MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.08-19-gacc223f99182) initialized Starting run at 05:39:03 UTC on 2022-09-01. Successfully read inputs file ... Castro git describe: 22.08-11-ga978fcf88 AMReX git describe: 22.08-19-gacc223f99 Microphysics git describe: 22.08-6-ge3a6cb11 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016269686 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.357892426 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.344000516 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342500432 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342658475 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.352756267 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.352419067 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.337108446 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339048716 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.338885602 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.338962293 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.01034642 seconds Ending run at 05:39:06 UTC on 2022-09-01. Run time = 3.678174192 Run time without initialization = 3.464552446 Average number of zones advanced per microsecond: 0.757 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.676 ... 3.678 ... 3.678 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1650 2.4249 2.5169 68.43% Castro::do_advance_ctu() 10 0.0353 0.1268 0.3894 10.59% Gravity::make_radial_gravity() 21 0.3503 0.3619 0.3877 10.54% Castro::initData() 1 0.03958 0.09309 0.1342 3.65% Castro::estTimeStep() 21 0.02715 0.06931 0.1242 3.38% FabArray::ParallelCopy_finish() 41 0.04592 0.06314 0.1187 3.23% FabArray::setVal() 143 0.06061 0.06824 0.06998 1.90% Castro::reset_internal_energy(Fab) 1008 0.04757 0.05011 0.05201 1.41% FabArray::ParallelCopy_nowait() 41 0.02814 0.04468 0.04996 1.36% StateData::FillBoundary(geom) 41 0.03709 0.04212 0.04571 1.24% Castro::normalize_species() 62 0.04053 0.04175 0.04263 1.16% FillPatchIterator::Initialize 41 0.02466 0.03631 0.0404 1.10% Gravity::interpolate_monopole_grav() 21 0.02706 0.02745 0.02761 0.75% Castro::construct_new_gravity_source() 10 0.02036 0.02297 0.02419 0.66% Castro::expand_state() 10 0.009885 0.01887 0.02289 0.62% Castro::computeTemp() 63 0.01797 0.01895 0.02017 0.55% Castro::initialize_do_advance() 10 0.01022 0.01754 0.01973 0.54% MultiFab::Saxpy() 20 0.008589 0.01432 0.01647 0.45% VisMF::Write(FabArray) 2 0.01282 0.01347 0.01619 0.44% Amr::writePlotFile() 2 0.01066 0.01361 0.01453 0.39% Gravity::get_new_grav_vector() 11 0.00749 0.01156 0.01282 0.35% FabArray::setDomainBndry() 41 0.004895 0.01038 0.01237 0.34% Castro::construct_old_gravity_source() 10 0.004831 0.01007 0.01196 0.33% MultiFab::contains_nan() 20 0.009308 0.01092 0.01186 0.32% Gravity::get_old_grav_vector() 10 0.005771 0.009403 0.01081 0.29% Castro::initialize_advance() 10 0.006533 0.009907 0.01067 0.29% Castro::initMFs() 1 0.006625 0.007881 0.01 0.27% StateData::define() 4 0.005574 0.006559 0.008267 0.22% main() 1 0.00443 0.006584 0.00724 0.20% Castro::construct_new_source() 50 0.004926 0.006524 0.007134 0.19% Castro::enforce_min_density() 62 0.005293 0.006104 0.006476 0.18% Castro::swap_state_time_levels() 10 0.003356 0.004473 0.0052 0.14% Amr::coarseTimeStep() 10 0.0008728 0.001567 0.002861 0.08% Castro::buildMetrics() 1 0.001556 0.001854 0.002386 0.06% Castro::finalize_do_advance() 10 0.0006406 0.001463 0.001738 0.05% Amr::InitAmr() 1 0.000294 0.0003749 0.0006398 0.02% Amr::timeStep() 10 0.0001897 0.0002648 0.000563 0.02% DistributionMapping::LeastUsedCPUs() 1 9.852e-06 0.0003474 0.0004452 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002956 0.000307 0.0003217 0.01% Castro::clean_state() 62 0.0001359 0.0001656 0.0002008 0.01% StateDataPhysBCFunct::() 41 0.0001119 0.0001327 0.0001548 0.00% Castro::enforce_consistent_e() 1 7.857e-05 9.786e-05 0.0001463 0.00% FabArray::ParallelCopy() 41 7.746e-05 8.386e-05 9.336e-05 0.00% Castro::do_new_sources() 10 4.671e-05 6.908e-05 9.166e-05 0.00% Amr::FinalizeInit() 1 3.722e-06 1.53e-05 8.945e-05 0.00% Castro::advance() 10 3.758e-05 5.282e-05 8.637e-05 0.00% Castro::construct_old_source() 50 3.708e-05 7.066e-05 8.635e-05 0.00% Castro::do_old_sources() 10 4.117e-05 6.694e-05 8.322e-05 0.00% Castro::Castro() 1 5.601e-05 6.327e-05 7.792e-05 0.00% FillPatchSingleLevel 41 6.393e-05 6.842e-05 7.412e-05 0.00% Castro::subcycle_advance_ctu() 10 4.444e-05 5.539e-05 7.281e-05 0.00% Amr::writeSmallPlotFile() 1 6.043e-05 6.563e-05 6.937e-05 0.00% Castro::apply_source_to_state() 20 3.989e-05 5.188e-05 6.768e-05 0.00% FabArrayBase::getCPC() 41 4.666e-05 5.326e-05 6.196e-05 0.00% Castro::construct_old_gravity() 10 4.173e-05 5.164e-05 6.128e-05 0.00% Castro::construct_new_gravity() 10 4.496e-05 4.997e-05 5.988e-05 0.00% Castro::finalize_advance() 10 4.922e-05 5.469e-05 5.782e-05 0.00% Amr::defBaseLevel() 1 3.479e-05 3.85e-05 4.262e-05 0.00% Castro::enforce_speed_limit() 62 2.492e-05 2.785e-05 3.165e-05 0.00% FabArrayBase::CPC::define() 2 2.234e-05 2.609e-05 3.003e-05 0.00% Castro::check_for_nan() 20 2.033e-05 2.365e-05 2.605e-05 0.00% Castro::post_timestep() 10 1.378e-05 1.605e-05 2.226e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.291e-06 1.128e-05 1.728e-05 0.00% Gravity::swapTimeLevels() 10 5.326e-06 1.169e-05 1.553e-05 0.00% Amr::initSubcycle() 1 8.246e-06 1.044e-05 1.428e-05 0.00% Castro::create_source_corrector() 10 6.681e-06 1.035e-05 1.293e-05 0.00% Castro::computeNewDt() 9 7.317e-06 9.952e-06 1.218e-05 0.00% Castro::FluxRegCrseInit 10 5.796e-06 8.312e-06 1.159e-05 0.00% Gravity::set_mass_offset() 10 6.333e-06 8.996e-06 1.072e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.98e-06 5.629e-06 9.188e-06 0.00% Amr::initialInit() 1 1.388e-06 2.518e-06 8.793e-06 0.00% Amr::InitializeInit() 1 2.277e-06 5.279e-06 8.546e-06 0.00% Castro::retry_advance_ctu() 10 4.954e-06 6.174e-06 7.424e-06 0.00% Castro::post_init() 1 2.699e-06 3.977e-06 5.777e-06 0.00% Castro::computeInitialDt() 2 3.408e-06 4.027e-06 4.814e-06 0.00% Castro::post_regrid() 1 1.938e-06 3.38e-06 4.615e-06 0.00% Castro::FluxRegFineAdd() 10 1.924e-06 2.342e-06 2.985e-06 0.00% Amr::init() 1 1.76e-06 1.976e-06 2.244e-06 0.00% DistributionMapping::Distribute() 1 1.055e-06 1.222e-06 1.367e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.675 3.678 3.678 100.00% Amr::coarseTimeStep() 10 3.447 3.447 3.447 93.71% Amr::timeStep() 10 3.436 3.438 3.438 93.48% Castro::advance() 10 3.421 3.422 3.422 93.03% Castro::subcycle_advance_ctu() 10 3.348 3.35 3.357 91.26% Castro::do_advance_ctu() 10 3.348 3.35 3.357 91.25% Castro::construct_ctu_hydro_source() 10 2.165 2.425 2.517 68.43% Gravity::make_radial_gravity() 21 0.3503 0.3619 0.3877 10.54% Gravity::get_new_grav_vector() 11 0.2365 0.2417 0.244 6.63% Castro::construct_old_gravity() 10 0.2008 0.21 0.2296 6.24% Gravity::get_old_grav_vector() 10 0.2 0.2092 0.229 6.23% FillPatchIterator::Initialize 41 0.1885 0.197 0.2152 5.85% Amr::init() 1 0.2128 0.2131 0.2132 5.80% Castro::construct_new_gravity() 10 0.2003 0.2052 0.2067 5.62% Amr::initialInit() 1 0.1961 0.1965 0.1968 5.35% Castro::initialize_do_advance() 10 0.1684 0.1802 0.1871 5.09% FillPatchSingleLevel 41 0.1366 0.1503 0.1857 5.05% Amr::InitializeInit() 1 0.05921 0.1157 0.1564 4.25% Amr::defBaseLevel() 1 0.0592 0.1157 0.1564 4.25% FabArray::ParallelCopy() 41 0.09494 0.108 0.1471 4.00% Castro::initData() 1 0.04319 0.09724 0.1383 3.76% Amr::FinalizeInit() 1 0.04015 0.08072 0.1374 3.73% Castro::expand_state() 10 0.1234 0.1325 0.1373 3.73% Castro::estTimeStep() 21 0.02715 0.06931 0.1242 3.38% Castro::clean_state() 62 0.1109 0.1163 0.1193 3.24% FabArray::ParallelCopy_finish() 41 0.04592 0.06314 0.1187 3.23% Castro::computeInitialDt() 2 0.001717 0.04231 0.09893 2.69% Castro::initialize_advance() 10 0.0642 0.0711 0.07333 1.99% Castro::computeTemp() 63 0.06585 0.06936 0.07185 1.95% FabArray::setVal() 143 0.06061 0.06824 0.06998 1.90% Castro::do_new_sources() 10 0.05431 0.06305 0.06515 1.77% Castro::reset_internal_energy(MultiFab) 63 0.04788 0.05042 0.05232 1.42% Castro::reset_internal_energy(Fab) 1008 0.04757 0.05011 0.05201 1.41% FabArray::ParallelCopy_nowait() 41 0.02822 0.04476 0.05004 1.36% Castro::do_old_sources() 10 0.03294 0.04506 0.04896 1.33% StateDataPhysBCFunct::() 41 0.03722 0.04226 0.04587 1.25% StateData::FillBoundary(geom) 41 0.03709 0.04212 0.04571 1.24% Castro::normalize_species() 62 0.04053 0.04175 0.04263 1.16% Castro::post_init() 1 0.03624 0.03736 0.0378 1.03% Castro::construct_new_source() 50 0.02529 0.0295 0.03038 0.83% Gravity::interpolate_monopole_grav() 21 0.02706 0.02745 0.02761 0.75% Amr::writePlotFile() 2 0.02683 0.02708 0.0274 0.74% Castro::construct_new_gravity_source() 10 0.02036 0.02297 0.02419 0.66% Castro::apply_source_to_state() 20 0.008629 0.01438 0.01654 0.45% MultiFab::Saxpy() 20 0.008589 0.01432 0.01647 0.45% VisMF::Write(FabArray) 2 0.01282 0.01347 0.01619 0.44% Castro::post_timestep() 10 0.01513 0.01557 0.01602 0.44% Castro::Castro() 1 0.009935 0.01153 0.01423 0.39% FabArray::setDomainBndry() 41 0.004895 0.01038 0.01237 0.34% Castro::construct_old_source() 50 0.004868 0.01015 0.01205 0.33% Castro::construct_old_gravity_source() 10 0.004831 0.01007 0.01196 0.33% Castro::check_for_nan() 20 0.009329 0.01095 0.01189 0.32% MultiFab::contains_nan() 20 0.009308 0.01092 0.01186 0.32% Castro::initMFs() 1 0.006625 0.007881 0.01 0.27% AmrLevel::AmrLevel(dm) 1 0.005582 0.006571 0.008282 0.23% StateData::define() 4 0.005574 0.006559 0.008267 0.22% Castro::computeNewDt() 9 0.006987 0.007002 0.007012 0.19% Castro::enforce_min_density() 62 0.005293 0.006104 0.006476 0.18% Castro::swap_state_time_levels() 10 0.003356 0.004473 0.0052 0.14% Castro::post_regrid() 1 0.001515 0.001958 0.002932 0.08% Castro::buildMetrics() 1 0.00167 0.002003 0.002597 0.07% Castro::finalize_do_advance() 10 0.0006406 0.001463 0.001738 0.05% Amr::InitAmr() 1 0.0003029 0.0003854 0.0006541 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.544e-05 0.0003543 0.0004518 0.01% DistributionMapping::LeastUsedCPUs() 1 9.852e-06 0.0003474 0.0004452 0.01% Castro::enforce_consistent_e() 1 7.857e-05 9.786e-05 0.0001463 0.00% FabArrayBase::getCPC() 41 6.9e-05 7.935e-05 8.54e-05 0.00% Castro::finalize_advance() 10 5.702e-05 6.534e-05 7.104e-05 0.00% Amr::writeSmallPlotFile() 1 6.043e-05 6.563e-05 6.937e-05 0.00% Castro::enforce_speed_limit() 62 2.492e-05 2.785e-05 3.165e-05 0.00% FabArrayBase::CPC::define() 2 2.234e-05 2.609e-05 3.003e-05 0.00% Gravity::swapTimeLevels() 10 5.326e-06 1.169e-05 1.553e-05 0.00% Amr::initSubcycle() 1 8.246e-06 1.044e-05 1.428e-05 0.00% Castro::create_source_corrector() 10 6.681e-06 1.035e-05 1.293e-05 0.00% Castro::FluxRegCrseInit 10 5.796e-06 8.312e-06 1.159e-05 0.00% Gravity::set_mass_offset() 10 6.333e-06 8.996e-06 1.072e-05 0.00% Castro::retry_advance_ctu() 10 4.954e-06 6.174e-06 7.424e-06 0.00% Castro::FluxRegFineAdd() 10 1.924e-06 2.342e-06 2.985e-06 0.00% DistributionMapping::Distribute() 1 1.055e-06 1.222e-06 1.367e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.08-19-gacc223f99182) finalized