHO*e = 2.5
TIME= 0.003559161851 RHO*K = 1.5
TIME= 0.003559161851 RHO*E = 4
TIME= 0.003559161851 CENTER OF MASS X-LOC = 0.5
TIME= 0.003559161851 CENTER OF MASS X-VEL = 1
TIME= 0.003559161851 CENTER OF MASS Y-LOC = 0.5
TIME= 0.003559161851 CENTER OF MASS Y-VEL = 1
TIME= 0.003559161851 CENTER OF MASS Z-LOC = 0.5
TIME= 0.003559161851 CENTER OF MASS Z-VEL = 1
TIME= 0.003559161851 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.003559161851 MAXIMUM DENSITY = 1
[STEP 5] Coarse TimeStep time: 2.001868876
[STEP 5] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 5 TIME = 0.003559161851 DT = 0.000782930181
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.00082207669 = 1.05 * 0.000782930181
[Level 0 step 6] ADVANCE with dt = 0.00082207669
[1m[32m Beginning subcycle 1 starting at time 0.003559161851 with dt = 0.00082207669[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.008334293
... mhd ...!!!
Castro::do_new_sources() time = 0.021811576
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1310384586
[Level 0 step 6] Advanced 262144 cells
TIME= 0.004381238541 MASS = 1
TIME= 0.004381238541 XMOM = 1
TIME= 0.004381238541 YMOM = 1
TIME= 0.004381238541 ZMOM = 1
TIME= 0.004381238541 ANG MOM X = 0
TIME= 0.004381238541 ANG MOM Y = 0
TIME= 0.004381238541 ANG MOM Z = 0
TIME= 0.004381238541 RHO*e = 2.5
TIME= 0.004381238541 RHO*K = 1.5
TIME= 0.004381238541 RHO*E = 4
TIME= 0.004381238541 CENTER OF MASS X-LOC = 0.5
TIME= 0.004381238541 CENTER OF MASS X-VEL = 1
TIME= 0.004381238541 CENTER OF MASS Y-LOC = 0.5
TIME= 0.004381238541 CENTER OF MASS Y-VEL = 1
TIME= 0.004381238541 CENTER OF MASS Z-LOC = 0.5
TIME= 0.004381238541 CENTER OF MASS Z-VEL = 1
TIME= 0.004381238541 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.004381238541 MAXIMUM DENSITY = 1
[STEP 6] Coarse TimeStep time: 2.012410989
[STEP 6] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 6 TIME = 0.004381238541 DT = 0.00082207669
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0008631805245 = 1.05 * 0.00082207669
[Level 0 step 7] ADVANCE with dt = 0.0008631805245
[1m[32m Beginning subcycle 1 starting at time 0.004381238541 with dt = 0.0008631805245[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.008379363
... mhd ...!!!
Castro::do_new_sources() time = 0.014932583
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1336931664
[Level 0 step 7] Advanced 262144 cells
TIME= 0.005244419066 MASS = 1
TIME= 0.005244419066 XMOM = 1
TIME= 0.005244419066 YMOM = 1
TIME= 0.005244419066 ZMOM = 1
TIME= 0.005244419066 ANG MOM X = 0
TIME= 0.005244419066 ANG MOM Y = 0
TIME= 0.005244419066 ANG MOM Z = 0
TIME= 0.005244419066 RHO*e = 2.5
TIME= 0.005244419066 RHO*K = 1.5
TIME= 0.005244419066 RHO*E = 4
TIME= 0.005244419066 CENTER OF MASS X-LOC = 0.5
TIME= 0.005244419066 CENTER OF MASS X-VEL = 1
TIME= 0.005244419066 CENTER OF MASS Y-LOC = 0.5
TIME= 0.005244419066 CENTER OF MASS Y-VEL = 1
TIME= 0.005244419066 CENTER OF MASS Z-LOC = 0.5
TIME= 0.005244419066 CENTER OF MASS Z-VEL = 1
TIME= 0.005244419066 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.005244419066 MAXIMUM DENSITY = 1
[STEP 7] Coarse TimeStep time: 1.972632173
[STEP 7] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 7 TIME = 0.005244419066 DT = 0.0008631805245
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0009063395508 = 1.05 * 0.0008631805245
[Level 0 step 8] ADVANCE with dt = 0.0009063395508
[1m[32m Beginning subcycle 1 starting at time 0.005244419066 with dt = 0.0009063395508[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.008238727
... mhd ...!!!
Castro::do_new_sources() time = 0.014871228
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1330253739
[Level 0 step 8] Advanced 262144 cells
TIME= 0.006150758616 MASS = 1
TIME= 0.006150758616 XMOM = 1
TIME= 0.006150758616 YMOM = 1
TIME= 0.006150758616 ZMOM = 1
TIME= 0.006150758616 ANG MOM X = 0
TIME= 0.006150758616 ANG MOM Y = 0
TIME= 0.006150758616 ANG MOM Z = 0
TIME= 0.006150758616 RHO*e = 2.5
TIME= 0.006150758616 RHO*K = 1.5
TIME= 0.006150758616 RHO*E = 4
TIME= 0.006150758616 CENTER OF MASS X-LOC = 0.5
TIME= 0.006150758616 CENTER OF MASS X-VEL = 1
TIME= 0.006150758616 CENTER OF MASS Y-LOC = 0.5
TIME= 0.006150758616 CENTER OF MASS Y-VEL = 1
TIME= 0.006150758616 CENTER OF MASS Z-LOC = 0.5
TIME= 0.006150758616 CENTER OF MASS Z-VEL = 1
TIME= 0.006150758616 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.006150758616 MAXIMUM DENSITY = 1
[STEP 8] Coarse TimeStep time: 1.982435054
[STEP 8] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 8 TIME = 0.006150758616 DT = 0.0009063395508
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0009516565283 = 1.05 * 0.0009063395508
[Level 0 step 9] ADVANCE with dt = 0.0009516565283
[1m[32m Beginning subcycle 1 starting at time 0.006150758616 with dt = 0.0009516565283[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.008392146
... mhd ...!!!
Castro::do_new_sources() time = 0.014895302
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1333773631
[Level 0 step 9] Advanced 262144 cells
TIME= 0.007102415145 MASS = 1
TIME= 0.007102415145 XMOM = 1
TIME= 0.007102415145 YMOM = 1
TIME= 0.007102415145 ZMOM = 1
TIME= 0.007102415145 ANG MOM X = 0
TIME= 0.007102415145 ANG MOM Y = 0
TIME= 0.007102415145 ANG MOM Z = 0
TIME= 0.007102415145 RHO*e = 2.5
TIME= 0.007102415145 RHO*K = 1.5
TIME= 0.007102415145 RHO*E = 4
TIME= 0.007102415145 CENTER OF MASS X-LOC = 0.5
TIME= 0.007102415145 CENTER OF MASS X-VEL = 1
TIME= 0.007102415145 CENTER OF MASS Y-LOC = 0.5
TIME= 0.007102415145 CENTER OF MASS Y-VEL = 1
TIME= 0.007102415145 CENTER OF MASS Z-LOC = 0.5
TIME= 0.007102415145 CENTER OF MASS Z-VEL = 1
TIME= 0.007102415145 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.007102415145 MAXIMUM DENSITY = 1
[STEP 9] Coarse TimeStep time: 1.977328834
[STEP 9] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 9 TIME = 0.007102415145 DT = 0.0009516565283
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0009992393547 = 1.05 * 0.0009516565283
[Level 0 step 10] ADVANCE with dt = 0.0009992393547
[1m[32m Beginning subcycle 1 starting at time 0.007102415145 with dt = 0.0009992393547[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.008311644
... mhd ...!!!
Castro::do_new_sources() time = 0.01489439
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1332647764
[Level 0 step 10] Advanced 262144 cells
TIME= 0.008101654499 MASS = 1
TIME= 0.008101654499 XMOM = 1
TIME= 0.008101654499 YMOM = 1
TIME= 0.008101654499 ZMOM = 1
TIME= 0.008101654499 ANG MOM X = 0
TIME= 0.008101654499 ANG MOM Y = 0
TIME= 0.008101654499 ANG MOM Z = 0
TIME= 0.008101654499 RHO*e = 2.5
TIME= 0.008101654499 RHO*K = 1.5
TIME= 0.008101654499 RHO*E = 4
TIME= 0.008101654499 CENTER OF MASS X-LOC = 0.5
TIME= 0.008101654499 CENTER OF MASS X-VEL = 1
TIME= 0.008101654499 CENTER OF MASS Y-LOC = 0.5
TIME= 0.008101654499 CENTER OF MASS Y-VEL = 1
TIME= 0.008101654499 CENTER OF MASS Z-LOC = 0.5
TIME= 0.008101654499 CENTER OF MASS Z-VEL = 1
TIME= 0.008101654499 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.008101654499 MAXIMUM DENSITY = 1
[STEP 10] Coarse TimeStep time: 1.978967621
[STEP 10] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 10 TIME = 0.008101654499 DT = 0.0009992393547
PLOTFILE: file = species-mhd_plt00010
Write plotfile time = 0.069412221 seconds
Ending run at 06:56:52 UTC on 2022-08-23.
Run time = 20.19666971
Run time without initialization = 20.122951
Average number of zones advanced per microsecond: 0.130
Average number of zones advanced per microsecond per rank: 0.033
TinyProfiler total time across processes [min...avg...max]: 20.19 ... 20.2 ... 20.2
-------------------------------------------------------------------------------------------
Name NCalls Excl. Min Excl. Avg Excl. Max Max %
-------------------------------------------------------------------------------------------
Castro::do_advance_ctu() 10 18.8662 18.8703 18.8770 93.47%
FabArray::ParallelCopy_finish() 148 0.2022 0.2161 0.2286 1.13%
FabArray::ParallelCopy_nowait() 148 0.115 0.1271 0.1337 0.66%
Castro::reset_internal_energy(Fab) 1008 0.1204 0.1217 0.1223 0.61%
FillPatchIterator::Initialize 148 0.1113 0.1162 0.1181 0.58%
FabArray::setVal() 137 0.1002 0.1051 0.1162 0.58%
Castro::initialize_do_advance() 10 0.07394 0.0741 0.07423 0.37%
Amr::writePlotFile() 2 0.06753 0.07055 0.07159 0.35%
Castro::estTimeStep() 21 0.05696 0.06055 0.06734 0.33%
Castro::normalize_species() 62 0.06087 0.0611 0.0613 0.30%
MultiFab::Saxpy() 50 0.04141 0.04751 0.04959 0.25%
Castro::finalize_do_advance() 10 0.03639 0.04118 0.04299 0.21%
Castro::construct_new_source() 40 0.02936 0.03236 0.03406 0.17%
Castro::derive() 44 0.02777 0.02879 0.02953 0.15%
Castro::expand_state() 10 0.02517 0.02766 0.02903 0.14%
Castro::computeTemp() 63 0.02653 0.02753 0.02796 0.14%
Castro::sum_integrated_quantities() 11 0.01056 0.01396 0.02305 0.11%
Castro::construct_old_source() 40 0.01809 0.01926 0.02006 0.10%
Castro::initialize_advance() 10 0.019 0.01929 0.01999 0.10%
VisMF::Write(FabArray) 2 0.01337 0.01439 0.01733 0.09%
Castro::do_old_sources() 10 0.000153 0.005047 0.0166 0.08%
Castro::volWgtSum() 132 0.01411 0.01464 0.0149 0.07%
MultiFab::contains_nan() 20 0.01239 0.01357 0.01417 0.07%
Castro::initMFs() 1 0.01204 0.01206 0.01209 0.06%
StateData::define() 5 0.01102 0.01114 0.01143 0.06%
Castro::enforce_min_density() 62 0.01026 0.01039 0.01064 0.05%
main() 1 0.007585 0.008655 0.009488 0.05%
Castro::swap_state_time_levels() 10 0.008317 0.008582 0.009368 0.05%
Castro::do_new_sources() 10 0.0001631 0.001477 0.00516 0.03%
Castro::buildMetrics() 1 0.003539 0.003546 0.003549 0.02%
Castro::locWgtSum() 33 0.003328 0.003402 0.003441 0.02%
Castro::initData() 1 0.002922 0.002959 0.002987 0.01%
Castro::finalize_advance() 10 0.00129 0.001516 0.001649 0.01%
Amr::coarseTimeStep() 10 0.0006692 0.0008317 0.0008894 0.00%
Castro::subcycle_advance_ctu() 10 4.64e-05 0.0002409 0.0008067 0.00%
Castro::reset_internal_energy(MultiFab) 63 0.0004868 0.0004948 0.0005034 0.00%
Castro::enforce_consistent_e() 1 0.0004209 0.0004509 0.0004986 0.00%
Amr::InitAmr() 1 0.0002811 0.0003278 0.0004564 0.00%
Castro::computeNewDt() 9 1.42e-05 7.79e-05 0.0002617 0.00%
Castro::clean_state() 62 0.0001801 0.0002116 0.0002528 0.00%
DistributionMapping::LeastUsedCPUs() 1 7.77e-06 0.0001643 0.0002176 0.00%
StateDataPhysBCFunct::() 148 0.0001695 0.0001802 0.0001881 0.00%
FabArray::ParallelCopy() 148 0.0001529 0.0001628 0.0001725 0.00%
FabArrayBase::getCPC() 148 0.0001579 0.0001645 0.0001721 0.00%
FabArrayBase::CPC::define() 6 0.0001247 0.0001405 0.0001575 0.00%
FabArray::setDomainBndry() 148 0.0001224 0.0001357 0.0001436 0.00%
FillPatchSingleLevel 148 0.0001169 0.0001279 0.0001335 0.00%
Amr::timeStep() 10 5.74e-05 6.741e-05 9.279e-05 0.00%
Amr::writeSmallPlotFile() 1 3.387e-05 4.806e-05 7.81e-05 0.00%
Amr::FinalizeInit() 1 6.571e-06 1.989e-05 5.095e-05 0.00%
Castro::advance() 10 3.326e-05 3.611e-05 3.831e-05 0.00%
Castro::FluxRegCrseInit 10 1.159e-05 2.62e-05 3.821e-05 0.00%
Castro::enforce_speed_limit() 62 3.363e-05 3.608e-05 3.728e-05 0.00%
Castro::apply_source_to_state() 20 2.835e-05 3.249e-05 3.615e-05 0.00%
Amr::defBaseLevel() 1 1.98e-05 2.452e-05 3.392e-05 0.00%
Castro::check_for_nan() 20 2.497e-05 2.682e-05 2.9e-05 0.00%
Castro::post_timestep() 10 2.071e-05 2.321e-05 2.58e-05 0.00%
Castro::Castro() 1 1.682e-05 1.817e-05 2.018e-05 0.00%
Castro::post_init() 1 8.215e-06 1.136e-05 1.931e-05 0.00%
AmrLevel::AmrLevel(dm) 1 1.632e-05 1.678e-05 1.705e-05 0.00%
Amr::InitializeInit() 1 6.693e-06 8.584e-06 1.229e-05 0.00%
Castro::create_source_corrector() 10 9.063e-06 1.016e-05 1.114e-05 0.00%
Castro::retry_advance_ctu() 10 7.326e-06 9.21e-06 1.106e-05 0.00%
Amr::initSubcycle() 1 8.115e-06 8.636e-06 9.348e-06 0.00%
DistributionMapping::SFCProcessorMapDoIt() 1 3.68e-06 5.313e-06 5.956e-06 0.00%
Castro::computeInitialDt() 2 3.652e-06 4.54e-06 5.525e-06 0.00%
Castro::FluxRegFineAdd() 10 3.071e-06 3.489e-06 3.932e-06 0.00%
Castro::post_regrid() 1 2.504e-06 2.764e-06 3.541e-06 0.00%
Amr::init() 1 2.381e-06 2.766e-06 3.211e-06 0.00%
Amr::initialInit() 1 1.62e-06 1.865e-06 2.021e-06 0.00%
DistributionMapping::Distribute() 1 7.71e-07 8.112e-07 8.38e-07 0.00%
-------------------------------------------------------------------------------------------
-------------------------------------------------------------------------------------------
Name NCalls Incl. Min Incl. Avg Incl. Max Max %
-------------------------------------------------------------------------------------------
main() 1 20.19 20.2 20.2 100.00%
Amr::coarseTimeStep() 10 20.11 20.11 20.11 99.59%
Amr::timeStep() 10 20.02 20.02 20.02 99.10%
Castro::advance() 10 19.91 19.91 19.92 98.61%
Castro::subcycle_advance_ctu() 10 19.8 19.81 19.81 98.08%
Castro::do_advance_ctu() 10 19.8 19.81 19.81 98.08%
Castro::initialize_do_advance() 10 0.4475 0.4611 0.4701 2.33%
FillPatchIterator::Initialize 148 0.4506 0.4603 0.4675 2.31%
FillPatchSingleLevel 148 0.3323 0.344 0.3503 1.73%
FabArray::ParallelCopy() 148 0.332 0.3437 0.35 1.73%
Castro::expand_state() 10 0.2567 0.2625 0.2676 1.32%
FabArray::ParallelCopy_finish() 148 0.2022 0.2161 0.2286 1.13%
Castro::clean_state() 62 0.217 0.2195 0.2206 1.09%
Castro::do_new_sources() 10 0.1695 0.1797 0.1839 0.91%
Castro::computeTemp() 63 0.1474 0.1497 0.1507 0.75%
FabArray::ParallelCopy_nowait() 148 0.1153 0.1274 0.134 0.66%
Castro::construct_new_source() 40 0.1018 0.1161 0.1237 0.61%
Castro::reset_internal_energy(MultiFab) 63 0.1209 0.1222 0.1228 0.61%
Castro::reset_internal_energy(Fab) 1008 0.1204 0.1217 0.1223 0.61%
FabArray::setVal() 137 0.1002 0.1051 0.1162 0.58%
Castro::initialize_advance() 10 0.1053 0.1075 0.1123 0.56%
Castro::post_timestep() 10 0.09917 0.1011 0.1059 0.52%
Castro::do_old_sources() 10 0.08099 0.09051 0.1034 0.51%
Castro::sum_integrated_quantities() 11 0.07893 0.08146 0.08782 0.43%
Amr::writePlotFile() 2 0.08486 0.08493 0.08496 0.42%
Amr::init() 1 0.07314 0.07329 0.07335 0.36%
Castro::estTimeStep() 21 0.05696 0.06055 0.06734 0.33%
Castro::normalize_species() 62 0.06087 0.0611 0.0613 0.30%
Amr::initialInit() 1 0.05777 0.05785 0.05788 0.29%
Castro::derive() 44 0.04733 0.04945 0.0506 0.25%
MultiFab::Saxpy() 50 0.04141 0.04751 0.04959 0.25%
Castro::finalize_do_advance() 10 0.03639 0.04118 0.04299 0.21%
Amr::InitializeInit() 1 0.04184 0.04216 0.04237 0.21%
Amr::defBaseLevel() 1 0.04183 0.04215 0.04236 0.21%
Castro::construct_old_source() 40 0.03075 0.03323 0.0345 0.17%
Castro::computeNewDt() 9 0.0245 0.0246 0.02486 0.12%
Castro::apply_source_to_state() 20 0.01676 0.01887 0.01988 0.10%
Castro::Castro() 1 0.01914 0.01923 0.0193 0.10%
VisMF::Write(FabArray) 2 0.01337 0.01439 0.01733 0.09%
Amr::FinalizeInit() 1 0.01552 0.01569 0.01604 0.08%
Castro::volWgtSum() 132 0.01411 0.01464 0.0149 0.07%
Castro::check_for_nan() 20 0.01242 0.0136 0.0142 0.07%
MultiFab::contains_nan() 20 0.01239 0.01357 0.01417 0.07%
Castro::initMFs() 1 0.01204 0.01206 0.01209 0.06%
Castro::initData() 1 0.0114 0.01157 0.01173 0.06%
AmrLevel::AmrLevel(dm) 1 0.01103 0.01116 0.01145 0.06%
StateData::define() 5 0.01102 0.01114 0.01143 0.06%
Castro::enforce_min_density() 62 0.01026 0.01039 0.01064 0.05%
Castro::post_init() 1 0.009793 0.009827 0.009874 0.05%
Castro::swap_state_time_levels() 10 0.008317 0.008582 0.009368 0.05%
Castro::computeInitialDt() 2 0.005397 0.005579 0.005945 0.03%
Castro::buildMetrics() 1 0.003867 0.003887 0.003902 0.02%
Castro::locWgtSum() 33 0.003328 0.003402 0.003441 0.02%
Castro::post_regrid() 1 0.002957 0.002981 0.003 0.01%
Castro::finalize_advance() 10 0.001332 0.001546 0.00167 0.01%
Castro::enforce_consistent_e() 1 0.0004209 0.0004509 0.0004986 0.00%
Amr::InitAmr() 1 0.0002899 0.0003365 0.0004658 0.00%
FabArrayBase::getCPC() 148 0.0002839 0.0003051 0.0003263 0.00%
DistributionMapping::SFCProcessorMapDoIt() 1 1.226e-05 0.0001704 0.0002241 0.00%
DistributionMapping::LeastUsedCPUs() 1 7.77e-06 0.0001643 0.0002176 0.00%
StateDataPhysBCFunct::() 148 0.0001695 0.0001802 0.0001881 0.00%
FabArrayBase::CPC::define() 6 0.0001247 0.0001405 0.0001575 0.00%
FabArray::setDomainBndry() 148 0.0001224 0.0001357 0.0001436 0.00%
Amr::writeSmallPlotFile() 1 3.387e-05 4.806e-05 7.81e-05 0.00%
Castro::FluxRegCrseInit 10 1.159e-05 2.62e-05 3.821e-05 0.00%
Castro::enforce_speed_limit() 62 3.363e-05 3.608e-05 3.728e-05 0.00%
Castro::create_source_corrector() 10 9.063e-06 1.016e-05 1.114e-05 0.00%
Castro::retry_advance_ctu() 10 7.326e-06 9.21e-06 1.106e-05 0.00%
Amr::initSubcycle() 1 8.115e-06 8.636e-06 9.348e-06 0.00%
Castro::FluxRegFineAdd() 10 3.071e-06 3.489e-06 3.932e-06 0.00%
DistributionMapping::Distribute() 1 7.71e-07 8.112e-07 8.38e-07 0.00%
-------------------------------------------------------------------------------------------
Unused ParmParse Variables:
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
[TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2]
AMReX (22.08-17-g8294c3afbcbb) finalized