MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.09-4-g539427a19b20) initialized Starting run at 05:39:20 UTC on 2022-09-07. Successfully read inputs file ... Castro git describe: 22.09 AMReX git describe: 22.09-4-g539427a19 Microphysics git describe: 22.08-10-g65622313 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016822574 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.355707279 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.345739306 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.34401605 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.344409771 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.353253601 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.353972288 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.340440601 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.341308266 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.340790628 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.341314316 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.01084495 seconds Ending run at 05:39:24 UTC on 2022-09-07. Run time = 3.662757084 Run time without initialization = 3.479783747 Average number of zones advanced per microsecond: 0.753 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.66 ... 3.662 ... 3.663 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0897 2.4190 2.5342 69.19% Castro::do_advance_ctu() 10 0.02743 0.1464 0.4787 13.07% Gravity::make_radial_gravity() 21 0.3343 0.3504 0.3775 10.31% FabArray::ParallelCopy_finish() 41 0.04266 0.06523 0.1283 3.50% Castro::initData() 1 0.03904 0.07993 0.1161 3.17% Castro::estTimeStep() 21 0.02597 0.0642 0.1057 2.88% FabArray::setVal() 143 0.06031 0.06831 0.07072 1.93% Castro::reset_internal_energy(Fab) 1008 0.04643 0.05017 0.05246 1.43% FabArray::ParallelCopy_nowait() 41 0.02737 0.0446 0.05035 1.37% StateData::FillBoundary(geom) 41 0.03371 0.04164 0.04739 1.29% Castro::normalize_species() 62 0.03954 0.04175 0.04274 1.17% FillPatchIterator::Initialize 41 0.02341 0.0357 0.03993 1.09% Gravity::interpolate_monopole_grav() 21 0.02597 0.0274 0.0279 0.76% Castro::construct_new_gravity_source() 10 0.02043 0.02286 0.02374 0.65% Castro::expand_state() 10 0.009776 0.01841 0.02228 0.61% Castro::computeTemp() 63 0.01773 0.01932 0.02007 0.55% Castro::initialize_do_advance() 10 0.009313 0.01724 0.01893 0.52% VisMF::Write(FabArray) 2 0.01331 0.01429 0.01827 0.50% MultiFab::Saxpy() 20 0.008648 0.01432 0.01617 0.44% Amr::writePlotFile() 2 0.009634 0.0131 0.01416 0.39% MultiFab::contains_nan() 20 0.009249 0.01095 0.01263 0.34% Gravity::get_new_grav_vector() 11 0.007347 0.01142 0.01255 0.34% FabArray::setDomainBndry() 41 0.004882 0.01042 0.01253 0.34% Castro::construct_old_gravity_source() 10 0.004808 0.01001 0.01164 0.32% Castro::initialize_advance() 10 0.006646 0.009906 0.01114 0.30% Gravity::get_old_grav_vector() 10 0.005472 0.009276 0.01103 0.30% Castro::initMFs() 1 0.006734 0.007662 0.01016 0.28% StateData::define() 4 0.005559 0.006597 0.00804 0.22% main() 1 0.00445 0.006662 0.007255 0.20% Castro::enforce_min_density() 62 0.005871 0.006697 0.00711 0.19% Castro::construct_new_source() 50 0.00488 0.006529 0.007104 0.19% Castro::swap_state_time_levels() 10 0.003249 0.004279 0.004628 0.13% Amr::coarseTimeStep() 10 0.0009151 0.001621 0.002879 0.08% Castro::buildMetrics() 1 0.001581 0.001795 0.00234 0.06% Castro::finalize_do_advance() 10 0.0005837 0.001655 0.002029 0.06% Amr::InitAmr() 1 0.0002819 0.0004109 0.0005171 0.01% Amr::timeStep() 10 0.0001669 0.000216 0.0003848 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002711 0.0002962 0.0003374 0.01% DistributionMapping::LeastUsedCPUs() 1 6.881e-06 0.0001296 0.0002732 0.01% Castro::clean_state() 62 0.0001562 0.0001766 0.0001997 0.01% StateDataPhysBCFunct::() 41 0.0001052 0.0001186 0.0001331 0.00% FabArray::ParallelCopy() 41 6.427e-05 8.629e-05 0.0001001 0.00% Castro::enforce_consistent_e() 1 8.167e-05 8.831e-05 9.414e-05 0.00% Castro::construct_old_source() 50 2.574e-05 6.977e-05 9.202e-05 0.00% Castro::do_new_sources() 10 4.006e-05 7.018e-05 8.745e-05 0.00% Castro::do_old_sources() 10 3.618e-05 7.135e-05 8.538e-05 0.00% FillPatchSingleLevel 41 6.074e-05 6.724e-05 7.764e-05 0.00% Amr::FinalizeInit() 1 3.872e-06 1.351e-05 7.67e-05 0.00% Castro::Castro() 1 4.736e-05 5.945e-05 7.247e-05 0.00% Amr::writeSmallPlotFile() 1 2.272e-05 5.195e-05 6.859e-05 0.00% Castro::construct_old_gravity() 10 3.331e-05 5.059e-05 6.681e-05 0.00% FabArrayBase::getCPC() 41 4.938e-05 5.571e-05 6.52e-05 0.00% Castro::finalize_advance() 10 4.807e-05 5.782e-05 6.433e-05 0.00% Castro::construct_new_gravity() 10 3.905e-05 5.081e-05 6.362e-05 0.00% Amr::defBaseLevel() 1 3.607e-05 4.4e-05 6.233e-05 0.00% Castro::apply_source_to_state() 20 3.32e-05 4.747e-05 5.901e-05 0.00% Castro::subcycle_advance_ctu() 10 3.041e-05 4.34e-05 5.265e-05 0.00% Castro::advance() 10 3.098e-05 4.197e-05 4.93e-05 0.00% Castro::post_timestep() 10 1.423e-05 2.115e-05 3.207e-05 0.00% FabArrayBase::CPC::define() 2 2.2e-05 2.646e-05 3.04e-05 0.00% Castro::enforce_speed_limit() 62 2.754e-05 2.804e-05 2.853e-05 0.00% Castro::check_for_nan() 20 1.936e-05 2.374e-05 2.77e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.19e-05 1.508e-05 2.242e-05 0.00% Gravity::swapTimeLevels() 10 6.09e-06 1.289e-05 1.714e-05 0.00% Amr::initSubcycle() 1 8.109e-06 1.171e-05 1.704e-05 0.00% Castro::create_source_corrector() 10 5.74e-06 1.037e-05 1.262e-05 0.00% Castro::computeNewDt() 9 8.3e-06 9.794e-06 1.132e-05 0.00% Castro::post_init() 1 2.705e-06 4.354e-06 1.028e-05 0.00% Gravity::set_mass_offset() 10 5.926e-06 8.797e-06 1.02e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.621e-06 5.086e-06 9.159e-06 0.00% Castro::FluxRegCrseInit 10 6.516e-06 8.148e-06 9.108e-06 0.00% Amr::InitializeInit() 1 1.964e-06 3.943e-06 8.737e-06 0.00% Castro::retry_advance_ctu() 10 4.539e-06 5.783e-06 6.64e-06 0.00% Castro::computeInitialDt() 2 3.031e-06 3.655e-06 4.178e-06 0.00% Amr::init() 1 1.768e-06 2.208e-06 3.628e-06 0.00% Castro::post_regrid() 1 1.815e-06 2.618e-06 3.623e-06 0.00% Castro::FluxRegFineAdd() 10 1.82e-06 2.32e-06 2.94e-06 0.00% Amr::initialInit() 1 1.388e-06 1.617e-06 1.959e-06 0.00% DistributionMapping::Distribute() 1 9.2e-07 1.215e-06 1.468e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.66 3.662 3.663 100.00% Amr::coarseTimeStep() 10 3.462 3.462 3.462 94.51% Amr::timeStep() 10 3.451 3.452 3.453 94.27% Castro::advance() 10 3.435 3.436 3.436 93.81% Castro::subcycle_advance_ctu() 10 3.362 3.364 3.372 92.05% Castro::do_advance_ctu() 10 3.362 3.364 3.371 92.05% Castro::construct_ctu_hydro_source() 10 2.09 2.419 2.534 69.19% Gravity::make_radial_gravity() 21 0.3343 0.3504 0.3775 10.31% Gravity::get_new_grav_vector() 11 0.2253 0.23 0.2313 6.31% Castro::construct_old_gravity() 10 0.1969 0.211 0.2307 6.30% Gravity::get_old_grav_vector() 10 0.1961 0.2102 0.2301 6.28% FillPatchIterator::Initialize 41 0.1855 0.1979 0.22 6.01% Castro::construct_new_gravity() 10 0.2011 0.2046 0.2054 5.61% FillPatchSingleLevel 41 0.1338 0.1518 0.1917 5.23% Castro::initialize_do_advance() 10 0.1663 0.1793 0.1887 5.15% Amr::init() 1 0.1823 0.1824 0.1826 4.98% Amr::initialInit() 1 0.1654 0.166 0.1665 4.54% FabArray::ParallelCopy() 41 0.0912 0.11 0.1558 4.25% Castro::expand_state() 10 0.1222 0.1317 0.1383 3.77% Amr::InitializeInit() 1 0.05932 0.102 0.1373 3.75% Amr::defBaseLevel() 1 0.05932 0.102 0.1373 3.75% FabArray::ParallelCopy_finish() 41 0.04266 0.06523 0.1283 3.50% Castro::clean_state() 62 0.1089 0.1175 0.1213 3.31% Castro::initData() 1 0.04298 0.08379 0.1198 3.27% Amr::FinalizeInit() 1 0.02903 0.064 0.1071 2.92% Castro::estTimeStep() 21 0.02597 0.0642 0.1057 2.88% Castro::computeInitialDt() 2 0.001704 0.03715 0.07995 2.18% Castro::initialize_advance() 10 0.06299 0.07115 0.07364 2.01% Castro::computeTemp() 63 0.06444 0.06978 0.07286 1.99% FabArray::setVal() 143 0.06031 0.06831 0.07072 1.93% Castro::do_new_sources() 10 0.05432 0.06335 0.06535 1.78% Castro::reset_internal_energy(MultiFab) 63 0.04671 0.05046 0.05279 1.44% Castro::reset_internal_energy(Fab) 1008 0.04643 0.05017 0.05246 1.43% FabArray::ParallelCopy_nowait() 41 0.02745 0.04469 0.05042 1.38% Castro::do_old_sources() 10 0.03211 0.04518 0.04938 1.35% StateDataPhysBCFunct::() 41 0.03382 0.04175 0.04751 1.30% StateData::FillBoundary(geom) 41 0.03371 0.04164 0.04739 1.29% Castro::normalize_species() 62 0.03954 0.04175 0.04274 1.17% Castro::construct_new_source() 50 0.02531 0.02939 0.03063 0.84% Amr::writePlotFile() 2 0.0268 0.02738 0.02791 0.76% Gravity::interpolate_monopole_grav() 21 0.02597 0.0274 0.0279 0.76% Castro::post_init() 1 0.02552 0.02614 0.0267 0.73% Castro::construct_new_gravity_source() 10 0.02043 0.02286 0.02374 0.65% VisMF::Write(FabArray) 2 0.01331 0.01429 0.01827 0.50% Castro::post_timestep() 10 0.01593 0.01619 0.01656 0.45% Castro::apply_source_to_state() 20 0.008681 0.01437 0.01622 0.44% MultiFab::Saxpy() 20 0.008648 0.01432 0.01617 0.44% Castro::Castro() 1 0.01035 0.01138 0.0143 0.39% Castro::check_for_nan() 20 0.009268 0.01097 0.01265 0.35% MultiFab::contains_nan() 20 0.009249 0.01095 0.01263 0.34% FabArray::setDomainBndry() 41 0.004882 0.01042 0.01253 0.34% Castro::construct_old_source() 50 0.004834 0.01008 0.01172 0.32% Castro::construct_old_gravity_source() 10 0.004808 0.01001 0.01164 0.32% Castro::initMFs() 1 0.006734 0.007662 0.01016 0.28% AmrLevel::AmrLevel(dm) 1 0.005571 0.006612 0.008063 0.22% StateData::define() 4 0.005559 0.006597 0.00804 0.22% Castro::computeNewDt() 9 0.007092 0.007103 0.007112 0.19% Castro::enforce_min_density() 62 0.005871 0.006697 0.00711 0.19% Castro::swap_state_time_levels() 10 0.003249 0.004279 0.004628 0.13% Castro::buildMetrics() 1 0.001696 0.001943 0.002564 0.07% Castro::finalize_do_advance() 10 0.0005837 0.001655 0.002029 0.06% Castro::post_regrid() 1 0.001536 0.001609 0.00165 0.05% Amr::InitAmr() 1 0.0002907 0.0004226 0.0005341 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.198e-05 0.0001359 0.0002806 0.01% DistributionMapping::LeastUsedCPUs() 1 6.881e-06 0.0001296 0.0002732 0.01% Castro::enforce_consistent_e() 1 8.167e-05 8.831e-05 9.414e-05 0.00% FabArrayBase::getCPC() 41 7.138e-05 8.218e-05 9.008e-05 0.00% Castro::finalize_advance() 10 5.815e-05 6.828e-05 7.52e-05 0.00% Amr::writeSmallPlotFile() 1 2.272e-05 5.195e-05 6.859e-05 0.00% FabArrayBase::CPC::define() 2 2.2e-05 2.646e-05 3.04e-05 0.00% Castro::enforce_speed_limit() 62 2.754e-05 2.804e-05 2.853e-05 0.00% Gravity::swapTimeLevels() 10 6.09e-06 1.289e-05 1.714e-05 0.00% Amr::initSubcycle() 1 8.109e-06 1.171e-05 1.704e-05 0.00% Castro::create_source_corrector() 10 5.74e-06 1.037e-05 1.262e-05 0.00% Gravity::set_mass_offset() 10 5.926e-06 8.797e-06 1.02e-05 0.00% Castro::FluxRegCrseInit 10 6.516e-06 8.148e-06 9.108e-06 0.00% Castro::retry_advance_ctu() 10 4.539e-06 5.783e-06 6.64e-06 0.00% Castro::FluxRegFineAdd() 10 1.82e-06 2.32e-06 2.94e-06 0.00% DistributionMapping::Distribute() 1 9.2e-07 1.215e-06 1.468e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.09-4-g539427a19b20) finalized