MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-18-g3d29fd7d0e81) initialized Starting run at 05:39:47 UTC on 2022-08-26. Successfully read inputs file ... Castro git describe: 22.08-11-ga978fcf88 AMReX git describe: 22.08-18-g3d29fd7d0 Microphysics git describe: 22.08-4-gb9a0f9aa reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016516609 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.390912814 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.342418902 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.339915117 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.341407152 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.35069342 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.346184705 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338009223 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.338848262 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.33981079 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.337648487 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010545687 seconds Ending run at 05:39:51 UTC on 2022-08-26. Run time = 3.728595869 Run time without initialization = 3.48439963 Average number of zones advanced per microsecond: 0.752 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.728 ... 3.728 ... 3.729 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1066 2.4050 2.5252 67.72% Castro::do_advance_ctu() 10 0.04272 0.1656 0.4673 12.53% Gravity::make_radial_gravity() 21 0.3503 0.3663 0.397 10.65% Castro::initData() 1 0.04959 0.1006 0.162 4.34% Castro::estTimeStep() 21 0.02567 0.0936 0.1456 3.91% FabArray::ParallelCopy_finish() 41 0.03969 0.06159 0.1307 3.51% FabArray::setVal() 143 0.05174 0.06544 0.06911 1.85% Castro::reset_internal_energy(Fab) 1008 0.04567 0.0501 0.05325 1.43% FabArray::ParallelCopy_nowait() 41 0.0268 0.04443 0.05031 1.35% StateData::FillBoundary(geom) 41 0.0339 0.04228 0.04679 1.25% Castro::normalize_species() 62 0.03938 0.04197 0.04321 1.16% FillPatchIterator::Initialize 41 0.02314 0.03589 0.04133 1.11% Gravity::interpolate_monopole_grav() 21 0.02542 0.02727 0.02829 0.76% Castro::construct_new_gravity_source() 10 0.01933 0.02258 0.02344 0.63% Castro::expand_state() 10 0.009813 0.01828 0.02174 0.58% Castro::computeTemp() 63 0.01698 0.01916 0.02056 0.55% Castro::initialize_do_advance() 10 0.009605 0.0174 0.01964 0.53% VisMF::Write(FabArray) 2 0.01282 0.01404 0.01696 0.45% MultiFab::Saxpy() 20 0.008494 0.01435 0.01662 0.45% Amr::writePlotFile() 2 0.01032 0.01308 0.01409 0.38% Gravity::get_new_grav_vector() 11 0.007265 0.01131 0.01273 0.34% MultiFab::contains_nan() 20 0.009765 0.01138 0.01239 0.33% FabArray::setDomainBndry() 41 0.004737 0.01034 0.0123 0.33% Castro::construct_old_gravity_source() 10 0.004942 0.01003 0.01183 0.32% Gravity::get_old_grav_vector() 10 0.005221 0.009122 0.01073 0.29% Castro::initialize_advance() 10 0.003258 0.008786 0.01043 0.28% Castro::initMFs() 1 0.006655 0.008533 0.009954 0.27% StateData::define() 4 0.005552 0.007036 0.008194 0.22% Castro::enforce_min_density() 62 0.005726 0.006681 0.007408 0.20% main() 1 0.006487 0.007068 0.007378 0.20% Castro::construct_new_source() 50 0.004691 0.006478 0.007079 0.19% Castro::swap_state_time_levels() 10 0.0033 0.004534 0.005227 0.14% Amr::coarseTimeStep() 10 0.001138 0.002042 0.004055 0.11% Castro::buildMetrics() 1 0.001567 0.002014 0.00237 0.06% Castro::finalize_do_advance() 10 0.0006628 0.001485 0.001739 0.05% Amr::InitAmr() 1 0.0002919 0.0004074 0.0004962 0.01% Amr::timeStep() 10 0.0001775 0.000242 0.0004746 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002818 0.0003034 0.0003184 0.01% DistributionMapping::LeastUsedCPUs() 1 7.104e-06 0.0001136 0.0002598 0.01% Castro::clean_state() 62 0.000125 0.0001578 0.0001858 0.00% StateDataPhysBCFunct::() 41 0.0001036 0.0001201 0.0001473 0.00% Castro::enforce_consistent_e() 1 7.934e-05 0.0001111 0.0001432 0.00% Castro::construct_old_source() 50 3.033e-05 7.303e-05 9.527e-05 0.00% FabArray::ParallelCopy() 41 6.152e-05 8.177e-05 9.05e-05 0.00% Amr::writeSmallPlotFile() 1 2.567e-05 6.364e-05 8.676e-05 0.00% Castro::subcycle_advance_ctu() 10 2.818e-05 5.172e-05 8.402e-05 0.00% Castro::do_new_sources() 10 4.077e-05 6.74e-05 8.145e-05 0.00% Castro::Castro() 1 5.463e-05 6.869e-05 7.851e-05 0.00% Amr::FinalizeInit() 1 3.888e-06 1.395e-05 7.826e-05 0.00% Castro::do_old_sources() 10 3.566e-05 6.46e-05 7.764e-05 0.00% FillPatchSingleLevel 41 5.697e-05 6.508e-05 6.856e-05 0.00% Amr::defBaseLevel() 1 5.014e-05 5.495e-05 6.419e-05 0.00% Castro::apply_source_to_state() 20 3.344e-05 4.949e-05 6.37e-05 0.00% Castro::construct_old_gravity() 10 3.205e-05 5.136e-05 6.169e-05 0.00% FabArrayBase::getCPC() 41 5.107e-05 5.679e-05 6.137e-05 0.00% Castro::advance() 10 3.074e-05 4.823e-05 5.751e-05 0.00% Castro::finalize_advance() 10 4.657e-05 5.123e-05 5.527e-05 0.00% Castro::construct_new_gravity() 10 3.704e-05 4.648e-05 5.055e-05 0.00% Castro::enforce_speed_limit() 62 2.443e-05 2.823e-05 3.181e-05 0.00% FabArrayBase::CPC::define() 2 2.225e-05 2.466e-05 2.94e-05 0.00% Castro::check_for_nan() 20 1.824e-05 2.275e-05 2.517e-05 0.00% Castro::post_timestep() 10 1.32e-05 1.519e-05 1.692e-05 0.00% Gravity::swapTimeLevels() 10 5.231e-06 1.206e-05 1.553e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.75e-06 1.097e-05 1.491e-05 0.00% Amr::initSubcycle() 1 9.241e-06 1.229e-05 1.472e-05 0.00% Castro::create_source_corrector() 10 6.278e-06 1.024e-05 1.405e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.035e-06 5.593e-06 1.227e-05 0.00% Castro::computeNewDt() 9 7.339e-06 9.241e-06 1.217e-05 0.00% Gravity::set_mass_offset() 10 6.344e-06 9.124e-06 1.108e-05 0.00% Castro::FluxRegCrseInit 10 5.069e-06 7.285e-06 1.037e-05 0.00% Amr::init() 1 1.763e-06 2.941e-06 8.59e-06 0.00% Amr::InitializeInit() 1 2.388e-06 4.565e-06 7.934e-06 0.00% Castro::retry_advance_ctu() 10 4.05e-06 5.954e-06 7.683e-06 0.00% Castro::post_init() 1 3.443e-06 4.046e-06 5.46e-06 0.00% Castro::computeInitialDt() 2 3.226e-06 4.037e-06 4.844e-06 0.00% Castro::post_regrid() 1 1.971e-06 3.26e-06 4.667e-06 0.00% Castro::FluxRegFineAdd() 10 1.931e-06 2.298e-06 2.543e-06 0.00% Amr::initialInit() 1 1.411e-06 1.717e-06 2.159e-06 0.00% DistributionMapping::Distribute() 1 8.8e-07 1.179e-06 1.43e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.728 3.728 3.729 100.00% Amr::coarseTimeStep() 10 3.467 3.467 3.467 92.97% Amr::timeStep() 10 3.454 3.456 3.457 92.72% Castro::advance() 10 3.44 3.44 3.441 92.28% Castro::subcycle_advance_ctu() 10 3.368 3.373 3.387 90.85% Castro::do_advance_ctu() 10 3.368 3.373 3.387 90.84% Castro::construct_ctu_hydro_source() 10 2.107 2.405 2.525 67.72% Gravity::make_radial_gravity() 21 0.3503 0.3663 0.397 10.65% Amr::init() 1 0.2435 0.2436 0.2438 6.54% Gravity::get_new_grav_vector() 11 0.239 0.2413 0.2433 6.53% Castro::construct_old_gravity() 10 0.2018 0.2153 0.239 6.41% Gravity::get_old_grav_vector() 10 0.2008 0.2145 0.2385 6.40% Amr::initialInit() 1 0.2269 0.2271 0.2275 6.10% FillPatchIterator::Initialize 41 0.1857 0.1949 0.2212 5.93% Castro::construct_new_gravity() 10 0.206 0.2083 0.2094 5.62% FillPatchSingleLevel 41 0.1349 0.1486 0.1934 5.19% Amr::InitializeInit() 1 0.07093 0.1248 0.1901 5.10% Amr::defBaseLevel() 1 0.07093 0.1248 0.1901 5.10% Castro::initialize_do_advance() 10 0.1657 0.1764 0.1837 4.93% Castro::initData() 1 0.05361 0.1051 0.1672 4.48% FabArray::ParallelCopy() 41 0.09017 0.1062 0.1577 4.23% Amr::FinalizeInit() 1 0.03681 0.1024 0.156 4.18% Castro::estTimeStep() 21 0.02567 0.0936 0.1456 3.91% Castro::expand_state() 10 0.1213 0.1287 0.1329 3.56% FabArray::ParallelCopy_finish() 41 0.03969 0.06159 0.1307 3.51% Castro::clean_state() 62 0.107 0.1172 0.1232 3.30% Castro::computeInitialDt() 2 0.002106 0.06755 0.1213 3.25% Castro::computeTemp() 63 0.06295 0.06957 0.0739 1.98% Castro::initialize_advance() 10 0.05227 0.06777 0.07248 1.94% FabArray::setVal() 143 0.05174 0.06544 0.06911 1.85% Castro::do_new_sources() 10 0.05206 0.06264 0.06503 1.74% Castro::reset_internal_energy(MultiFab) 63 0.04597 0.0504 0.05356 1.44% Castro::reset_internal_energy(Fab) 1008 0.04567 0.0501 0.05325 1.43% FabArray::ParallelCopy_nowait() 41 0.02687 0.04452 0.05039 1.35% Castro::do_old_sources() 10 0.03191 0.04507 0.04904 1.32% StateDataPhysBCFunct::() 41 0.034 0.0424 0.04691 1.26% StateData::FillBoundary(geom) 41 0.0339 0.04228 0.04679 1.25% Castro::normalize_species() 62 0.03938 0.04197 0.04321 1.16% Castro::post_init() 1 0.03278 0.0338 0.0345 0.93% Castro::construct_new_source() 50 0.02402 0.02906 0.03043 0.82% Gravity::interpolate_monopole_grav() 21 0.02542 0.02727 0.02829 0.76% Amr::writePlotFile() 2 0.02684 0.02712 0.02741 0.74% Castro::construct_new_gravity_source() 10 0.01933 0.02258 0.02344 0.63% VisMF::Write(FabArray) 2 0.01282 0.01404 0.01696 0.45% Castro::apply_source_to_state() 20 0.008528 0.0144 0.01667 0.45% MultiFab::Saxpy() 20 0.008494 0.01435 0.01662 0.45% Castro::post_timestep() 10 0.01456 0.0157 0.01658 0.44% Castro::Castro() 1 0.009709 0.01242 0.01462 0.39% Castro::check_for_nan() 20 0.009786 0.0114 0.01241 0.33% MultiFab::contains_nan() 20 0.009765 0.01138 0.01239 0.33% FabArray::setDomainBndry() 41 0.004737 0.01034 0.0123 0.33% Castro::construct_old_source() 50 0.004973 0.01011 0.01192 0.32% Castro::construct_old_gravity_source() 10 0.004942 0.01003 0.01183 0.32% Castro::initMFs() 1 0.006655 0.008533 0.009954 0.27% AmrLevel::AmrLevel(dm) 1 0.00556 0.007047 0.008209 0.22% StateData::define() 4 0.005552 0.007036 0.008194 0.22% Castro::enforce_min_density() 62 0.005726 0.006681 0.007408 0.20% Castro::computeNewDt() 9 0.007062 0.007083 0.0071 0.19% Castro::swap_state_time_levels() 10 0.0033 0.004534 0.005227 0.14% Castro::post_regrid() 1 0.001518 0.001992 0.002942 0.08% Castro::buildMetrics() 1 0.00168 0.002184 0.002588 0.07% Castro::finalize_do_advance() 10 0.0006628 0.001485 0.001739 0.05% Amr::InitAmr() 1 0.0003013 0.0004197 0.0005102 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.278e-05 0.0001204 0.0002731 0.01% DistributionMapping::LeastUsedCPUs() 1 7.104e-06 0.0001136 0.0002598 0.01% Castro::enforce_consistent_e() 1 7.934e-05 0.0001111 0.0001432 0.00% FabArrayBase::getCPC() 41 7.508e-05 8.145e-05 8.925e-05 0.00% Amr::writeSmallPlotFile() 1 2.567e-05 6.364e-05 8.676e-05 0.00% Castro::finalize_advance() 10 5.383e-05 6.081e-05 6.625e-05 0.00% Castro::enforce_speed_limit() 62 2.443e-05 2.823e-05 3.181e-05 0.00% FabArrayBase::CPC::define() 2 2.225e-05 2.466e-05 2.94e-05 0.00% Gravity::swapTimeLevels() 10 5.231e-06 1.206e-05 1.553e-05 0.00% Amr::initSubcycle() 1 9.241e-06 1.229e-05 1.472e-05 0.00% Castro::create_source_corrector() 10 6.278e-06 1.024e-05 1.405e-05 0.00% Gravity::set_mass_offset() 10 6.344e-06 9.124e-06 1.108e-05 0.00% Castro::FluxRegCrseInit 10 5.069e-06 7.285e-06 1.037e-05 0.00% Castro::retry_advance_ctu() 10 4.05e-06 5.954e-06 7.683e-06 0.00% Castro::FluxRegFineAdd() 10 1.931e-06 2.298e-06 2.543e-06 0.00% DistributionMapping::Distribute() 1 8.8e-07 1.179e-06 1.43e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-18-g3d29fd7d0e81) finalized