MPI initialized with 8 MPI processes
MPI initialized with thread support level 3
AMReX (22.08-18-g3d29fd7d0e81) initialized
Starting run at 06:37:09 UTC on 2022-08-25.
Successfully read inputs file ...
Castro git describe: 22.08-11-ga978fcf88
AMReX git describe: 22.08-18-g3d29fd7d0
Microphysics git describe: 22.08-4-gb9a0f9aa
radiation initialized, nGroups = 1
reading extern runtime parameters ...
1 Species:
X
Radiation::nGroups = 1
Successfully read inputs file ...
Creating Radiation object
processors = 8
do_sync = 1
c = 2.99792458e+10
sigma = 5.670373e-05
reltol = 1e-06
abstol = 0
maxiter = 50
relInTol = 0.0001
absInTol = 0
maxInIter = 30
delta_e_rat_dt_tol = 100
delta_T_rat_dt_tol = 100
limiter = 0
closure = 3
update_limiter = 1000
update_planck = 1000
update_rosseland = 1000
delta_temp = 0.0001
underfac = 1
do_multigroup = 0
accelerate = 1
verbose = 2
SolverType = 5: SGFLDSolver
rad_hydro_combined = 1
comoving = 1
dimension 0 rad boundary conditions = 102, 102
dimension 1 rad boundary conditions = 102, 102
dimension 2 rad boundary conditions = 102, 102
Regridding radiation object at level 0...
done
hmabec.bho = 0
hmabec.use_subgrids = 0
hmabec.verbose = 1
hmabec.verbose_threshold = 0
Warning: the following castro.* parameters are ignored
castro.gravity = 0
grid_places() time: 0.028444839 new finest: 1
Regridding radiation object at level 1...
done
Warning: the following castro.* parameters are ignored
castro.gravity = 0
Now regridding at level lbase = 0
grid_places() time: 0.017734702 new finest: 1
Regridding radiation object at level 1...
done
Warning: the following castro.* parameters are ignored
castro.gravity = 0
STEP = 0 TIME = 0 : REGRID with lbase = 0
Level 1 8 grids 4096 cells 0.0244140625 % of domain
smallest grid: 8 x 8 x 8 biggest grid: 8 x 8 x 8
Integrated Fluid Mass is 0.015394862320617770657
Integrated Fluid Energy is 29997674.940313063562
Integrated Radiant Energy is 0
Flux Register Energy is 0
Integrated Total Energy is 29997674.940313063562
INITIAL GRIDS
Level 0 512 grids 2097152 cells 100 % of domain
smallest grid: 16 x 16 x 16 biggest grid: 16 x 16 x 16
Level 1 8 grids 4096 cells 0.0244140625 % of domain
smallest grid: 8 x 8 x 8 biggest grid: 8 x 8 x 8
PLOTFILE: file = rad-thermalwave-3d_plt00000
Write plotfile time = 1.299830398 seconds
[Level 0 step 1] ADVANCE with dt = 1e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
hmabec.kdim = 5
hmabec.struct_flag = HYPRE_PFMG
hmabec.pfmg_relax_type = 1
hmabec.pfmg_pre_relax = 1
hmabec.pfmg_post_relax = 1
Radiation Update: Iteration 1, Relative = 1302911.375186907826
Absolute = 30717.669438446420827
Radiation Update: Iteration 2, Relative = 0.99981662868864995541
Absolute = 23038.180019796534907
Radiation Update: Iteration 3, Relative = 2.5049675977856615816
Absolute = 17278.601887119148159
Radiation Update: Iteration 4, Relative = 0.2499976931502309041
Absolute = 12958.883447859625448
Radiation Update: Iteration 5, Relative = 0.24999144178766968816
Absolute = 9718.9498998517119617
Radiation Update: Iteration 6, Relative = 0.24997036239891964882
Absolute = 7288.6810285310093604
Radiation Update: Iteration 7, Relative = 0.24990069025204844633
Absolute = 5465.2035999699801323
Radiation Update: Iteration 8, Relative = 0.24967414999257170338
Absolute = 4095.7292139944893279
Radiation Update: Iteration 9, Relative = 0.2489435218793252802
Absolute = 3064.138345963525353
Radiation Update: Iteration 10, Relative = 0.24661312439044863476
Absolute = 2279.7979112415941927
Radiation Update: Iteration 11, Relative = 0.23933584867758372905
Absolute = 1666.8862893659916153
Radiation Update: Iteration 12, Relative = 0.21783412647545336016
Absolute = 1154.0299950771404838
Radiation Update: Iteration 13, Relative = 0.16356869747329380593
Absolute = 677.78232869804242
Radiation Update: Iteration 14, Relative = 0.093400978741454462884
Absolute = 253.16058222777019182
Radiation Update: Iteration 15, Relative = 0.037594186600442197621
Absolute = 32.948220825791395328
Radiation Update: Iteration 16, Relative = 0.013496216648835906993
Absolute = 0.51586165244816584163
Radiation Update: Iteration 17, Relative = 0.0035380391166708199079
Absolute = 0.00012546752714115427807
Radiation Update: Iteration 18, Relative = 0.00067881126669380243473
Absolute = 6.8453354484798722979e-07
Radiation Update: Iteration 19, Relative = 2.860667392143744868e-16
Absolute = 9.0949470177292823792e-13
done
[Level 0 step 1] Advanced 2097152 cells
[Level 1 step 1] ADVANCE with dt = 5e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 1740874.6688549935352
Absolute = 58670.981734533736017
Radiation Update: Iteration 2, Relative = 1.3693198091184299869
Absolute = 44003.166299775097286
Radiation Update: Iteration 3, Relative = 8.419640682605638915
Absolute = 33002.356568688643165
Radiation Update: Iteration 4, Relative = 0.37636607390890908231
Absolute = 24751.70969527302077
Radiation Update: Iteration 5, Relative = 0.28749646911704862529
Absolute = 18563.708290616239537
Radiation Update: Iteration 6, Relative = 0.24999528368166121228
Absolute = 13922.634914905989717
Radiation Update: Iteration 7, Relative = 0.24998543712192419775
Absolute = 10441.630569243545324
Radiation Update: Iteration 8, Relative = 0.24995183422730840594
Absolute = 7830.3222983312807628
Radiation Update: Iteration 9, Relative = 0.24984318291364171483
Absolute = 5870.5658970819858951
Radiation Update: Iteration 10, Relative = 0.2494945806880975725
Absolute = 4397.7005530554160941
Radiation Update: Iteration 11, Relative = 0.24838332641064106432
Absolute = 3285.7977767612683238
Radiation Update: Iteration 12, Relative = 0.24487943197622155656
Absolute = 2434.8213845715126808
Radiation Update: Iteration 13, Relative = 0.23412915130706507538
Absolute = 1757.8693295807570394
Radiation Update: Iteration 14, Relative = 0.20363467702261919823
Absolute = 1170.950060656999085
Radiation Update: Iteration 15, Relative = 0.1344143515864385241
Absolute = 615.52348193750549399
Radiation Update: Iteration 16, Relative = 0.044161267403394710573
Absolute = 174.17271981381782098
Radiation Update: Iteration 17, Relative = 0.014457635510783441515
Absolute = 12.704806842327798222
Radiation Update: Iteration 18, Relative = 0.0033113792966396682696
Absolute = 0.06413466756021080073
Radiation Update: Iteration 19, Relative = 0.0013412046076229323585
Absolute = 2.8354981784772803621e-06
Radiation Update: Iteration 20, Relative = 3.7960979312931694988e-16
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 1] Advanced 4096 cells
[Level 1 step 2] ADVANCE with dt = 5e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 1.1293800200770882647
Absolute = 58.814656583404484991
Radiation Update: Iteration 2, Relative = 0.24676661791180254379
Absolute = 1.4191275508765102131
Radiation Update: Iteration 3, Relative = 0.038876324387613812872
Absolute = 0.00081055567079602042213
Radiation Update: Iteration 4, Relative = 0.0026439701273685560674
Absolute = 5.6305707456516529419e-06
Radiation Update: Iteration 5, Relative = 3.8575994825843236132e-16
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 2] Advanced 4096 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394862320617770657
Integrated Fluid Energy is 709447.77384859812446
Integrated Radiant Energy is 29288227.166465062648
Flux Register Energy is -1.162261753602664722e-06
Integrated Total Energy is 29997674.940312497318
[STEP 1] Coarse TimeStep time: 17.19091267
[STEP 1] FAB kilobyte spread across MPI nodes: [395684 ... 395684]
STEP = 1 TIME = 1e-15 DT = 1e-15
[Level 0 step 2] ADVANCE with dt = 1.05e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
Radiation Update: Iteration 1, Relative = 41.075798320370708439
Absolute = 285.14215141043223412
Radiation Update: Iteration 2, Relative = 0.70128009910487620893
Absolute = 33.627916367236139195
Radiation Update: Iteration 3, Relative = 0.084541388220853899704
Absolute = 0.54191828436341893394
Radiation Update: Iteration 4, Relative = 0.0040435740078626700167
Absolute = 0.00013980735775476205163
Radiation Update: Iteration 5, Relative = 0.00023937764697501740549
Absolute = 8.0258337664673717882e-07
Radiation Update: Iteration 6, Relative = 4.1346495890416320348e-16
Absolute = 9.0949470177292823792e-13
done
[Level 0 step 2] Advanced 2097152 cells
[Level 1 step 3] ADVANCE with dt = 5.25e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.54641284635441822459
Absolute = 2.943624464462921253
Radiation Update: Iteration 2, Relative = 0.083948168272416148761
Absolute = 0.024972607350381537117
Radiation Update: Iteration 3, Relative = 0.0076108392528985305617
Absolute = 0.00018989121619306104094
Radiation Update: Iteration 4, Relative = 3.3824238086103671142e-14
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 3] Advanced 4096 cells
[Level 1 step 4] ADVANCE with dt = 5.25e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.35303629913330941692
Absolute = 2.9178944731206577501
Radiation Update: Iteration 2, Relative = 0.036936704463442812663
Absolute = 0.020380594366432802644
Radiation Update: Iteration 3, Relative = 0.0022787336352683984497
Absolute = 0.00013162435777047676311
Radiation Update: Iteration 4, Relative = 2.1478205325067846024e-14
Absolute = 9.0949470177292823792e-13
done
[Level 1 step 4] Advanced 4096 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394862320617770657
Integrated Fluid Energy is 710342.77262448787224
Integrated Radiant Energy is 29287332.167688909918
Flux Register Energy is -9.7548753887645159065e-07
Integrated Total Energy is 29997674.940312422812
[STEP 2] Coarse TimeStep time: 4.824507456
[STEP 2] FAB kilobyte spread across MPI nodes: [395905 ... 395905]
STEP = 2 TIME = 2.05e-15 DT = 1.05e-15
Now regridding at level lbase = 0
grid_places() time: 0.012687231 new finest: 1
Regridding radiation object at level 1...
done
Warning: the following castro.* parameters are ignored
castro.gravity = 0
STEP = 2 TIME = 2.05e-15 : REGRID with lbase = 0
Level 1 8 grids 32768 cells 0.1953125 % of domain
smallest grid: 16 x 16 x 16 biggest grid: 16 x 16 x 16
[Level 0 step 3] ADVANCE with dt = 1.1025e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
Radiation Update: Iteration 1, Relative = 20.853193544900342715
Absolute = 285.13246179569932792
Radiation Update: Iteration 2, Relative = 0.58147683183852671984
Absolute = 33.626313170630965033
Radiation Update: Iteration 3, Relative = 0.04988372098437889729
Absolute = 0.54187769457439571852
Radiation Update: Iteration 4, Relative = 0.0026300192682640580362
Absolute = 0.00013994879009260330349
Radiation Update: Iteration 5, Relative = 0.00013963780368088883881
Absolute = 8.6663357645733185564e-07
Radiation Update: Iteration 6, Relative = 2.8841654045367306109e-16
Absolute = 9.0949470177292823792e-13
done
[Level 0 step 3] Advanced 2097152 cells
[Level 1 step 5] ADVANCE with dt = 5.5125e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.27369076291214472496
Absolute = 3.0411087480216050238
Radiation Update: Iteration 2, Relative = 0.021992160092044642922
Absolute = 0.019316320396177033558
Radiation Update: Iteration 3, Relative = 0.00094537318954255537395
Absolute = 0.00011619634420867441804
Radiation Update: Iteration 4, Relative = 2.2282572219850919393e-14
Absolute = 9.0949470177292823792e-13
done
[Level 1 step 5] Advanced 32768 cells
[Level 1 step 6] ADVANCE with dt = 5.5125e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.214671963455638104
Absolute = 3.0206419259917058895
Radiation Update: Iteration 2, Relative = 0.013431330131245214354
Absolute = 0.017036881970934558694
Radiation Update: Iteration 3, Relative = 0.00049108510404969035051
Absolute = 9.205482120222541198e-05
Radiation Update: Iteration 4, Relative = 1.6659614140720528382e-14
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 6] Advanced 32768 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394862320617925047
Integrated Fluid Energy is 711281.07259683695156
Integrated Radiant Energy is 29286393.867715489119
Flux Register Energy is 9.276520769545866674e-14
Integrated Total Energy is 29997674.940312325954
[STEP 3] Coarse TimeStep time: 4.994708933
[STEP 3] FAB kilobyte spread across MPI nodes: [395905 ... 395905]
STEP = 3 TIME = 3.1525e-15 DT = 1.1025e-15
[Level 0 step 4] ADVANCE with dt = 1.157625e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
Radiation Update: Iteration 1, Relative = 14.59475485414557383
Absolute = 285.07206111116738612
Radiation Update: Iteration 2, Relative = 0.51099978466234785568
Absolute = 33.613575909575047262
Radiation Update: Iteration 3, Relative = 0.036631894152134872322
Absolute = 0.54147749418871171656
Radiation Update: Iteration 4, Relative = 0.0020179461202736261906
Absolute = 0.00013984414545120671391
Radiation Update: Iteration 5, Relative = 4.6879371074670606551e-15
Absolute = 8.1854523159563541412e-12
done
[Level 0 step 4] Advanced 2097152 cells
[Level 1 step 7] ADVANCE with dt = 5.788125e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.1854133078333077278
Absolute = 3.1526844403844727083
Radiation Update: Iteration 2, Relative = 0.0098401135622737251341
Absolute = 0.016934946691190333468
Radiation Update: Iteration 3, Relative = 0.00039205049443860595908
Absolute = 8.7635873470048863965e-05
Radiation Update: Iteration 4, Relative = 1.8625811883709301365e-14
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 7] Advanced 32768 cells
[Level 1 step 8] ADVANCE with dt = 5.788125e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.15628586633639340864
Absolute = 3.1347432355308662011
Radiation Update: Iteration 2, Relative = 0.0069133105575895923214
Absolute = 0.01543235836408385353
Radiation Update: Iteration 3, Relative = 0.00029546802934620131553
Absolute = 7.36117732458296814e-05
Radiation Update: Iteration 4, Relative = 1.5099478275432147557e-14
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 8] Advanced 32768 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394862320617925047
Integrated Fluid Energy is 712256.71972726588137
Integrated Radiant Energy is 29285418.220585085452
Flux Register Energy is -7.5475644353645015166e-13
Integrated Total Energy is 29997674.940312352031
[STEP 4] Coarse TimeStep time: 4.320567761
[STEP 4] FAB kilobyte spread across MPI nodes: [398797 ... 398797]
STEP = 4 TIME = 4.310125e-15 DT = 1.157625e-15
Now regridding at level lbase = 0
grid_places() time: 0.012881225 new finest: 1
Regridding radiation object at level 1...
done
Warning: the following castro.* parameters are ignored
castro.gravity = 0
STEP = 4 TIME = 4.310125e-15 : REGRID with lbase = 0
Level 1 8 grids 32768 cells 0.1953125 % of domain
smallest grid: 16 x 16 x 16 biggest grid: 16 x 16 x 16
[Level 0 step 5] ADVANCE with dt = 1.21550625e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
Radiation Update: Iteration 1, Relative = 11.529747076407815598
Absolute = 285.00830918719248075
Radiation Update: Iteration 2, Relative = 0.46308164709588778285
Absolute = 33.6000980342200819
Radiation Update: Iteration 3, Relative = 0.029571895105505126289
Absolute = 0.5410534340931008046
Radiation Update: Iteration 4, Relative = 0.0016787271648403927216
Absolute = 0.00013971970520287868567
Radiation Update: Iteration 5, Relative = 7.269900045286520642e-15
Absolute = 1.0004441719502210617e-11
done
[Level 0 step 5] Advanced 2097152 cells
[Level 1 step 9] ADVANCE with dt = 6.07753125e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.14182061814646054754
Absolute = 3.2742810833836735185
Radiation Update: Iteration 2, Relative = 0.0056134926065436862447
Absolute = 0.015706872603409749445
Radiation Update: Iteration 3, Relative = 0.0002514156635199079671
Absolute = 7.3175931493807411243e-05
Radiation Update: Iteration 4, Relative = 1.7771949245841021698e-14
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 9] Advanced 32768 cells
[Level 1 step 10] ADVANCE with dt = 6.07753125e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.12412021608235490611
Absolute = 3.2576373964193123811
Radiation Update: Iteration 2, Relative = 0.0042605287980598399722
Absolute = 0.014576246833332362485
Radiation Update: Iteration 3, Relative = 0.00019911742446565195591
Absolute = 6.3535372536449585823e-05
Radiation Update: Iteration 4, Relative = 1.4787944692008772949e-14
Absolute = 9.0949470177292823792e-13
done
[Level 1 step 10] Advanced 32768 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394862320617925047
Integrated Fluid Energy is 713272.29498282133136
Integrated Radiant Energy is 29284402.645329594612
Flux Register Energy is -7.3713322727327423244e-13
Integrated Total Energy is 29997674.940312415361
[STEP 5] Coarse TimeStep time: 4.418279805
[STEP 5] FAB kilobyte spread across MPI nodes: [398797 ... 398797]
STEP = 5 TIME = 5.52563125e-15 DT = 1.21550625e-15
PLOTFILE: file = rad-thermalwave-3d_plt00005
Write plotfile time = 0.867728102 seconds
Ending run at 06:37:48 UTC on 2022-08-25.
Deleting radiation in variableCleanUp...
done
Run time = 38.42779531
Run time without initialization = 36.64457514
Average number of zones advanced per microsecond: 0.292
Average number of zones advanced per microsecond per rank: 0.036
TinyProfiler total time across processes [min...avg...max]: 38.42 ... 38.42 ... 38.43
-------------------------------------------------------------------------------------------
Name NCalls Excl. Min Excl. Avg Excl. Max Max %
-------------------------------------------------------------------------------------------
HypreMultiABec::solve 98 12.2784 12.3322 12.3991 32.27%
HypreMultiABec::setupSolver 98 11.51 11.58 11.63 30.27%
FabArray::ParallelCopy_finish() 963 0.2741 0.6737 1.772 4.61%
Radiation::compute_eta 98 1.21 1.273 1.301 3.39%
HypreMultiABec::finalizeMatrix 98 0.8368 0.9102 1.089 2.83%
HypreMultiABec::clearSolver 98 0.5814 0.9406 1.068 2.78%
Castro::derive() 144 0.7784 0.9515 1.016 2.64%
Radiation::get_planck_and_temp 98 0.761 0.8017 0.8258 2.15%
FillBoundary_finish() 181 0.04586 0.2369 0.7765 2.02%
update_rosseland_from_temp 83 0.7086 0.7518 0.7665 1.99%
HypreMultiABec::loadMatrix 98 0.5853 0.6198 0.6407 1.67%
FabArray::ParallelCopy_nowait() 963 0.3965 0.5678 0.6323 1.65%
Amr::writePlotFile() 2 0.4103 0.4894 0.5733 1.49%
FabArray::setVal() 959 0.4201 0.4725 0.4968 1.29%
FillPatchIterator::Initialize 258 0.3225 0.4178 0.4583 1.19%
RadSolve::levelBCoeffs 98 0.3761 0.4198 0.4391 1.14%
HypreMultiABec::loadLevelVectors 98 0.4056 0.4258 0.4327 1.13%
RadSolve::levelRhs 98 0.3499 0.3693 0.3821 0.99%
VisMF::Write(FabArray) 4 0.1948 0.2155 0.2818 0.73%
Radiation::compute_exchange 98 0.2614 0.2742 0.2792 0.73%
FillPatchSingleLevel 308 0.131 0.2335 0.2754 0.72%
RadSolve::levelFluxReg 98 0.1036 0.2178 0.2594 0.67%
Castro::reset_internal_energy(Fab) 9910 0.2105 0.2346 0.2416 0.63%
RadSolve::levelFlux 98 0.1466 0.2165 0.2415 0.63%
Castro::expand_state() 30 0.0961 0.1632 0.193 0.50%
FluxRegister::Reflux() 156 0.07324 0.1517 0.1809 0.47%
Radiation::get_rosseland 15 0.1504 0.1585 0.1688 0.44%
Radiation::single_group_update 15 0.08908 0.1422 0.162 0.42%
Radiation::internal_energy_update 98 0.1211 0.1281 0.1446 0.38%
Castro::initialize_do_advance() 15 0.07923 0.1122 0.1246 0.32%
Castro::computeTemp() 106 0.08734 0.1092 0.1192 0.31%
HypreMultiABec::finalizeVectors 98 0.08525 0.09592 0.1142 0.30%
Radiation::get_c_v 10625 0.0924 0.09783 0.103 0.27%
Castro::Castro() 5 0.06712 0.08648 0.1023 0.27%
HypreMultiABec::vectorSetBoxValues 5362 0.09256 0.09737 0.1015 0.26%
RadSolve::levelACoeffs 98 0.05621 0.08586 0.09766 0.25%
Castro::initialize_advance() 15 0.05188 0.08687 0.09713 0.25%
Radiation::scaledGradient 98 0.06554 0.08685 0.09613 0.25%
StateData::FillBoundary(geom) 1184 0.07207 0.08378 0.09058 0.24%
Castro::normalize_species() 88 0.08135 0.08392 0.08939 0.23%
Radiation:fluxLimiter 98 0.03888 0.07142 0.08668 0.23%
HypreMultiABec::bCoefficients 294 0.04727 0.07281 0.08363 0.22%
StateData::define() 15 0.04961 0.05859 0.07383 0.19%
Castro::volWgtSum() 36 0.03538 0.04603 0.07247 0.19%
HypreMultiABec::hmbc 8043 0.06509 0.06945 0.0717 0.19%
Castro::do_advance_ctu() 15 0.0316 0.05585 0.06953 0.18%
Castro::initMFs() 5 0.05122 0.05461 0.05924 0.15%
FillBoundary_nowait() 181 0.03703 0.05243 0.05845 0.15%
HypreMultiABec::hmmat3 1968 0.04973 0.05501 0.05818 0.15%
Castro::initData() 3 0.05157 0.05325 0.0569 0.15%
MultiFab::contains_nan() 30 0.03273 0.04553 0.05308 0.14%
Castro::swap_state_time_levels() 15 0.0476 0.04993 0.0516 0.13%
FabArray::setDomainBndry() 308 0.01882 0.03324 0.04381 0.11%
Castro::enforce_min_density() 88 0.03342 0.03893 0.04298 0.11%
HypreMultiABec::getAbsoluteResidual 98 0.0249 0.02955 0.04242 0.11%
HypreMultiABec::hmac 2681 0.02804 0.03099 0.03218 0.08%
HypreMultiABec::aCoefficients 98 0.01556 0.02785 0.03212 0.08%
Castro::buildMetrics() 5 0.0226 0.02542 0.03018 0.08%
main() 1 0.01683 0.02457 0.02763 0.07%
HypreMultiABec::getSolution 98 0.0162 0.02211 0.02453 0.06%
HypreMultiABec::vectorGetBoxValues 2681 0.01438 0.02136 0.024 0.06%
HypreMultiABec::boundaryFlux 98 0.01667 0.02162 0.02344 0.06%
Castro::apply_tagging_restrictions() 4 0.008924 0.009525 0.01128 0.03%
AMRErrorTag::operator() 4 0.007782 0.008719 0.01125 0.03%
AmrMesh::MakeNewGrids() 4 0.008548 0.009019 0.01024 0.03%
CellConservativeLinear::interp() 38 0.0004773 0.006124 0.008827 0.02%
DistributionMapping::LeastUsedCPUs() 10 0.0004829 0.003698 0.00861 0.02%
Castro::finalize_do_advance() 15 0.003086 0.004991 0.006023 0.02%
FabArrayBase::CPC::define() 190 0.003224 0.003661 0.004127 0.01%
Castro::enforce_consistent_e() 3 0.001603 0.00275 0.00315 0.01%
Castro::reset_internal_energy(MultiFab) 106 0.002 0.002349 0.002471 0.01%
FillPatchTwoLevels 138 0.0007075 0.001778 0.002424 0.01%
FabArrayBase::getCPC() 787 0.001251 0.001996 0.002352 0.01%
TagBoxArray::collate() 4 0.0003202 0.001585 0.002045 0.01%
Radiation::Regrid 5 0.001756 0.001859 0.002018 0.01%
Amr::regrid() 3 0.0003896 0.0006502 0.001982 0.01%
Castro::build_fine_mask() 18 0.0008072 0.001377 0.001783 0.00%
Castro::finalize_advance() 15 0.000518 0.0006977 0.001578 0.00%
FabArray::ParallelCopy() 963 0.000822 0.001236 0.001411 0.00%
Radiation::getBndryData 15 0.0008612 0.001056 0.001238 0.00%
OwnerMask() 4 0.0007591 0.0008593 0.001155 0.00%
RadSolve::levelSolve 98 0.0007996 0.000885 0.0009317 0.00%
StateDataPhysBCFunct::() 308 0.0006292 0.0008394 0.0009131 0.00%
Castro::post_timestep() 15 0.0004537 0.0005639 0.0008189 0.00%
amrex::average_down 19 0.0006256 0.0007412 0.0007872 0.00%
FabArrayBase::FB::FB() 27 0.0006403 0.0006965 0.0007555 0.00%
Amr::FinalizeInit() 1 7.306e-06 9.511e-05 0.0006817 0.00%
Amr::InitAmr() 1 0.0005747 0.0005929 0.000603 0.00%
Castro::init(old) 2 0.0003226 0.0005192 0.0006029 0.00%
Amr::coarseTimeStep() 5 0.0003072 0.0005336 0.0005686 0.00%
Amr::timeStep() 15 0.0002855 0.0003653 0.0004778 0.00%
FabArray::FillBoundary() 181 0.0002788 0.0003817 0.0004289 0.00%
Castro::clean_state() 88 0.0001782 0.0002465 0.0002862 0.00%
TagBoxArray::mapPRD 4 0.0001887 0.000214 0.0002808 0.00%
Amr::grid_places() 4 0.0001814 0.0002087 0.0002753 0.00%
Radiation::init_flux 10 2.932e-05 6.543e-05 0.0002086 0.00%
FabArrayBase::getFB() 181 0.0001275 0.0001504 0.0001652 0.00%
Radiation::deferred_sync_setup 5 7.633e-05 0.0001189 0.0001544 0.00%
Castro::post_init() 2 6.258e-05 9.119e-05 0.0001454 0.00%
Castro::advance() 15 9.153e-05 0.0001111 0.0001283 0.00%
Castro::errorEst() 4 7.021e-05 9.668e-05 0.0001232 0.00%
FillPatchInterp(Fab) 50 5.262e-05 9.523e-05 0.0001155 0.00%
Castro::subcycle_advance_ctu() 15 6.758e-05 8.826e-05 0.0001125 0.00%
FPinfo::FPinfo() 7 6.951e-05 8.845e-05 0.0001064 0.00%
FabSet::linComb() 30 9.487e-05 9.97e-05 0.0001024 0.00%
Castro::estTimeStep() 32 3.911e-05 5.755e-05 9.829e-05 0.00%
FabArrayBase::TheFPinfo() 50 6.573e-05 8.449e-05 9.664e-05 0.00%
DistributionMapping::SFCProcessorMapDoIt() 3 5.503e-05 6.532e-05 8.232e-05 0.00%
Amr::defBaseLevel() 1 5.377e-05 6.866e-05 7.576e-05 0.00%
Castro::enforce_speed_limit() 88 3.857e-05 5.75e-05 6.937e-05 0.00%
Castro::check_for_nan() 30 3.342e-05 4.519e-05 4.916e-05 0.00%
AmrLevel::AmrLevel(dm) 5 3.164e-05 3.985e-05 4.755e-05 0.00%
Radiation::pre_timestep 15 3.779e-05 4.208e-05 4.565e-05 0.00%
RadSolve::levelBndry 15 1.454e-05 2.163e-05 4.009e-05 0.00%
Amr::writeSmallPlotFile() 1 3.351e-05 3.55e-05 3.742e-05 0.00%
Castro::avgDown(state_indx) 19 9.37e-06 1.556e-05 2.851e-05 0.00%
Castro::retry_advance_ctu() 15 1.603e-05 2.213e-05 2.82e-05 0.00%
Castro::post_regrid() 8 1.753e-05 2.369e-05 2.733e-05 0.00%
ClusterList::intersect() 0 0 3.179e-06 2.543e-05 0.00%
Amr::initialInit() 1 1.268e-06 6.524e-06 2.332e-05 0.00%
Amr::bldFineLevels() 1 1.283e-05 1.587e-05 2.288e-05 0.00%
Castro::create_source_corrector() 15 1.223e-05 1.602e-05 1.866e-05 0.00%
Radiation::filBndry 10 1.449e-05 1.62e-05 1.789e-05 0.00%
Amr::initSubcycle() 1 9.496e-06 1.169e-05 1.556e-05 0.00%
amrex::average_down_w_geom 19 8.473e-06 1.028e-05 1.37e-05 0.00%
DistributionMapping::Distribute() 3 7.6e-06 9.593e-06 1.347e-05 0.00%
AmrMesh-cluster 0 0 1.516e-06 1.213e-05 0.00%
Castro::computeNewDt() 6 8.528e-06 9.85e-06 1.097e-05 0.00%
Castro::apply_problem_tags() 4 6.253e-06 8.402e-06 1.07e-05 0.00%
Amr::InitializeInit() 1 2.417e-06 3.796e-06 9.776e-06 0.00%
Castro::avgDown() 6 5.617e-06 6.937e-06 7.735e-06 0.00%
BoxList::parallelComplementIn() 8 3.18e-06 4.282e-06 6.273e-06 0.00%
Castro::computeInitialDt() 2 2.936e-06 4.03e-06 5.514e-06 0.00%
BoxList::complementIn 8 3.239e-06 3.703e-06 4.841e-06 0.00%
ClusterList::chop() 0 0 3.139e-07 2.511e-06 0.00%
Amr::init() 1 1.369e-06 2.03e-06 2.449e-06 0.00%
-------------------------------------------------------------------------------------------
-------------------------------------------------------------------------------------------
Name NCalls Incl. Min Incl. Avg Incl. Max Max %
-------------------------------------------------------------------------------------------
main() 1 38.42 38.42 38.43 100.00%
Amr::coarseTimeStep() 5 35.75 35.75 35.75 93.03%
Amr::timeStep() 15 35.75 35.75 35.75 93.03%
Castro::advance() 15 35.54 35.54 35.54 92.49%
Radiation::single_group_update 15 33.45 33.46 33.49 87.16%
RadSolve::levelSolve 98 26.98 27.23 27.32 71.10%
HypreMultiABec::solve 98 12.28 12.33 12.4 32.27%
HypreMultiABec::setupSolver 98 11.51 11.58 11.63 30.27%
FabArray::ParallelCopy() 963 0.9123 1.248 2.202 5.73%
FillPatchIterator::Initialize 258 1.716 1.838 2.172 5.65%
Amr::writePlotFile() 2 2.168 2.168 2.169 5.64%
Amr::init() 1 1.782 1.782 1.783 4.64%
FabArray::ParallelCopy_finish() 963 0.2741 0.6737 1.772 4.61%
FillPatchSingleLevel 308 1.214 1.341 1.732 4.51%
Castro::subcycle_advance_ctu() 15 1.642 1.664 1.701 4.43%
Castro::do_advance_ctu() 15 1.642 1.664 1.701 4.43%
Castro::derive() 144 1.44 1.528 1.572 4.09%
Radiation::compute_eta 98 1.302 1.37 1.404 3.65%
Castro::expand_state() 30 1.056 1.114 1.244 3.24%
HypreMultiABec::finalizeMatrix 98 0.8368 0.9102 1.089 2.83%
HypreMultiABec::clearSolver 98 0.5814 0.9406 1.068 2.78%
Castro::initialize_do_advance() 15 0.9491 1.016 1.038 2.70%
update_rosseland_from_temp 83 0.8118 0.8601 0.9553 2.49%
Radiation::get_planck_and_temp 98 0.761 0.8017 0.8258 2.15%
FabArray::FillBoundary() 181 0.1041 0.2905 0.8146 2.12%
HypreMultiABec::loadMatrix 98 0.7283 0.7753 0.8016 2.09%
FillBoundary_finish() 181 0.04586 0.2369 0.7765 2.02%
RadSolve::levelFlux 98 0.3355 0.4455 0.7524 1.96%
FabArray::ParallelCopy_nowait() 963 0.4017 0.5735 0.6386 1.66%
HypreMultiABec::loadLevelVectors 98 0.5035 0.5231 0.5341 1.39%
RadSolve::levelBCoeffs 98 0.4246 0.4926 0.5228 1.36%
FabArray::setVal() 959 0.4201 0.4725 0.4968 1.29%
Amr::initialInit() 1 0.4817 0.4819 0.4825 1.26%
Radiation::get_rosseland 15 0.3899 0.414 0.4592 1.20%
Castro::clean_state() 88 0.3748 0.4213 0.439 1.14%
RadSolve::levelRhs 98 0.3558 0.3797 0.394 1.03%
Amr::InitializeInit() 1 0.3805 0.388 0.3929 1.02%
Amr::defBaseLevel() 1 0.3805 0.388 0.3929 1.02%
Castro::initialize_advance() 15 0.3145 0.3688 0.3871 1.01%
FluxRegister::Reflux() 156 0.2174 0.2605 0.3824 1.00%
RadSolve::levelFluxReg 98 0.2975 0.3235 0.3808 0.99%
Castro::computeTemp() 106 0.2998 0.3462 0.3632 0.95%
FillPatchTwoLevels 138 0.3089 0.3158 0.3303 0.86%
VisMF::Write(FabArray) 4 0.1948 0.2155 0.2818 0.73%
Radiation::compute_exchange 98 0.2614 0.2742 0.2792 0.73%
Castro::reset_internal_energy(MultiFab) 106 0.2125 0.237 0.244 0.64%
Castro::reset_internal_energy(Fab) 9910 0.2105 0.2346 0.2416 0.63%
Castro::Castro() 5 0.1751 0.1903 0.1993 0.52%
Castro::initData() 3 0.1486 0.156 0.1609 0.42%
Radiation::internal_energy_update 98 0.1211 0.1281 0.1446 0.38%
Castro::post_timestep() 15 0.13 0.13 0.1301 0.34%
RadSolve::levelACoeffs 98 0.07177 0.1137 0.1298 0.34%
Amr::regrid() 3 0.1119 0.1169 0.1208 0.31%
HypreMultiABec::finalizeVectors 98 0.08525 0.09592 0.1142 0.30%
Radiation::get_c_v 10625 0.0924 0.09783 0.103 0.27%
HypreMultiABec::vectorSetBoxValues 5362 0.09256 0.09737 0.1015 0.26%
Amr::FinalizeInit() 1 0.08889 0.09386 0.1012 0.26%
Radiation::scaledGradient 98 0.06554 0.08685 0.09613 0.25%
StateDataPhysBCFunct::() 308 0.07279 0.08462 0.0915 0.24%
StateData::FillBoundary(geom) 1184 0.07207 0.08378 0.09058 0.24%
Castro::normalize_species() 88 0.08135 0.08392 0.08939 0.23%
Radiation:fluxLimiter 98 0.03888 0.07142 0.08668 0.23%
HypreMultiABec::bCoefficients 294 0.04727 0.07281 0.08363 0.22%
Castro::post_regrid() 8 0.06427 0.06949 0.07561 0.20%
AmrLevel::AmrLevel(dm) 5 0.04966 0.05863 0.07387 0.19%
StateData::define() 15 0.04961 0.05859 0.07383 0.19%
Castro::volWgtSum() 36 0.03658 0.04741 0.07332 0.19%
Amr::bldFineLevels() 1 0.0625 0.06552 0.07267 0.19%
Amr::grid_places() 4 0.05949 0.06437 0.07175 0.19%
HypreMultiABec::hmbc 8043 0.06509 0.06945 0.0717 0.19%
AmrMesh::MakeNewGrids() 4 0.05929 0.06416 0.07152 0.19%
FillBoundary_nowait() 181 0.03782 0.05327 0.05928 0.15%
Castro::initMFs() 5 0.05122 0.05461 0.05924 0.15%
HypreMultiABec::hmmat3 1968 0.04973 0.05501 0.05818 0.15%
Castro::errorEst() 4 0.03378 0.04115 0.05529 0.14%
Castro::check_for_nan() 30 0.03277 0.04558 0.05313 0.14%
MultiFab::contains_nan() 30 0.03273 0.04553 0.05308 0.14%
Castro::swap_state_time_levels() 15 0.0476 0.04993 0.0516 0.13%
HypreMultiABec::getSolution 98 0.03062 0.04347 0.04815 0.13%
FabArray::setDomainBndry() 308 0.01882 0.03324 0.04381 0.11%
Castro::enforce_min_density() 88 0.03342 0.03893 0.04298 0.11%
HypreMultiABec::getAbsoluteResidual 98 0.0249 0.02955 0.04242 0.11%
Radiation::getBndryData 15 0.009617 0.02687 0.04137 0.11%
Castro::buildMetrics() 5 0.027 0.03055 0.0349 0.09%
HypreMultiABec::hmac 2681 0.02804 0.03099 0.03218 0.08%
HypreMultiABec::aCoefficients 98 0.01556 0.02785 0.03212 0.08%
HypreMultiABec::vectorGetBoxValues 2681 0.01438 0.02136 0.024 0.06%
HypreMultiABec::boundaryFlux 98 0.01667 0.02162 0.02344 0.06%
TagBoxArray::mapPRD 4 0.00453 0.01181 0.01916 0.05%
Castro::post_init() 2 0.01164 0.01559 0.01717 0.04%
Castro::apply_tagging_restrictions() 4 0.008924 0.009525 0.01128 0.03%
AMRErrorTag::operator() 4 0.007782 0.008719 0.01125 0.03%
FillPatchInterp(Fab) 50 0.0005299 0.00622 0.008935 0.02%
CellConservativeLinear::interp() 38 0.0004773 0.006124 0.008827 0.02%
FabArrayBase::TheFPinfo() 50 0.0005475 0.003769 0.008705 0.02%
FPinfo::FPinfo() 7 0.0004585 0.003685 0.008635 0.02%
DistributionMapping::LeastUsedCPUs() 10 0.0004829 0.003698 0.00861 0.02%
Castro::init(old) 2 0.006466 0.006652 0.006755 0.02%
FabArrayBase::getCPC() 787 0.004475 0.005656 0.006302 0.02%
Castro::finalize_do_advance() 15 0.003086 0.004991 0.006023 0.02%
FabArrayBase::CPC::define() 190 0.003224 0.003661 0.004127 0.01%
Radiation::pre_timestep 15 0.001581 0.002751 0.00322 0.01%
Radiation::init_flux 10 0.001543 0.002709 0.003175 0.01%
Castro::enforce_consistent_e() 3 0.001603 0.00275 0.00315 0.01%
TagBoxArray::collate() 4 0.0003202 0.001585 0.002045 0.01%
Radiation::Regrid 5 0.001756 0.001859 0.002018 0.01%
Castro::build_fine_mask() 18 0.0008072 0.001377 0.001783 0.00%
Castro::finalize_advance() 15 0.000518 0.0006977 0.001578 0.00%
Radiation::filBndry 10 0.001179 0.001322 0.001557 0.00%
OwnerMask() 4 0.0007591 0.0008593 0.001155 0.00%
Castro::avgDown() 6 0.0008453 0.001001 0.001062 0.00%
Castro::avgDown(state_indx) 19 0.0008432 0.0009973 0.00106 0.00%
amrex::average_down_w_geom 19 0.000821 0.0009818 0.001047 0.00%
amrex::average_down 19 0.0008125 0.0009715 0.001034 0.00%
FabSet::linComb() 30 0.0007808 0.0009138 0.001025 0.00%
FabArrayBase::getFB() 181 0.0007881 0.0008469 0.0009142 0.00%
FabArrayBase::FB::FB() 27 0.0006403 0.0006965 0.0007555 0.00%
Amr::InitAmr() 1 0.0005903 0.0006046 0.0006179 0.00%
DistributionMapping::SFCProcessorMapDoIt() 3 0.0001454 0.0001767 0.0002013 0.00%
Radiation::deferred_sync_setup 5 7.633e-05 0.0001189 0.0001544 0.00%
Castro::estTimeStep() 32 3.911e-05 5.755e-05 9.829e-05 0.00%
Castro::enforce_speed_limit() 88 3.857e-05 5.75e-05 6.937e-05 0.00%
RadSolve::levelBndry 15 1.454e-05 2.163e-05 4.009e-05 0.00%
AmrMesh-cluster 0 0 5.008e-06 4.007e-05 0.00%
Amr::writeSmallPlotFile() 1 3.351e-05 3.55e-05 3.742e-05 0.00%
Castro::retry_advance_ctu() 15 1.603e-05 2.213e-05 2.82e-05 0.00%
ClusterList::intersect() 0 0 3.179e-06 2.543e-05 0.00%
Castro::computeNewDt() 6 1.546e-05 1.812e-05 2.069e-05 0.00%
Castro::create_source_corrector() 15 1.223e-05 1.602e-05 1.866e-05 0.00%
Amr::initSubcycle() 1 9.496e-06 1.169e-05 1.556e-05 0.00%
DistributionMapping::Distribute() 3 7.6e-06 9.593e-06 1.347e-05 0.00%
BoxList::parallelComplementIn() 8 6.535e-06 7.985e-06 1.111e-05 0.00%
Castro::apply_problem_tags() 4 6.253e-06 8.402e-06 1.07e-05 0.00%
Castro::computeInitialDt() 2 2.936e-06 4.03e-06 5.514e-06 0.00%
BoxList::complementIn 8 3.239e-06 3.703e-06 4.841e-06 0.00%
ClusterList::chop() 0 0 3.139e-07 2.511e-06 0.00%
-------------------------------------------------------------------------------------------
Unused ParmParse Variables:
[TOP]::castro.gravity(nvals = 1) :: [0]
[TOP]::habec.verbose(nvals = 1) :: [1]
AMReX (22.08-18-g3d29fd7d0e81) finalized