MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.09) initialized Starting run at 05:39:07 UTC on 2022-09-02. Successfully read inputs file ... Castro git describe: 22.09 AMReX git describe: 22.09 Microphysics git describe: 22.08-7-g8d22e048 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015531418 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.362670009 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.350824797 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.343561685 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342306203 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.35347989 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.354087594 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.341435811 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339429101 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.34024094 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339897837 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010629411 seconds Ending run at 05:39:11 UTC on 2022-09-02. Run time = 3.696719931 Run time without initialization = 3.486683891 Average number of zones advanced per microsecond: 0.752 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.694 ... 3.696 ... 3.697 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1024 2.4251 2.5312 68.47% Castro::do_advance_ctu() 10 0.04061 0.1471 0.4726 12.78% Gravity::make_radial_gravity() 21 0.3386 0.353 0.3815 10.32% Castro::initData() 1 0.04076 0.08507 0.139 3.76% Castro::estTimeStep() 21 0.04069 0.08527 0.1282 3.47% FabArray::ParallelCopy_finish() 41 0.04365 0.06384 0.126 3.41% FabArray::setVal() 143 0.05998 0.06894 0.07133 1.93% Castro::reset_internal_energy(Fab) 1008 0.04688 0.05028 0.05132 1.39% FabArray::ParallelCopy_nowait() 41 0.02729 0.04486 0.05056 1.37% StateData::FillBoundary(geom) 41 0.03479 0.04164 0.04584 1.24% Castro::normalize_species() 62 0.04017 0.04191 0.04312 1.17% FillPatchIterator::Initialize 41 0.02387 0.03609 0.04042 1.09% Gravity::interpolate_monopole_grav() 21 0.02566 0.02718 0.02795 0.76% Castro::construct_new_gravity_source() 10 0.02015 0.02294 0.02385 0.65% Castro::expand_state() 10 0.009659 0.01885 0.02224 0.60% Castro::computeTemp() 63 0.01755 0.01907 0.02029 0.55% Castro::initialize_do_advance() 10 0.009509 0.01734 0.01922 0.52% MultiFab::Saxpy() 20 0.008764 0.0142 0.01634 0.44% VisMF::Write(FabArray) 2 0.0127 0.01334 0.01571 0.42% Amr::writePlotFile() 2 0.01071 0.01336 0.01403 0.38% Gravity::get_new_grav_vector() 11 0.007511 0.01139 0.01265 0.34% FabArray::setDomainBndry() 41 0.00482 0.01048 0.01264 0.34% MultiFab::contains_nan() 20 0.009342 0.01097 0.01236 0.33% Castro::construct_old_gravity_source() 10 0.004972 0.01006 0.01187 0.32% Castro::initialize_advance() 10 0.006517 0.009885 0.01101 0.30% Gravity::get_old_grav_vector() 10 0.005342 0.009377 0.01099 0.30% Castro::initMFs() 1 0.006921 0.007408 0.008261 0.22% main() 1 0.004396 0.006662 0.007316 0.20% Castro::construct_new_source() 50 0.004834 0.006487 0.007068 0.19% Castro::enforce_min_density() 62 0.005154 0.006066 0.006655 0.18% StateData::define() 4 0.00564 0.005911 0.006354 0.17% Castro::swap_state_time_levels() 10 0.003242 0.004306 0.004674 0.13% Amr::coarseTimeStep() 10 0.001163 0.001931 0.004233 0.11% Castro::finalize_do_advance() 10 0.0005805 0.001521 0.001908 0.05% Castro::buildMetrics() 1 0.00162 0.001701 0.001831 0.05% Amr::timeStep() 10 0.0001723 0.0002407 0.0005366 0.01% Amr::InitAmr() 1 0.0002504 0.0002865 0.0004423 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002997 0.0003144 0.0003476 0.01% DistributionMapping::LeastUsedCPUs() 1 7.976e-06 0.0001798 0.0002152 0.01% Castro::clean_state() 62 0.0001516 0.0001784 0.0002077 0.01% StateDataPhysBCFunct::() 41 0.0001192 0.0001332 0.0001476 0.00% FabArray::ParallelCopy() 41 6.72e-05 9.285e-05 0.0001353 0.00% Castro::construct_old_gravity() 10 3.264e-05 6.262e-05 0.0001193 0.00% Castro::enforce_consistent_e() 1 8.044e-05 9.834e-05 0.0001184 0.00% Amr::FinalizeInit() 1 3.786e-06 1.668e-05 9.399e-05 0.00% Castro::construct_old_source() 50 3.989e-05 7.351e-05 8.907e-05 0.00% Castro::Castro() 1 5.638e-05 7.039e-05 8.641e-05 0.00% Castro::do_new_sources() 10 3.89e-05 7.072e-05 8.64e-05 0.00% FillPatchSingleLevel 41 6.153e-05 6.955e-05 8.377e-05 0.00% Castro::do_old_sources() 10 4.542e-05 6.974e-05 7.91e-05 0.00% Castro::apply_source_to_state() 20 4.02e-05 5.162e-05 7.432e-05 0.00% FabArrayBase::getCPC() 41 5.506e-05 6.15e-05 7.246e-05 0.00% Castro::subcycle_advance_ctu() 10 3.491e-05 5.22e-05 6.671e-05 0.00% Castro::advance() 10 3.422e-05 4.65e-05 6.544e-05 0.00% Amr::writeSmallPlotFile() 1 3.152e-05 5.424e-05 6.397e-05 0.00% Amr::defBaseLevel() 1 3.774e-05 4.779e-05 5.795e-05 0.00% Castro::finalize_advance() 10 5.252e-05 5.548e-05 5.758e-05 0.00% Castro::construct_new_gravity() 10 3.5e-05 4.87e-05 5.682e-05 0.00% Castro::enforce_speed_limit() 62 2.195e-05 2.984e-05 3.39e-05 0.00% FabArrayBase::CPC::define() 2 2.343e-05 2.589e-05 2.939e-05 0.00% Castro::check_for_nan() 20 2.143e-05 2.367e-05 2.553e-05 0.00% Castro::post_timestep() 10 1.2e-05 1.622e-05 2.405e-05 0.00% Gravity::swapTimeLevels() 10 5.987e-06 1.305e-05 1.683e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.81e-06 1.026e-05 1.394e-05 0.00% Castro::create_source_corrector() 10 6.505e-06 1.01e-05 1.308e-05 0.00% Castro::FluxRegCrseInit 10 6.147e-06 8.837e-06 1.165e-05 0.00% Castro::computeNewDt() 9 8.239e-06 9.808e-06 1.148e-05 0.00% Gravity::set_mass_offset() 10 6.194e-06 9.028e-06 1.096e-05 0.00% Amr::initSubcycle() 1 8.113e-06 8.986e-06 1.016e-05 0.00% Castro::retry_advance_ctu() 10 4.711e-06 6.547e-06 8.969e-06 0.00% Amr::InitializeInit() 1 1.988e-06 4.545e-06 8.302e-06 0.00% Castro::post_regrid() 1 2.083e-06 3.594e-06 6.998e-06 0.00% Amr::init() 1 1.717e-06 2.418e-06 6.185e-06 0.00% Castro::computeInitialDt() 2 3.397e-06 4.292e-06 6.003e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.504e-06 4.421e-06 5.838e-06 0.00% Castro::post_init() 1 2.914e-06 3.484e-06 4.741e-06 0.00% Castro::FluxRegFineAdd() 10 1.896e-06 2.546e-06 3.48e-06 0.00% Amr::initialInit() 1 1.5e-06 1.81e-06 2.229e-06 0.00% DistributionMapping::Distribute() 1 8.85e-07 1.026e-06 1.205e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.694 3.696 3.697 100.00% Amr::coarseTimeStep() 10 3.469 3.469 3.469 93.83% Amr::timeStep() 10 3.456 3.459 3.459 93.58% Castro::advance() 10 3.441 3.442 3.443 93.12% Castro::subcycle_advance_ctu() 10 3.369 3.371 3.379 91.40% Castro::do_advance_ctu() 10 3.369 3.371 3.379 91.40% Castro::construct_ctu_hydro_source() 10 2.102 2.425 2.531 68.47% Gravity::make_radial_gravity() 21 0.3386 0.353 0.3815 10.32% Gravity::get_new_grav_vector() 11 0.2288 0.2327 0.2345 6.34% Castro::construct_old_gravity() 10 0.1968 0.2103 0.2324 6.29% Gravity::get_old_grav_vector() 10 0.1959 0.2095 0.2319 6.27% FillPatchIterator::Initialize 41 0.1872 0.1973 0.2172 5.87% Amr::init() 1 0.2094 0.2096 0.2097 5.67% Castro::construct_new_gravity() 10 0.201 0.2046 0.2063 5.58% Amr::initialInit() 1 0.1935 0.1936 0.1939 5.25% Castro::initialize_do_advance() 10 0.1671 0.1798 0.1887 5.10% FillPatchSingleLevel 41 0.1352 0.1507 0.1885 5.10% Amr::InitializeInit() 1 0.06175 0.1069 0.1621 4.39% Amr::defBaseLevel() 1 0.06175 0.1069 0.1621 4.39% FabArray::ParallelCopy() 41 0.09242 0.1089 0.1535 4.15% Castro::initData() 1 0.04488 0.08931 0.1433 3.88% Castro::expand_state() 10 0.1244 0.1325 0.1392 3.77% Amr::FinalizeInit() 1 0.03155 0.08676 0.1318 3.57% Castro::estTimeStep() 21 0.04069 0.08527 0.1282 3.47% FabArray::ParallelCopy_finish() 41 0.04365 0.06384 0.126 3.41% Castro::clean_state() 62 0.1099 0.1168 0.1202 3.25% Castro::computeInitialDt() 2 0.001831 0.05707 0.1022 2.77% Castro::initialize_advance() 10 0.06234 0.07103 0.07306 1.98% Castro::computeTemp() 63 0.06498 0.06967 0.07165 1.94% FabArray::setVal() 143 0.05998 0.06894 0.07133 1.93% Castro::do_new_sources() 10 0.05447 0.06305 0.06484 1.75% Castro::reset_internal_energy(MultiFab) 63 0.04723 0.0506 0.05164 1.40% Castro::reset_internal_energy(Fab) 1008 0.04688 0.05028 0.05132 1.39% FabArray::ParallelCopy_nowait() 41 0.02738 0.04495 0.05064 1.37% Castro::do_old_sources() 10 0.0339 0.04532 0.04899 1.33% StateDataPhysBCFunct::() 41 0.03493 0.04177 0.04598 1.24% StateData::FillBoundary(geom) 41 0.03479 0.04164 0.04584 1.24% Castro::normalize_species() 62 0.04017 0.04191 0.04312 1.17% Castro::construct_new_source() 50 0.02498 0.02942 0.03064 0.83% Castro::post_init() 1 0.02873 0.02885 0.02916 0.79% Gravity::interpolate_monopole_grav() 21 0.02566 0.02718 0.02795 0.76% Amr::writePlotFile() 2 0.02641 0.0267 0.02692 0.73% Castro::construct_new_gravity_source() 10 0.02015 0.02294 0.02385 0.65% Castro::post_timestep() 10 0.01462 0.01609 0.01671 0.45% Castro::apply_source_to_state() 20 0.008814 0.01425 0.01642 0.44% MultiFab::Saxpy() 20 0.008764 0.0142 0.01634 0.44% VisMF::Write(FabArray) 2 0.0127 0.01334 0.01571 0.42% FabArray::setDomainBndry() 41 0.00482 0.01048 0.01264 0.34% Castro::check_for_nan() 20 0.009366 0.011 0.01239 0.34% MultiFab::contains_nan() 20 0.009342 0.01097 0.01236 0.33% Castro::Castro() 1 0.01093 0.01141 0.01224 0.33% Castro::construct_old_source() 50 0.005012 0.01014 0.01196 0.32% Castro::construct_old_gravity_source() 10 0.004972 0.01006 0.01187 0.32% Castro::initMFs() 1 0.006921 0.007408 0.008261 0.22% Castro::computeNewDt() 9 0.007403 0.007411 0.007419 0.20% Castro::enforce_min_density() 62 0.005154 0.006066 0.006655 0.18% AmrLevel::AmrLevel(dm) 1 0.005648 0.005921 0.006366 0.17% StateData::define() 4 0.00564 0.005911 0.006354 0.17% Castro::swap_state_time_levels() 10 0.003242 0.004306 0.004674 0.13% Castro::post_regrid() 1 0.001575 0.001728 0.002013 0.05% Castro::buildMetrics() 1 0.00174 0.001834 0.001981 0.05% Castro::finalize_do_advance() 10 0.0005805 0.001521 0.001908 0.05% Amr::InitAmr() 1 0.0002594 0.0002955 0.0004521 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.333e-05 0.0001852 0.000222 0.01% DistributionMapping::LeastUsedCPUs() 1 7.976e-06 0.0001798 0.0002152 0.01% Castro::enforce_consistent_e() 1 8.044e-05 9.834e-05 0.0001184 0.00% FabArrayBase::getCPC() 41 7.926e-05 8.739e-05 9.835e-05 0.00% Castro::finalize_advance() 10 6.079e-05 6.686e-05 7.197e-05 0.00% Amr::writeSmallPlotFile() 1 3.152e-05 5.424e-05 6.397e-05 0.00% Castro::enforce_speed_limit() 62 2.195e-05 2.984e-05 3.39e-05 0.00% FabArrayBase::CPC::define() 2 2.343e-05 2.589e-05 2.939e-05 0.00% Gravity::swapTimeLevels() 10 5.987e-06 1.305e-05 1.683e-05 0.00% Castro::create_source_corrector() 10 6.505e-06 1.01e-05 1.308e-05 0.00% Castro::FluxRegCrseInit 10 6.147e-06 8.837e-06 1.165e-05 0.00% Gravity::set_mass_offset() 10 6.194e-06 9.028e-06 1.096e-05 0.00% Amr::initSubcycle() 1 8.113e-06 8.986e-06 1.016e-05 0.00% Castro::retry_advance_ctu() 10 4.711e-06 6.547e-06 8.969e-06 0.00% Castro::FluxRegFineAdd() 10 1.896e-06 2.546e-06 3.48e-06 0.00% DistributionMapping::Distribute() 1 8.85e-07 1.026e-06 1.205e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.09) finalized