MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.09-1-gfb0b31e1439b) initialized Starting run at 05:39:41 UTC on 2022-09-05. Successfully read inputs file ... Castro git describe: 22.09 AMReX git describe: 22.09-1-gfb0b31e14 Microphysics git describe: 22.08-10-g65622313 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01535591 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.347271409 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.341156591 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.34130004 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.340331871 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.345259085 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.347786126 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.339346179 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.337363029 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.338893402 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339934244 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010994899 seconds Ending run at 05:39:45 UTC on 2022-09-05. Run time = 3.650583123 Run time without initialization = 3.437327131 Average number of zones advanced per microsecond: 0.763 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.648 ... 3.65 ... 3.651 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1578 2.4171 2.5212 69.06% Castro::do_advance_ctu() 10 0.02632 0.1288 0.3912 10.72% Gravity::make_radial_gravity() 21 0.3334 0.349 0.3732 10.22% Castro::initData() 1 0.04146 0.09055 0.1433 3.92% Castro::estTimeStep() 21 0.02089 0.08008 0.1302 3.57% FabArray::ParallelCopy_finish() 41 0.03734 0.0579 0.1148 3.14% FabArray::setVal() 143 0.05867 0.06501 0.06798 1.86% Castro::reset_internal_energy(Fab) 1008 0.04563 0.0502 0.05266 1.44% FabArray::ParallelCopy_nowait() 41 0.02806 0.04393 0.04989 1.37% StateData::FillBoundary(geom) 41 0.03749 0.04173 0.04568 1.25% Castro::normalize_species() 62 0.0397 0.04181 0.04351 1.19% FillPatchIterator::Initialize 41 0.0238 0.03551 0.04013 1.10% Gravity::interpolate_monopole_grav() 21 0.02667 0.02747 0.02776 0.76% Castro::construct_new_gravity_source() 10 0.01987 0.02214 0.02316 0.63% Castro::expand_state() 10 0.01019 0.01806 0.02214 0.61% Castro::computeTemp() 63 0.0172 0.0191 0.01993 0.55% Castro::initialize_do_advance() 10 0.009613 0.01643 0.01889 0.52% MultiFab::Saxpy() 20 0.008885 0.01393 0.016 0.44% VisMF::Write(FabArray) 2 0.01266 0.01345 0.01593 0.44% Amr::writePlotFile() 2 0.01065 0.01318 0.01413 0.39% Gravity::get_new_grav_vector() 11 0.007525 0.01105 0.0125 0.34% MultiFab::contains_nan() 20 0.009315 0.01083 0.01231 0.34% FabArray::setDomainBndry() 41 0.005002 0.0101 0.01231 0.34% Castro::construct_old_gravity_source() 10 0.005135 0.009556 0.01159 0.32% Gravity::get_old_grav_vector() 10 0.00554 0.009044 0.01095 0.30% Castro::initMFs() 1 0.00663 0.008396 0.009924 0.27% Castro::initialize_advance() 10 0.003343 0.008068 0.009306 0.25% StateData::define() 4 0.005492 0.006919 0.008149 0.22% Castro::construct_new_source() 50 0.004938 0.006468 0.007072 0.19% main() 1 0.004423 0.006198 0.007025 0.19% Castro::enforce_min_density() 62 0.005235 0.005933 0.006544 0.18% Castro::swap_state_time_levels() 10 0.003172 0.004081 0.004469 0.12% Amr::coarseTimeStep() 10 0.001013 0.001893 0.003877 0.11% Castro::buildMetrics() 1 0.001567 0.001977 0.002347 0.06% Castro::finalize_do_advance() 10 0.0008093 0.001339 0.001644 0.05% Amr::InitAmr() 1 0.0002769 0.0003989 0.000502 0.01% Amr::timeStep() 10 0.0001741 0.0002331 0.0004233 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002863 0.0003018 0.0003162 0.01% DistributionMapping::LeastUsedCPUs() 1 6.204e-06 0.0001243 0.0002701 0.01% Castro::clean_state() 62 0.0001488 0.0001633 0.0001777 0.00% StateDataPhysBCFunct::() 41 0.0001051 0.0001265 0.0001427 0.00% FabArray::ParallelCopy() 41 7.182e-05 8.923e-05 0.000102 0.00% Castro::enforce_consistent_e() 1 7.753e-05 8.757e-05 9.92e-05 0.00% Castro::do_new_sources() 10 4.061e-05 7.276e-05 9.709e-05 0.00% Castro::do_old_sources() 10 3.181e-05 6.806e-05 8.734e-05 0.00% Castro::construct_old_source() 50 2.906e-05 6.769e-05 8.591e-05 0.00% Castro::Castro() 1 5.439e-05 6.634e-05 7.903e-05 0.00% Amr::FinalizeInit() 1 3.096e-06 1.305e-05 7.502e-05 0.00% FillPatchSingleLevel 41 6.118e-05 6.748e-05 7.365e-05 0.00% Amr::writeSmallPlotFile() 1 2.521e-05 5.661e-05 7.12e-05 0.00% Castro::construct_old_gravity() 10 3.179e-05 5.268e-05 6.869e-05 0.00% Castro::apply_source_to_state() 20 2.726e-05 5.103e-05 6.742e-05 0.00% FabArrayBase::getCPC() 41 5.022e-05 5.459e-05 6.559e-05 0.00% Castro::subcycle_advance_ctu() 10 3.644e-05 4.804e-05 6.033e-05 0.00% Castro::finalize_advance() 10 4.466e-05 5.239e-05 5.849e-05 0.00% Castro::advance() 10 3.785e-05 4.617e-05 5.245e-05 0.00% Amr::defBaseLevel() 1 3.485e-05 4.32e-05 5.174e-05 0.00% Castro::construct_new_gravity() 10 3.92e-05 4.821e-05 5.154e-05 0.00% FabArrayBase::CPC::define() 2 2.005e-05 2.589e-05 4.07e-05 0.00% Castro::enforce_speed_limit() 62 2.518e-05 2.894e-05 3.572e-05 0.00% Castro::check_for_nan() 20 1.906e-05 2.43e-05 3.179e-05 0.00% Castro::post_timestep() 10 1.426e-05 1.671e-05 2.549e-05 0.00% Amr::initSubcycle() 1 8.175e-06 1.384e-05 2.443e-05 0.00% Gravity::swapTimeLevels() 10 5.707e-06 1.207e-05 1.832e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.593e-06 1.21e-05 1.818e-05 0.00% Amr::InitializeInit() 1 2.043e-06 6.437e-06 1.573e-05 0.00% Castro::create_source_corrector() 10 6.043e-06 9.748e-06 1.258e-05 0.00% Castro::computeNewDt() 9 8.216e-06 9.701e-06 1.137e-05 0.00% Gravity::set_mass_offset() 10 6.504e-06 8.714e-06 1.098e-05 0.00% Castro::FluxRegCrseInit 10 5.563e-06 7.949e-06 9.708e-06 0.00% Castro::post_init() 1 2.787e-06 4.135e-06 8.76e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.893e-06 5.039e-06 8.2e-06 0.00% Castro::retry_advance_ctu() 10 4.075e-06 5.687e-06 6.888e-06 0.00% Castro::computeInitialDt() 2 3.157e-06 3.589e-06 4.413e-06 0.00% Castro::post_regrid() 1 1.65e-06 2.601e-06 3.868e-06 0.00% Castro::FluxRegFineAdd() 10 1.964e-06 2.388e-06 2.734e-06 0.00% Amr::init() 1 1.814e-06 2.234e-06 2.668e-06 0.00% Amr::initialInit() 1 1.544e-06 1.636e-06 1.753e-06 0.00% DistributionMapping::Distribute() 1 9.35e-07 1.218e-06 1.435e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.648 3.65 3.651 100.00% Amr::coarseTimeStep() 10 3.419 3.419 3.419 93.66% Amr::timeStep() 10 3.407 3.409 3.41 93.41% Castro::advance() 10 3.392 3.393 3.393 92.94% Castro::subcycle_advance_ctu() 10 3.322 3.325 3.334 91.34% Castro::do_advance_ctu() 10 3.322 3.325 3.334 91.34% Castro::construct_ctu_hydro_source() 10 2.158 2.417 2.521 69.06% Gravity::make_radial_gravity() 21 0.3334 0.349 0.3732 10.22% Castro::construct_old_gravity() 10 0.1964 0.21 0.2287 6.26% Gravity::get_new_grav_vector() 11 0.2252 0.2269 0.2285 6.26% Gravity::get_old_grav_vector() 10 0.1955 0.2093 0.2281 6.25% Amr::init() 1 0.2126 0.2127 0.2128 5.83% FillPatchIterator::Initialize 41 0.1792 0.1895 0.2102 5.76% Castro::construct_new_gravity() 10 0.2011 0.2024 0.2038 5.58% Amr::initialInit() 1 0.1971 0.1972 0.1973 5.40% FillPatchSingleLevel 41 0.1283 0.1439 0.1814 4.97% Castro::initialize_do_advance() 10 0.1603 0.1719 0.18 4.93% Amr::InitializeInit() 1 0.06096 0.1139 0.1696 4.65% Amr::defBaseLevel() 1 0.06095 0.1139 0.1696 4.65% Castro::initData() 1 0.04529 0.09441 0.1471 4.03% FabArray::ParallelCopy() 41 0.08549 0.102 0.143 3.92% Amr::FinalizeInit() 1 0.02745 0.0833 0.1363 3.73% Castro::estTimeStep() 21 0.02089 0.08008 0.1302 3.57% Castro::expand_state() 10 0.119 0.1255 0.1294 3.54% Castro::clean_state() 62 0.1076 0.1166 0.1215 3.33% FabArray::ParallelCopy_finish() 41 0.03734 0.0579 0.1148 3.14% Castro::computeInitialDt() 2 0.001706 0.05755 0.1105 3.03% Castro::computeTemp() 63 0.06313 0.0696 0.07282 1.99% Castro::initialize_advance() 10 0.0575 0.06738 0.07064 1.94% FabArray::setVal() 143 0.05867 0.06501 0.06798 1.86% Castro::do_new_sources() 10 0.05388 0.06139 0.0646 1.77% Castro::reset_internal_energy(MultiFab) 63 0.04592 0.0505 0.05296 1.45% Castro::reset_internal_energy(Fab) 1008 0.04563 0.0502 0.05266 1.44% FabArray::ParallelCopy_nowait() 41 0.02816 0.04401 0.04997 1.37% Castro::do_old_sources() 10 0.03282 0.04387 0.0482 1.32% StateDataPhysBCFunct::() 41 0.03761 0.04186 0.04581 1.25% StateData::FillBoundary(geom) 41 0.03749 0.04173 0.04568 1.25% Castro::normalize_species() 62 0.0397 0.04181 0.04351 1.19% Castro::construct_new_source() 50 0.02492 0.02861 0.03021 0.83% Gravity::interpolate_monopole_grav() 21 0.02667 0.02747 0.02776 0.76% Amr::writePlotFile() 2 0.02649 0.02663 0.0268 0.73% Castro::post_init() 1 0.02498 0.02513 0.0253 0.69% Castro::construct_new_gravity_source() 10 0.01987 0.02214 0.02316 0.63% Castro::post_timestep() 10 0.0149 0.0163 0.01696 0.46% Castro::apply_source_to_state() 20 0.008927 0.01398 0.01605 0.44% MultiFab::Saxpy() 20 0.008885 0.01393 0.016 0.44% VisMF::Write(FabArray) 2 0.01266 0.01345 0.01593 0.44% Castro::Castro() 1 0.009901 0.01233 0.0146 0.40% Castro::check_for_nan() 20 0.009337 0.01085 0.01234 0.34% MultiFab::contains_nan() 20 0.009315 0.01083 0.01231 0.34% FabArray::setDomainBndry() 41 0.005002 0.0101 0.01231 0.34% Castro::construct_old_source() 50 0.005177 0.009623 0.01167 0.32% Castro::construct_old_gravity_source() 10 0.005135 0.009556 0.01159 0.32% Castro::initMFs() 1 0.00663 0.008396 0.009924 0.27% AmrLevel::AmrLevel(dm) 1 0.005499 0.006931 0.008162 0.22% StateData::define() 4 0.005492 0.006919 0.008149 0.22% Castro::computeNewDt() 9 0.007422 0.007434 0.007448 0.20% Castro::enforce_min_density() 62 0.005235 0.005933 0.006544 0.18% Castro::swap_state_time_levels() 10 0.003172 0.004081 0.004469 0.12% Castro::buildMetrics() 1 0.001682 0.002142 0.002565 0.07% Castro::finalize_do_advance() 10 0.0008093 0.001339 0.001644 0.05% Castro::post_regrid() 1 0.001361 0.001542 0.001623 0.04% Amr::InitAmr() 1 0.0002858 0.0004127 0.0005265 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.173e-05 0.0001306 0.0002764 0.01% DistributionMapping::LeastUsedCPUs() 1 6.204e-06 0.0001243 0.0002701 0.01% Castro::enforce_consistent_e() 1 7.753e-05 8.757e-05 9.92e-05 0.00% FabArrayBase::getCPC() 41 7.305e-05 8.047e-05 9.188e-05 0.00% Amr::writeSmallPlotFile() 1 2.521e-05 5.661e-05 7.12e-05 0.00% Castro::finalize_advance() 10 5.369e-05 6.273e-05 6.918e-05 0.00% FabArrayBase::CPC::define() 2 2.005e-05 2.589e-05 4.07e-05 0.00% Castro::enforce_speed_limit() 62 2.518e-05 2.894e-05 3.572e-05 0.00% Amr::initSubcycle() 1 8.175e-06 1.384e-05 2.443e-05 0.00% Gravity::swapTimeLevels() 10 5.707e-06 1.207e-05 1.832e-05 0.00% Castro::create_source_corrector() 10 6.043e-06 9.748e-06 1.258e-05 0.00% Gravity::set_mass_offset() 10 6.504e-06 8.714e-06 1.098e-05 0.00% Castro::FluxRegCrseInit 10 5.563e-06 7.949e-06 9.708e-06 0.00% Castro::retry_advance_ctu() 10 4.075e-06 5.687e-06 6.888e-06 0.00% Castro::FluxRegFineAdd() 10 1.964e-06 2.388e-06 2.734e-06 0.00% DistributionMapping::Distribute() 1 9.35e-07 1.218e-06 1.435e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.09-1-gfb0b31e1439b) finalized