MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-19-gacc223f99182) initialized Starting run at 05:39:18 UTC on 2022-08-31. Successfully read inputs file ... Castro git describe: 22.08-11-ga978fcf88 AMReX git describe: 22.08-19-gacc223f99 Microphysics git describe: 22.08-6-ge3a6cb11 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016411247 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.349621748 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.344154774 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.343145225 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342905224 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.352953503 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.352205503 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.340476939 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.340175793 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.339101074 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.34350662 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010487521 seconds Ending run at 05:39:22 UTC on 2022-08-31. Run time = 3.706719934 Run time without initialization = 3.466349339 Average number of zones advanced per microsecond: 0.756 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.704 ... 3.706 ... 3.707 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1142 2.4235 2.5204 67.99% Castro::do_advance_ctu() 10 0.0315 0.1304 0.443 11.95% Gravity::make_radial_gravity() 21 0.3405 0.3565 0.3831 10.33% Castro::initData() 1 0.03944 0.09198 0.1628 4.39% Castro::estTimeStep() 21 0.02904 0.1062 0.1605 4.33% FabArray::ParallelCopy_finish() 41 0.04192 0.062 0.1262 3.41% FabArray::setVal() 143 0.05628 0.06728 0.06989 1.89% Castro::reset_internal_energy(Fab) 1008 0.04772 0.05032 0.05257 1.42% FabArray::ParallelCopy_nowait() 41 0.02752 0.04479 0.05021 1.35% StateData::FillBoundary(geom) 41 0.03546 0.04199 0.04613 1.24% Castro::normalize_species() 62 0.04152 0.04202 0.04268 1.15% FillPatchIterator::Initialize 41 0.02451 0.03614 0.04013 1.08% Gravity::interpolate_monopole_grav() 21 0.02707 0.02753 0.02778 0.75% Castro::construct_new_gravity_source() 10 0.02025 0.023 0.02443 0.66% Castro::expand_state() 10 0.009778 0.019 0.0226 0.61% Castro::computeTemp() 63 0.01822 0.01897 0.02052 0.55% Castro::initialize_do_advance() 10 0.01008 0.01733 0.01903 0.51% VisMF::Write(FabArray) 2 0.01291 0.0138 0.01874 0.51% MultiFab::Saxpy() 20 0.008584 0.0142 0.01619 0.44% Amr::writePlotFile() 2 0.008372 0.01343 0.0145 0.39% Gravity::get_new_grav_vector() 11 0.007557 0.01139 0.01287 0.35% MultiFab::contains_nan() 20 0.009401 0.01085 0.01268 0.34% FabArray::setDomainBndry() 41 0.004801 0.01026 0.01231 0.33% Castro::construct_old_gravity_source() 10 0.004914 0.009992 0.01163 0.31% Gravity::get_old_grav_vector() 10 0.005555 0.009454 0.01092 0.29% Castro::initialize_advance() 10 0.003244 0.008758 0.01047 0.28% Castro::initMFs() 1 0.006621 0.007811 0.01014 0.27% StateData::define() 4 0.005608 0.006467 0.008243 0.22% Castro::construct_new_source() 50 0.004837 0.006508 0.007126 0.19% main() 1 0.004499 0.006372 0.006837 0.18% Castro::enforce_min_density() 62 0.005315 0.006081 0.006774 0.18% Castro::swap_state_time_levels() 10 0.002608 0.004472 0.005248 0.14% Castro::buildMetrics() 1 0.001548 0.001814 0.002356 0.06% Amr::coarseTimeStep() 10 0.001265 0.001726 0.002301 0.06% Castro::finalize_do_advance() 10 0.000651 0.001408 0.001638 0.04% Amr::timeStep() 10 0.000183 0.000252 0.0005166 0.01% Amr::InitAmr() 1 0.0002723 0.000351 0.0004884 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002886 0.0003064 0.000324 0.01% DistributionMapping::LeastUsedCPUs() 1 7.928e-06 0.0001718 0.00026 0.01% Castro::clean_state() 62 0.0001445 0.0001593 0.0001722 0.00% Castro::enforce_consistent_e() 1 7.566e-05 0.0001008 0.0001493 0.00% StateDataPhysBCFunct::() 41 0.0001011 0.0001313 0.0001456 0.00% FabArray::ParallelCopy() 41 7.445e-05 8.621e-05 9.036e-05 0.00% Castro::construct_old_source() 50 3.707e-05 7.234e-05 8.968e-05 0.00% Castro::do_new_sources() 10 4.449e-05 6.937e-05 8.672e-05 0.00% Castro::do_old_sources() 10 4.816e-05 6.977e-05 8.438e-05 0.00% Amr::FinalizeInit() 1 4.319e-06 1.472e-05 8.201e-05 0.00% Castro::Castro() 1 5.393e-05 6.253e-05 8.134e-05 0.00% FillPatchSingleLevel 41 6.298e-05 6.894e-05 7.485e-05 0.00% Amr::writeSmallPlotFile() 1 4.018e-05 6.203e-05 7.392e-05 0.00% Castro::advance() 10 3.405e-05 4.973e-05 7.212e-05 0.00% Castro::construct_old_gravity() 10 3.892e-05 5.572e-05 7.01e-05 0.00% Castro::subcycle_advance_ctu() 10 3.534e-05 5.296e-05 6.85e-05 0.00% Castro::apply_source_to_state() 20 3.649e-05 4.935e-05 6.201e-05 0.00% Castro::finalize_advance() 10 5.304e-05 5.605e-05 5.879e-05 0.00% FabArrayBase::getCPC() 41 4.968e-05 5.211e-05 5.547e-05 0.00% Castro::construct_new_gravity() 10 4.094e-05 4.656e-05 4.902e-05 0.00% Amr::defBaseLevel() 1 3.476e-05 3.947e-05 4.889e-05 0.00% Castro::enforce_speed_limit() 62 2.435e-05 2.821e-05 3.437e-05 0.00% FabArrayBase::CPC::define() 2 2.202e-05 2.504e-05 3.194e-05 0.00% Castro::check_for_nan() 20 1.709e-05 2.384e-05 3.048e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.087e-06 1.055e-05 1.974e-05 0.00% Castro::post_timestep() 10 1.438e-05 1.579e-05 1.705e-05 0.00% Gravity::swapTimeLevels() 10 7.07e-06 1.349e-05 1.662e-05 0.00% Castro::create_source_corrector() 10 5.87e-06 9.85e-06 1.432e-05 0.00% Amr::initSubcycle() 1 8.353e-06 1.035e-05 1.426e-05 0.00% Castro::computeNewDt() 9 7.231e-06 9.004e-06 1.057e-05 0.00% Castro::FluxRegCrseInit 10 5.554e-06 7.939e-06 1.008e-05 0.00% Gravity::set_mass_offset() 10 6.354e-06 8.73e-06 1.007e-05 0.00% Amr::InitializeInit() 1 2.564e-06 4.553e-06 7.627e-06 0.00% Castro::retry_advance_ctu() 10 4.538e-06 5.811e-06 7.559e-06 0.00% Castro::post_init() 1 2.47e-06 4.105e-06 6.919e-06 0.00% Castro::post_regrid() 1 1.923e-06 3.518e-06 6.525e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.735e-06 4.259e-06 5.29e-06 0.00% Castro::computeInitialDt() 2 3.812e-06 4.241e-06 4.935e-06 0.00% Castro::FluxRegFineAdd() 10 1.963e-06 2.445e-06 3.052e-06 0.00% Amr::init() 1 1.716e-06 1.946e-06 2.165e-06 0.00% Amr::initialInit() 1 1.312e-06 1.704e-06 2.032e-06 0.00% DistributionMapping::Distribute() 1 9.23e-07 1.098e-06 1.318e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.704 3.706 3.707 100.00% Amr::coarseTimeStep() 10 3.449 3.449 3.449 93.05% Amr::timeStep() 10 3.439 3.439 3.44 92.80% Castro::advance() 10 3.422 3.423 3.423 92.36% Castro::subcycle_advance_ctu() 10 3.351 3.354 3.366 90.80% Castro::do_advance_ctu() 10 3.351 3.354 3.366 90.80% Castro::construct_ctu_hydro_source() 10 2.114 2.424 2.52 67.99% Gravity::make_radial_gravity() 21 0.3405 0.3565 0.3831 10.33% Amr::init() 1 0.2397 0.2399 0.24 6.47% Gravity::get_new_grav_vector() 11 0.2278 0.2323 0.2343 6.32% Castro::construct_old_gravity() 10 0.2003 0.2139 0.234 6.31% Gravity::get_old_grav_vector() 10 0.1994 0.2131 0.2335 6.30% Amr::initialInit() 1 0.2229 0.2232 0.2233 6.03% FillPatchIterator::Initialize 41 0.1849 0.1955 0.2189 5.90% Castro::construct_new_gravity() 10 0.2006 0.2037 0.2052 5.54% Amr::InitializeInit() 1 0.05937 0.1145 0.1906 5.14% Amr::defBaseLevel() 1 0.05937 0.1145 0.1906 5.14% FillPatchSingleLevel 41 0.1336 0.1491 0.1896 5.11% Castro::initialize_do_advance() 10 0.1649 0.1789 0.1867 5.04% Castro::initData() 1 0.0432 0.09626 0.168 4.53% Amr::FinalizeInit() 1 0.03266 0.1087 0.1638 4.42% Castro::estTimeStep() 21 0.02904 0.1062 0.1605 4.33% FabArray::ParallelCopy() 41 0.09061 0.107 0.1539 4.15% Castro::expand_state() 10 0.1199 0.1315 0.137 3.70% Castro::computeInitialDt() 2 0.001973 0.07827 0.1335 3.60% FabArray::ParallelCopy_finish() 41 0.04192 0.062 0.1262 3.41% Castro::clean_state() 62 0.1126 0.1168 0.1205 3.25% Castro::computeTemp() 63 0.06626 0.0696 0.07341 1.98% Castro::initialize_advance() 10 0.05641 0.06898 0.0719 1.94% FabArray::setVal() 143 0.05628 0.06728 0.06989 1.89% Castro::do_new_sources() 10 0.05394 0.06309 0.06551 1.77% Castro::reset_internal_energy(MultiFab) 63 0.04804 0.05062 0.05289 1.43% Castro::reset_internal_energy(Fab) 1008 0.04772 0.05032 0.05257 1.42% FabArray::ParallelCopy_nowait() 41 0.0276 0.04487 0.05029 1.36% Castro::do_old_sources() 10 0.03228 0.04496 0.04896 1.32% StateDataPhysBCFunct::() 41 0.03558 0.04212 0.04627 1.25% StateData::FillBoundary(geom) 41 0.03546 0.04199 0.04613 1.24% Castro::normalize_species() 62 0.04152 0.04202 0.04268 1.15% Castro::construct_new_source() 50 0.02509 0.0295 0.03083 0.83% Castro::post_init() 1 0.02874 0.02942 0.02983 0.80% Gravity::interpolate_monopole_grav() 21 0.02707 0.02753 0.02778 0.75% Amr::writePlotFile() 2 0.02699 0.02723 0.02743 0.74% Castro::construct_new_gravity_source() 10 0.02025 0.023 0.02443 0.66% VisMF::Write(FabArray) 2 0.01291 0.0138 0.01874 0.51% Castro::post_timestep() 10 0.01542 0.01595 0.0165 0.45% Castro::apply_source_to_state() 20 0.008624 0.01425 0.01625 0.44% MultiFab::Saxpy() 20 0.008584 0.0142 0.01619 0.44% Castro::Castro() 1 0.0102 0.01153 0.01434 0.39% Castro::check_for_nan() 20 0.009423 0.01087 0.01271 0.34% MultiFab::contains_nan() 20 0.009401 0.01085 0.01268 0.34% FabArray::setDomainBndry() 41 0.004801 0.01026 0.01231 0.33% Castro::construct_old_source() 50 0.004951 0.01006 0.01172 0.32% Castro::construct_old_gravity_source() 10 0.004914 0.009992 0.01163 0.31% Castro::initMFs() 1 0.006621 0.007811 0.01014 0.27% AmrLevel::AmrLevel(dm) 1 0.005617 0.006477 0.008257 0.22% StateData::define() 4 0.005608 0.006467 0.008243 0.22% Castro::computeNewDt() 9 0.007046 0.007061 0.00707 0.19% Castro::enforce_min_density() 62 0.005315 0.006081 0.006774 0.18% Castro::swap_state_time_levels() 10 0.002608 0.004472 0.005248 0.14% Castro::post_regrid() 1 0.001508 0.00188 0.002819 0.08% Castro::buildMetrics() 1 0.001664 0.001959 0.002571 0.07% Castro::finalize_do_advance() 10 0.000651 0.001408 0.001638 0.04% Amr::InitAmr() 1 0.0002816 0.0003613 0.0005024 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.342e-05 0.0001771 0.0002656 0.01% DistributionMapping::LeastUsedCPUs() 1 7.928e-06 0.0001718 0.00026 0.01% Castro::enforce_consistent_e() 1 7.566e-05 0.0001008 0.0001493 0.00% FabArrayBase::getCPC() 41 7.17e-05 7.715e-05 8.431e-05 0.00% Amr::writeSmallPlotFile() 1 4.018e-05 6.203e-05 7.392e-05 0.00% Castro::finalize_advance() 10 6.098e-05 6.643e-05 7.097e-05 0.00% Castro::enforce_speed_limit() 62 2.435e-05 2.821e-05 3.437e-05 0.00% FabArrayBase::CPC::define() 2 2.202e-05 2.504e-05 3.194e-05 0.00% Gravity::swapTimeLevels() 10 7.07e-06 1.349e-05 1.662e-05 0.00% Castro::create_source_corrector() 10 5.87e-06 9.85e-06 1.432e-05 0.00% Amr::initSubcycle() 1 8.353e-06 1.035e-05 1.426e-05 0.00% Castro::FluxRegCrseInit 10 5.554e-06 7.939e-06 1.008e-05 0.00% Gravity::set_mass_offset() 10 6.354e-06 8.73e-06 1.007e-05 0.00% Castro::retry_advance_ctu() 10 4.538e-06 5.811e-06 7.559e-06 0.00% Castro::FluxRegFineAdd() 10 1.963e-06 2.445e-06 3.052e-06 0.00% DistributionMapping::Distribute() 1 9.23e-07 1.098e-06 1.318e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-19-gacc223f99182) finalized