MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-18-g3d29fd7d0e81) initialized Starting run at 19:15:20 UTC on 2022-08-29. Successfully read inputs file ... Castro git describe: 22.08-14-g229ea0b73 AMReX git describe: 22.08-18-g3d29fd7d0 Microphysics git describe: 22.08-6-ge3a6cb11 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... hydro CFL timestep constrained at (i,j,k) = (31,31,31) INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015454272 seconds hydro CFL timestep constrained at (i,j,k) = (31,31,31) [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 hydro CFL timestep constrained at (i,j,k) = (31,31,31) [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.35471979 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 hydro CFL timestep constrained at (i,j,k) = (31,31,31) [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.344843549 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 hydro CFL timestep constrained at (i,j,k) = (31,31,30) [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.343356851 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 hydro CFL timestep constrained at (i,j,k) = (31,31,30) [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.343154159 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 hydro CFL timestep constrained at (i,j,k) = (30,31,31) [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.352016512 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 hydro CFL timestep constrained at (i,j,k) = (30,31,31) [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 hydro CFL timestep constrained at (i,j,k) = (31,31,30) [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.350361102 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 hydro CFL timestep constrained at (i,j,k) = (31,31,30) [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 hydro CFL timestep constrained at (i,j,k) = (30,31,31) [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.341047005 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 hydro CFL timestep constrained at (i,j,k) = (30,31,31) [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339249645 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.338708382 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,31) [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 hydro CFL timestep constrained at (i,j,k) = (31,30,30) [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339438532 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010658978 seconds Ending run at 19:15:23 UTC on 2022-08-29. Run time = 3.662954886 Run time without initialization = 3.465526977 Average number of zones advanced per microsecond: 0.756 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.66 ... 3.662 ... 3.663 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0827 2.4033 2.5177 68.73% Castro::do_advance_ctu() 10 0.02971 0.1441 0.4672 12.75% Gravity::make_radial_gravity() 21 0.3353 0.3496 0.379 10.35% Castro::initData() 1 0.03905 0.08068 0.1305 3.56% FabArray::ParallelCopy_finish() 41 0.04542 0.06374 0.1278 3.49% Castro::estTimeStep() 21 0.03106 0.08394 0.1244 3.40% FabArray::setVal() 143 0.05962 0.06887 0.07142 1.95% Castro::reset_internal_energy(Fab) 1008 0.04568 0.05017 0.05221 1.43% FabArray::ParallelCopy_nowait() 41 0.02711 0.0446 0.0502 1.37% StateData::FillBoundary(geom) 41 0.03593 0.04223 0.04685 1.28% Castro::normalize_species() 62 0.03894 0.04113 0.04219 1.15% FillPatchIterator::Initialize 41 0.02343 0.03569 0.03985 1.09% Gravity::interpolate_monopole_grav() 21 0.02584 0.02731 0.02782 0.76% Castro::construct_new_gravity_source() 10 0.02033 0.02306 0.02396 0.65% Castro::expand_state() 10 0.009765 0.01922 0.02263 0.62% Castro::computeTemp() 63 0.01726 0.01913 0.01988 0.54% Castro::initialize_do_advance() 10 0.009377 0.01729 0.01944 0.53% MultiFab::Saxpy() 20 0.008685 0.0144 0.01617 0.44% VisMF::Write(FabArray) 2 0.01254 0.01353 0.01609 0.44% Amr::writePlotFile() 2 0.01025 0.01294 0.01422 0.39% Gravity::get_new_grav_vector() 11 0.007477 0.01151 0.01284 0.35% FabArray::setDomainBndry() 41 0.004907 0.0105 0.01266 0.35% MultiFab::contains_nan() 20 0.009361 0.01099 0.01237 0.34% Castro::construct_old_gravity_source() 10 0.004941 0.01007 0.01181 0.32% Castro::initialize_advance() 10 0.006495 0.01 0.0109 0.30% Gravity::get_old_grav_vector() 10 0.005284 0.009305 0.01071 0.29% Castro::initMFs() 1 0.006646 0.007155 0.007987 0.22% main() 1 0.004254 0.006785 0.007344 0.20% Castro::construct_new_source() 50 0.004782 0.006531 0.007115 0.19% Castro::enforce_min_density() 62 0.005785 0.006692 0.007081 0.19% StateData::define() 4 0.005587 0.005858 0.006287 0.17% Castro::swap_state_time_levels() 10 0.003205 0.004236 0.004584 0.13% Amr::coarseTimeStep() 10 0.0009857 0.001783 0.003981 0.11% Castro::finalize_do_advance() 10 0.0006379 0.001654 0.002006 0.05% Castro::buildMetrics() 1 0.001603 0.001689 0.00184 0.05% Amr::InitAmr() 1 0.0002645 0.0003502 0.0006715 0.02% DistributionMapping::LeastUsedCPUs() 1 1.163e-05 0.0004567 0.0005604 0.02% Castro::reset_internal_energy(MultiFab) 63 0.0002777 0.0002932 0.000301 0.01% Amr::timeStep() 10 0.0001673 0.000205 0.0002355 0.01% Castro::clean_state() 62 0.0001274 0.0001646 0.0001923 0.01% StateDataPhysBCFunct::() 41 9.49e-05 0.0001265 0.0001505 0.00% Castro::enforce_consistent_e() 1 7.328e-05 8.73e-05 0.000101 0.00% FabArray::ParallelCopy() 41 5.397e-05 7.856e-05 9.48e-05 0.00% Castro::construct_old_source() 50 2.947e-05 7.284e-05 9.386e-05 0.00% Castro::Castro() 1 5.667e-05 7.09e-05 9.273e-05 0.00% Castro::do_old_sources() 10 3.817e-05 6.776e-05 8.48e-05 0.00% Castro::do_new_sources() 10 3.941e-05 6.85e-05 8.023e-05 0.00% Amr::FinalizeInit() 1 3.249e-06 1.399e-05 7.462e-05 0.00% Castro::construct_old_gravity() 10 4.058e-05 5.447e-05 7.369e-05 0.00% FillPatchSingleLevel 41 4.863e-05 6.128e-05 6.806e-05 0.00% Amr::writeSmallPlotFile() 1 2.624e-05 4.75e-05 6.571e-05 0.00% Castro::apply_source_to_state() 20 2.877e-05 4.924e-05 6.245e-05 0.00% FabArrayBase::getCPC() 41 3.759e-05 5.521e-05 6.227e-05 0.00% Castro::finalize_advance() 10 4.889e-05 5.361e-05 5.762e-05 0.00% Castro::subcycle_advance_ctu() 10 3.333e-05 4.532e-05 5.584e-05 0.00% Castro::construct_new_gravity() 10 3.326e-05 4.448e-05 5.094e-05 0.00% Amr::defBaseLevel() 1 3.189e-05 4.015e-05 5.03e-05 0.00% Castro::advance() 10 2.95e-05 4.211e-05 4.939e-05 0.00% Castro::enforce_speed_limit() 62 2.181e-05 2.754e-05 3.127e-05 0.00% FabArrayBase::CPC::define() 2 2.169e-05 2.424e-05 3.06e-05 0.00% Castro::check_for_nan() 20 1.758e-05 2.331e-05 2.627e-05 0.00% Amr::initSubcycle() 1 8.124e-06 1.057e-05 2.29e-05 0.00% Castro::post_timestep() 10 1.251e-05 1.459e-05 1.599e-05 0.00% Gravity::swapTimeLevels() 10 6.585e-06 1.233e-05 1.575e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.227e-06 1.04e-05 1.331e-05 0.00% Castro::create_source_corrector() 10 6.06e-06 1.062e-05 1.27e-05 0.00% Castro::computeNewDt() 9 7.432e-06 9.798e-06 1.192e-05 0.00% Gravity::set_mass_offset() 10 6.206e-06 9.207e-06 1.142e-05 0.00% Castro::FluxRegCrseInit 10 4.956e-06 8.391e-06 1.096e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.627e-06 5.259e-06 8.666e-06 0.00% Castro::retry_advance_ctu() 10 4.353e-06 5.707e-06 6.929e-06 0.00% Amr::InitializeInit() 1 2.024e-06 3.519e-06 6.362e-06 0.00% Castro::computeInitialDt() 2 2.882e-06 4.027e-06 4.902e-06 0.00% Castro::post_init() 1 2.526e-06 3.732e-06 4.82e-06 0.00% Castro::post_regrid() 1 1.727e-06 3.149e-06 4.276e-06 0.00% Amr::init() 1 1.731e-06 2.018e-06 2.645e-06 0.00% DistributionMapping::Distribute() 1 9.24e-07 1.266e-06 2.482e-06 0.00% Castro::FluxRegFineAdd() 10 1.693e-06 2.21e-06 2.443e-06 0.00% Amr::initialInit() 1 1.228e-06 1.595e-06 2.007e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.66 3.662 3.663 100.00% Amr::coarseTimeStep() 10 3.448 3.448 3.448 94.12% Amr::timeStep() 10 3.433 3.436 3.436 93.81% Castro::advance() 10 3.418 3.419 3.42 93.35% Castro::subcycle_advance_ctu() 10 3.346 3.348 3.356 91.63% Castro::do_advance_ctu() 10 3.346 3.348 3.356 91.63% Castro::construct_ctu_hydro_source() 10 2.083 2.403 2.518 68.73% Gravity::make_radial_gravity() 21 0.3353 0.3496 0.379 10.35% Castro::construct_old_gravity() 10 0.1987 0.2107 0.2326 6.35% Gravity::get_old_grav_vector() 10 0.1978 0.2099 0.2321 6.33% Gravity::get_new_grav_vector() 11 0.2251 0.2291 0.2307 6.30% FillPatchIterator::Initialize 41 0.1896 0.1971 0.2194 5.99% Castro::construct_new_gravity() 10 0.2005 0.2042 0.2055 5.61% Amr::init() 1 0.1965 0.1969 0.197 5.38% FillPatchSingleLevel 41 0.1378 0.1509 0.1911 5.22% Castro::initialize_do_advance() 10 0.1668 0.1795 0.1872 5.11% Amr::initialInit() 1 0.1805 0.1812 0.1814 4.95% FabArray::ParallelCopy() 41 0.09435 0.1085 0.155 4.23% Amr::InitializeInit() 1 0.05995 0.1022 0.1525 4.16% Amr::defBaseLevel() 1 0.05995 0.1022 0.1525 4.16% Castro::expand_state() 10 0.1234 0.132 0.1373 3.75% Castro::initData() 1 0.04309 0.08466 0.1342 3.66% FabArray::ParallelCopy_finish() 41 0.04542 0.06374 0.1278 3.49% Castro::estTimeStep() 21 0.03106 0.08394 0.1244 3.40% Amr::FinalizeInit() 1 0.02801 0.079 0.1214 3.31% Castro::clean_state() 62 0.1072 0.1167 0.1202 3.28% Castro::computeInitialDt() 2 0.002074 0.05283 0.09517 2.60% Castro::initialize_advance() 10 0.06179 0.07092 0.07342 2.00% Castro::computeTemp() 63 0.06323 0.06959 0.0721 1.97% FabArray::setVal() 143 0.05962 0.06887 0.07142 1.95% Castro::do_new_sources() 10 0.05435 0.06351 0.06518 1.78% Castro::reset_internal_energy(MultiFab) 63 0.04598 0.05046 0.0525 1.43% Castro::reset_internal_energy(Fab) 1008 0.04568 0.05017 0.05221 1.43% FabArray::ParallelCopy_nowait() 41 0.02719 0.04468 0.05028 1.37% Castro::do_old_sources() 10 0.03198 0.04514 0.04918 1.34% StateDataPhysBCFunct::() 41 0.03603 0.04236 0.047 1.28% StateData::FillBoundary(geom) 41 0.03593 0.04223 0.04685 1.28% Castro::normalize_species() 62 0.03894 0.04113 0.04219 1.15% Castro::construct_new_source() 50 0.02511 0.02959 0.0309 0.84% Gravity::interpolate_monopole_grav() 21 0.02584 0.02731 0.02782 0.76% Amr::writePlotFile() 2 0.02628 0.02647 0.02676 0.73% Castro::post_init() 1 0.02542 0.02566 0.02591 0.71% Castro::construct_new_gravity_source() 10 0.02033 0.02306 0.02396 0.65% Castro::post_timestep() 10 0.01477 0.01609 0.01667 0.46% Castro::apply_source_to_state() 20 0.008719 0.01445 0.01623 0.44% MultiFab::Saxpy() 20 0.008685 0.0144 0.01617 0.44% VisMF::Write(FabArray) 2 0.01254 0.01353 0.01609 0.44% FabArray::setDomainBndry() 41 0.004907 0.0105 0.01266 0.35% Castro::check_for_nan() 20 0.009378 0.01102 0.0124 0.34% MultiFab::contains_nan() 20 0.009361 0.01099 0.01237 0.34% Castro::Castro() 1 0.01061 0.01115 0.01198 0.33% Castro::construct_old_source() 50 0.00497 0.01015 0.0119 0.32% Castro::construct_old_gravity_source() 10 0.004941 0.01007 0.01181 0.32% Castro::computeNewDt() 9 0.009167 0.009176 0.009188 0.25% Castro::initMFs() 1 0.006646 0.007155 0.007987 0.22% Castro::enforce_min_density() 62 0.005785 0.006692 0.007081 0.19% AmrLevel::AmrLevel(dm) 1 0.005599 0.005868 0.0063 0.17% StateData::define() 4 0.005587 0.005858 0.006287 0.17% Castro::swap_state_time_levels() 10 0.003205 0.004236 0.004584 0.13% Castro::finalize_do_advance() 10 0.0006379 0.001654 0.002006 0.05% Castro::buildMetrics() 1 0.001726 0.00182 0.001977 0.05% Castro::post_regrid() 1 0.001523 0.001594 0.001645 0.04% Amr::InitAmr() 1 0.0002732 0.0003607 0.0006944 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 2.278e-05 0.0004632 0.0005684 0.02% DistributionMapping::LeastUsedCPUs() 1 1.163e-05 0.0004567 0.0005604 0.02% Castro::enforce_consistent_e() 1 7.328e-05 8.73e-05 0.000101 0.00% FabArrayBase::getCPC() 41 6.234e-05 7.945e-05 9.219e-05 0.00% Castro::finalize_advance() 10 5.554e-05 6.421e-05 7.041e-05 0.00% Amr::writeSmallPlotFile() 1 2.624e-05 4.75e-05 6.571e-05 0.00% Castro::enforce_speed_limit() 62 2.181e-05 2.754e-05 3.127e-05 0.00% FabArrayBase::CPC::define() 2 2.169e-05 2.424e-05 3.06e-05 0.00% Amr::initSubcycle() 1 8.124e-06 1.057e-05 2.29e-05 0.00% Gravity::swapTimeLevels() 10 6.585e-06 1.233e-05 1.575e-05 0.00% Castro::create_source_corrector() 10 6.06e-06 1.062e-05 1.27e-05 0.00% Gravity::set_mass_offset() 10 6.206e-06 9.207e-06 1.142e-05 0.00% Castro::FluxRegCrseInit 10 4.956e-06 8.391e-06 1.096e-05 0.00% Castro::retry_advance_ctu() 10 4.353e-06 5.707e-06 6.929e-06 0.00% DistributionMapping::Distribute() 1 9.24e-07 1.266e-06 2.482e-06 0.00% Castro::FluxRegFineAdd() 10 1.693e-06 2.21e-06 2.443e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-18-g3d29fd7d0e81) finalized