MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-17-g8294c3afbcbb) initialized Starting run at 13:50:35 UTC on 2022-08-24. Successfully read inputs file ... Castro git describe: 22.08-12-gb5ab86608 AMReX git describe: 22.08-17-g8294c3afb Microphysics git describe: 22.08-4-gb9a0f9aa reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... hydro CFL timestep constrained at (i,j,k) = (31,31,31) INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01703734 seconds hydro CFL timestep constrained at (i,j,k) = (31,31,31) [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 hydro CFL timestep constrained at (i,j,k) = (31,31,31) [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.390259581 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 hydro CFL timestep constrained at (i,j,k) = (31,31,31) [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.345705614 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 hydro CFL timestep constrained at (i,j,k) = (31,31,30) [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.344677283 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 hydro CFL timestep constrained at (i,j,k) = (31,31,30) [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342531032 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 hydro CFL timestep constrained at (i,j,k) = (30,31,31) [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.353621936 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 hydro CFL timestep constrained at (i,j,k) = (30,31,31) [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 hydro CFL timestep constrained at (i,j,k) = (31,31,30) [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.353516565 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 hydro CFL timestep constrained at (i,j,k) = (31,31,30) [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 hydro CFL timestep constrained at (i,j,k) = (30,31,31) [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.339722248 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 hydro CFL timestep constrained at (i,j,k) = (30,31,31) [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.343471315 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.344425992 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,30) [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.343674955 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.011116139 seconds Ending run at 13:50:39 UTC on 2022-08-24. Run time = 3.715633457 Run time without initialization = 3.520829553 Average number of zones advanced per microsecond: 0.745 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.715 ... 3.715 ... 3.716 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0666 2.4195 2.5293 68.07% Castro::do_advance_ctu() 10 0.04619 0.1571 0.5137 13.82% Gravity::make_radial_gravity() 21 0.3563 0.3677 0.3925 10.56% Castro::estTimeStep() 21 0.03686 0.08213 0.1264 3.40% Castro::initData() 1 0.04135 0.07989 0.1232 3.31% FabArray::ParallelCopy_finish() 41 0.04485 0.06261 0.1118 3.01% FabArray::setVal() 143 0.06569 0.07013 0.07322 1.97% Castro::reset_internal_energy(Fab) 1008 0.04943 0.05055 0.05184 1.40% FabArray::ParallelCopy_nowait() 41 0.02832 0.04522 0.05065 1.36% StateData::FillBoundary(geom) 41 0.03459 0.04231 0.04707 1.27% Castro::normalize_species() 62 0.04101 0.04179 0.04312 1.16% FillPatchIterator::Initialize 41 0.02578 0.03658 0.0408 1.10% Gravity::interpolate_monopole_grav() 21 0.02671 0.02747 0.02791 0.75% Castro::construct_new_gravity_source() 10 0.02274 0.02381 0.02746 0.74% Castro::expand_state() 10 0.009824 0.01891 0.02212 0.60% Castro::computeTemp() 63 0.01822 0.01929 0.0201 0.54% Castro::initialize_do_advance() 10 0.01097 0.01792 0.01981 0.53% VisMF::Write(FabArray) 2 0.01291 0.01401 0.01923 0.52% MultiFab::Saxpy() 20 0.01045 0.01455 0.01617 0.44% Amr::writePlotFile() 2 0.009204 0.01449 0.01585 0.43% Gravity::get_new_grav_vector() 11 0.007859 0.01138 0.01264 0.34% FabArray::setDomainBndry() 41 0.004943 0.01041 0.01229 0.33% MultiFab::contains_nan() 20 0.01076 0.01137 0.01225 0.33% Castro::initialize_advance() 10 0.01064 0.01105 0.01224 0.33% Castro::construct_old_gravity_source() 10 0.004914 0.01024 0.01208 0.32% Gravity::get_old_grav_vector() 10 0.005448 0.009425 0.01084 0.29% Castro::initMFs() 1 0.006795 0.007209 0.008398 0.23% main() 1 0.006291 0.006852 0.007354 0.20% Castro::construct_new_source() 50 0.00525 0.00654 0.007147 0.19% Castro::enforce_min_density() 62 0.006298 0.006769 0.007101 0.19% StateData::define() 4 0.005579 0.005792 0.00633 0.17% Castro::swap_state_time_levels() 10 0.003433 0.004617 0.005263 0.14% Amr::coarseTimeStep() 10 0.001367 0.001939 0.00236 0.06% Castro::finalize_do_advance() 10 0.0007735 0.001682 0.001928 0.05% Castro::buildMetrics() 1 0.001605 0.001668 0.001838 0.05% Amr::InitAmr() 1 0.0002632 0.0002959 0.0004471 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002767 0.0002949 0.000316 0.01% Amr::timeStep() 10 0.0001689 0.0001921 0.0002444 0.01% Castro::clean_state() 62 0.0001171 0.0001668 0.0001984 0.01% DistributionMapping::LeastUsedCPUs() 1 7.707e-06 0.0001666 0.0001976 0.01% StateDataPhysBCFunct::() 41 8.586e-05 0.0001229 0.0001433 0.00% Castro::enforce_consistent_e() 1 7.449e-05 8.722e-05 0.0001072 0.00% FabArray::ParallelCopy() 41 6.101e-05 8.496e-05 9.664e-05 0.00% Castro::do_old_sources() 10 3.921e-05 6.843e-05 9.123e-05 0.00% Castro::construct_old_source() 50 2.8e-05 6.816e-05 8.682e-05 0.00% Amr::FinalizeInit() 1 3.734e-06 1.453e-05 8.362e-05 0.00% FillPatchSingleLevel 41 5.375e-05 6.817e-05 8.352e-05 0.00% Castro::do_new_sources() 10 3.941e-05 6.631e-05 7.936e-05 0.00% Castro::Castro() 1 5.568e-05 6.361e-05 7.771e-05 0.00% Amr::writeSmallPlotFile() 1 2.459e-05 5.314e-05 7.157e-05 0.00% Castro::advance() 10 2.941e-05 4.587e-05 7.12e-05 0.00% Castro::apply_source_to_state() 20 2.465e-05 4.86e-05 7.054e-05 0.00% Castro::construct_old_gravity() 10 2.831e-05 5.193e-05 6.955e-05 0.00% FabArrayBase::getCPC() 41 4.178e-05 5.582e-05 6.562e-05 0.00% Castro::finalize_advance() 10 4.989e-05 5.425e-05 5.929e-05 0.00% Amr::defBaseLevel() 1 4.151e-05 4.813e-05 5.695e-05 0.00% Castro::subcycle_advance_ctu() 10 2.809e-05 4.325e-05 4.913e-05 0.00% Castro::construct_new_gravity() 10 3.716e-05 4.394e-05 4.909e-05 0.00% Castro::enforce_speed_limit() 62 2.117e-05 2.703e-05 3.007e-05 0.00% FabArrayBase::CPC::define() 2 2.322e-05 2.71e-05 2.979e-05 0.00% Castro::computeNewDt() 9 8.977e-06 1.277e-05 2.798e-05 0.00% Castro::check_for_nan() 20 1.992e-05 2.429e-05 2.786e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.951e-06 1.209e-05 1.936e-05 0.00% Castro::post_timestep() 10 1.266e-05 1.501e-05 1.807e-05 0.00% Gravity::swapTimeLevels() 10 6.702e-06 1.208e-05 1.523e-05 0.00% Castro::create_source_corrector() 10 6.127e-06 1.031e-05 1.309e-05 0.00% Gravity::set_mass_offset() 10 6.532e-06 9.076e-06 1.085e-05 0.00% Castro::FluxRegCrseInit 10 5.74e-06 8.502e-06 1.045e-05 0.00% Amr::initSubcycle() 1 8.272e-06 9.006e-06 9.6e-06 0.00% Amr::InitializeInit() 1 1.82e-06 3.906e-06 7.674e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.587e-06 4.568e-06 6.399e-06 0.00% Castro::retry_advance_ctu() 10 5.107e-06 5.804e-06 6.343e-06 0.00% Castro::post_init() 1 2.74e-06 3.592e-06 4.964e-06 0.00% Castro::computeInitialDt() 2 3.466e-06 4.206e-06 4.897e-06 0.00% Castro::post_regrid() 1 2.095e-06 3.071e-06 4.505e-06 0.00% Amr::init() 1 1.654e-06 2.147e-06 2.873e-06 0.00% Castro::FluxRegFineAdd() 10 1.906e-06 2.372e-06 2.755e-06 0.00% Amr::initialInit() 1 1.293e-06 1.582e-06 2.19e-06 0.00% DistributionMapping::Distribute() 1 8.69e-07 1.16e-06 1.532e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.715 3.715 3.716 100.00% Amr::coarseTimeStep() 10 3.502 3.502 3.502 94.26% Amr::timeStep() 10 3.489 3.49 3.49 93.93% Castro::advance() 10 3.472 3.473 3.474 93.48% Castro::subcycle_advance_ctu() 10 3.398 3.399 3.4 91.51% Castro::do_advance_ctu() 10 3.398 3.399 3.4 91.51% Castro::construct_ctu_hydro_source() 10 2.067 2.419 2.529 68.07% Gravity::make_radial_gravity() 21 0.3563 0.3677 0.3925 10.56% Gravity::get_new_grav_vector() 11 0.2381 0.2429 0.2446 6.58% Castro::construct_old_gravity() 10 0.2051 0.2152 0.2358 6.35% Gravity::get_old_grav_vector() 10 0.2042 0.2144 0.2352 6.33% Castro::construct_new_gravity() 10 0.2106 0.2147 0.2161 5.82% FillPatchIterator::Initialize 41 0.1919 0.1975 0.2063 5.55% Amr::init() 1 0.1942 0.1944 0.1944 5.23% Castro::initialize_do_advance() 10 0.1585 0.1802 0.1892 5.09% Amr::initialInit() 1 0.1768 0.1771 0.1775 4.78% FillPatchSingleLevel 41 0.1398 0.1505 0.1756 4.73% Amr::InitializeInit() 1 0.06214 0.1013 0.1455 3.92% Amr::defBaseLevel() 1 0.06213 0.1013 0.1455 3.92% FabArray::ParallelCopy() 41 0.09531 0.108 0.1403 3.77% Castro::expand_state() 10 0.1193 0.1321 0.1388 3.73% Castro::initData() 1 0.04538 0.08394 0.1268 3.41% Castro::estTimeStep() 21 0.03686 0.08213 0.1264 3.40% Castro::clean_state() 62 0.1158 0.118 0.1203 3.24% Amr::FinalizeInit() 1 0.03134 0.07576 0.1148 3.09% FabArray::ParallelCopy_finish() 41 0.04485 0.06261 0.1118 3.01% Castro::computeInitialDt() 2 0.002263 0.04644 0.08545 2.30% Castro::initialize_advance() 10 0.07285 0.07394 0.07517 2.02% FabArray::setVal() 143 0.06569 0.07013 0.07322 1.97% Castro::computeTemp() 63 0.06859 0.07014 0.07179 1.93% Castro::do_new_sources() 10 0.05956 0.06398 0.06834 1.84% Castro::reset_internal_energy(MultiFab) 63 0.04974 0.05085 0.05215 1.40% Castro::reset_internal_energy(Fab) 1008 0.04943 0.05055 0.05184 1.40% FabArray::ParallelCopy_nowait() 41 0.02839 0.0453 0.05073 1.37% Castro::do_old_sources() 10 0.0339 0.0456 0.04952 1.33% StateDataPhysBCFunct::() 41 0.03468 0.04243 0.0472 1.27% StateData::FillBoundary(geom) 41 0.03459 0.04231 0.04707 1.27% Castro::normalize_species() 62 0.04101 0.04179 0.04312 1.16% Castro::construct_new_source() 50 0.02935 0.03035 0.03271 0.88% Castro::post_init() 1 0.02878 0.02897 0.02915 0.78% Amr::writePlotFile() 2 0.02809 0.0285 0.02876 0.77% Gravity::interpolate_monopole_grav() 21 0.02671 0.02747 0.02791 0.75% Castro::construct_new_gravity_source() 10 0.02274 0.02381 0.02746 0.74% VisMF::Write(FabArray) 2 0.01291 0.01401 0.01923 0.52% Castro::post_timestep() 10 0.01588 0.01626 0.01677 0.45% Castro::apply_source_to_state() 20 0.01048 0.01459 0.01623 0.44% MultiFab::Saxpy() 20 0.01045 0.01455 0.01617 0.44% FabArray::setDomainBndry() 41 0.004943 0.01041 0.01229 0.33% Castro::check_for_nan() 20 0.01079 0.01139 0.01228 0.33% MultiFab::contains_nan() 20 0.01076 0.01137 0.01225 0.33% Castro::construct_old_source() 50 0.004942 0.01031 0.01216 0.33% Castro::Castro() 1 0.01103 0.01134 0.01215 0.33% Castro::construct_old_gravity_source() 10 0.004914 0.01024 0.01208 0.32% Castro::computeNewDt() 9 0.009434 0.009452 0.009481 0.26% Castro::initMFs() 1 0.006795 0.007209 0.008398 0.23% Castro::enforce_min_density() 62 0.006298 0.006769 0.007101 0.19% AmrLevel::AmrLevel(dm) 1 0.005587 0.005804 0.006344 0.17% StateData::define() 4 0.005579 0.005792 0.00633 0.17% Castro::swap_state_time_levels() 10 0.003433 0.004617 0.005263 0.14% Castro::post_regrid() 1 0.001513 0.001635 0.002013 0.05% Castro::buildMetrics() 1 0.001726 0.001797 0.001989 0.05% Castro::finalize_do_advance() 10 0.0007735 0.001682 0.001928 0.05% Amr::InitAmr() 1 0.0002715 0.0003049 0.0004566 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.291e-05 0.0001724 0.0002053 0.01% DistributionMapping::LeastUsedCPUs() 1 7.707e-06 0.0001666 0.0001976 0.01% Castro::enforce_consistent_e() 1 7.449e-05 8.722e-05 0.0001072 0.00% FabArrayBase::getCPC() 41 7.118e-05 8.292e-05 9.357e-05 0.00% Amr::writeSmallPlotFile() 1 2.459e-05 5.314e-05 7.157e-05 0.00% Castro::finalize_advance() 10 5.824e-05 6.512e-05 7.02e-05 0.00% Castro::enforce_speed_limit() 62 2.117e-05 2.703e-05 3.007e-05 0.00% FabArrayBase::CPC::define() 2 2.322e-05 2.71e-05 2.979e-05 0.00% Gravity::swapTimeLevels() 10 6.702e-06 1.208e-05 1.523e-05 0.00% Castro::create_source_corrector() 10 6.127e-06 1.031e-05 1.309e-05 0.00% Gravity::set_mass_offset() 10 6.532e-06 9.076e-06 1.085e-05 0.00% Castro::FluxRegCrseInit 10 5.74e-06 8.502e-06 1.045e-05 0.00% Amr::initSubcycle() 1 8.272e-06 9.006e-06 9.6e-06 0.00% Castro::retry_advance_ctu() 10 5.107e-06 5.804e-06 6.343e-06 0.00% Castro::FluxRegFineAdd() 10 1.906e-06 2.372e-06 2.755e-06 0.00% DistributionMapping::Distribute() 1 8.69e-07 1.16e-06 1.532e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-17-g8294c3afbcbb) finalized