MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.09-9-g67384701a808) initialized Starting run at 05:40:04 UTC on 2022-09-09. Successfully read inputs file ... Castro git describe: 22.09 AMReX git describe: 22.09-9-g67384701a Microphysics git describe: 22.08-12-g91211ba4 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016682499 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.36804514 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.353969785 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.353747218 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.344746293 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.357239926 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.34935983 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338524101 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339070761 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.337731898 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339297714 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010400051 seconds Ending run at 05:40:07 UTC on 2022-09-09. Run time = 3.683393836 Run time without initialization = 3.500078411 Average number of zones advanced per microsecond: 0.749 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.681 ... 3.683 ... 3.683 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1396 2.4477 2.5334 68.78% Castro::do_advance_ctu() 10 0.04431 0.1299 0.4406 11.96% Gravity::make_radial_gravity() 21 0.339 0.3538 0.3822 10.38% FabArray::ParallelCopy_finish() 41 0.04051 0.05999 0.1224 3.32% Castro::initData() 1 0.03967 0.07961 0.1162 3.16% Castro::estTimeStep() 21 0.02812 0.06523 0.1037 2.81% FabArray::setVal() 143 0.05784 0.06939 0.07282 1.98% FabArray::ParallelCopy_nowait() 41 0.02772 0.04642 0.05222 1.42% Castro::reset_internal_energy(Fab) 1008 0.04844 0.05003 0.05128 1.39% StateData::FillBoundary(geom) 41 0.03672 0.04241 0.04641 1.26% Castro::normalize_species() 62 0.04081 0.04174 0.04275 1.16% FillPatchIterator::Initialize 41 0.02389 0.03726 0.04116 1.12% Gravity::interpolate_monopole_grav() 21 0.02697 0.0277 0.02819 0.77% Castro::construct_new_gravity_source() 10 0.01986 0.02271 0.0236 0.64% Castro::expand_state() 10 0.009401 0.01895 0.02193 0.60% Castro::initialize_do_advance() 10 0.01011 0.01856 0.02111 0.57% Castro::computeTemp() 63 0.01795 0.01908 0.01989 0.54% VisMF::Write(FabArray) 2 0.01296 0.01365 0.01726 0.47% MultiFab::Saxpy() 20 0.007979 0.01457 0.01685 0.46% Amr::writePlotFile() 2 0.01008 0.01377 0.01455 0.40% Gravity::get_new_grav_vector() 11 0.007519 0.01222 0.01337 0.36% FabArray::setDomainBndry() 41 0.004791 0.01105 0.01294 0.35% MultiFab::contains_nan() 20 0.009671 0.01147 0.01292 0.35% Castro::initialize_advance() 10 0.01045 0.0108 0.01186 0.32% Castro::construct_old_gravity_source() 10 0.004703 0.01011 0.01183 0.32% Gravity::get_old_grav_vector() 10 0.00554 0.009901 0.01135 0.31% Castro::initMFs() 1 0.006805 0.007078 0.008772 0.24% Castro::construct_new_source() 50 0.004728 0.006614 0.00724 0.20% Castro::enforce_min_density() 62 0.005897 0.00671 0.007215 0.20% main() 1 0.004313 0.006562 0.007204 0.20% StateData::define() 4 0.005553 0.00575 0.006358 0.17% Castro::swap_state_time_levels() 10 0.003298 0.004478 0.004777 0.13% Amr::coarseTimeStep() 10 0.0009834 0.00175 0.003658 0.10% Castro::finalize_do_advance() 10 0.0006556 0.001572 0.001902 0.05% Castro::buildMetrics() 1 0.001584 0.001653 0.001853 0.05% Amr::timeStep() 10 0.0001804 0.0002428 0.0004836 0.01% Amr::InitAmr() 1 0.0002666 0.0003105 0.0004587 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002871 0.0002993 0.0003237 0.01% DistributionMapping::LeastUsedCPUs() 1 7.658e-06 0.0001691 0.0002114 0.01% Castro::clean_state() 62 0.0001477 0.0001676 0.0001859 0.01% StateDataPhysBCFunct::() 41 9.899e-05 0.0001272 0.0001436 0.00% FabArray::ParallelCopy() 41 7.995e-05 9.363e-05 0.0001053 0.00% Castro::Castro() 1 5.681e-05 7.835e-05 0.0001035 0.00% Castro::enforce_consistent_e() 1 7.915e-05 8.813e-05 0.0001025 0.00% Castro::do_new_sources() 10 4.54e-05 7.579e-05 9.243e-05 0.00% Castro::construct_old_source() 50 3.782e-05 7.265e-05 8.74e-05 0.00% Castro::do_old_sources() 10 3.707e-05 7.116e-05 8.587e-05 0.00% FillPatchSingleLevel 41 6.719e-05 7.219e-05 7.687e-05 0.00% FabArrayBase::getCPC() 41 5.01e-05 5.712e-05 7.357e-05 0.00% Amr::FinalizeInit() 1 4.045e-06 1.315e-05 7.344e-05 0.00% Castro::construct_old_gravity() 10 3.71e-05 5.924e-05 7.187e-05 0.00% Amr::writeSmallPlotFile() 1 3.042e-05 6.016e-05 7.181e-05 0.00% Castro::advance() 10 3.146e-05 4.717e-05 6.039e-05 0.00% Castro::subcycle_advance_ctu() 10 3.092e-05 4.886e-05 5.912e-05 0.00% Castro::apply_source_to_state() 20 4.046e-05 5.148e-05 5.83e-05 0.00% Castro::finalize_advance() 10 4.54e-05 5.34e-05 5.652e-05 0.00% Castro::construct_new_gravity() 10 4.025e-05 4.715e-05 5.169e-05 0.00% Amr::defBaseLevel() 1 3.457e-05 4.031e-05 4.465e-05 0.00% Castro::enforce_speed_limit() 62 2.197e-05 2.843e-05 3.39e-05 0.00% FabArrayBase::CPC::define() 2 2.168e-05 2.722e-05 3.181e-05 0.00% Castro::check_for_nan() 20 2.06e-05 2.492e-05 2.769e-05 0.00% Castro::post_timestep() 10 1.348e-05 1.597e-05 2.128e-05 0.00% Gravity::swapTimeLevels() 10 7.358e-06 1.366e-05 1.696e-05 0.00% Castro::create_source_corrector() 10 5.891e-06 1.117e-05 1.629e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.585e-06 1.201e-05 1.412e-05 0.00% Castro::computeNewDt() 9 9.569e-06 1.091e-05 1.3e-05 0.00% Gravity::set_mass_offset() 10 6.159e-06 1.034e-05 1.238e-05 0.00% Castro::FluxRegCrseInit 10 6.485e-06 8.265e-06 1.044e-05 0.00% Amr::initSubcycle() 1 7.995e-06 8.664e-06 9.711e-06 0.00% Castro::retry_advance_ctu() 10 4.531e-06 5.941e-06 7.159e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.494e-06 4.511e-06 7.118e-06 0.00% Amr::InitializeInit() 1 2.019e-06 3.74e-06 6.674e-06 0.00% Castro::computeInitialDt() 2 3.06e-06 3.755e-06 4.306e-06 0.00% Castro::post_init() 1 2.755e-06 3.39e-06 3.87e-06 0.00% Castro::post_regrid() 1 1.692e-06 2.583e-06 3.513e-06 0.00% Castro::FluxRegFineAdd() 10 1.555e-06 2.181e-06 2.754e-06 0.00% Amr::init() 1 1.611e-06 2.03e-06 2.584e-06 0.00% Amr::initialInit() 1 1.475e-06 1.616e-06 1.812e-06 0.00% DistributionMapping::Distribute() 1 9.32e-07 1.185e-06 1.562e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.681 3.683 3.683 100.00% Amr::coarseTimeStep() 10 3.482 3.483 3.483 94.54% Amr::timeStep() 10 3.471 3.472 3.473 94.29% Castro::advance() 10 3.455 3.456 3.456 93.83% Castro::subcycle_advance_ctu() 10 3.382 3.384 3.389 92.00% Castro::do_advance_ctu() 10 3.382 3.384 3.389 92.00% Castro::construct_ctu_hydro_source() 10 2.14 2.448 2.533 68.78% Gravity::make_radial_gravity() 21 0.339 0.3538 0.3822 10.38% Gravity::get_new_grav_vector() 11 0.2315 0.2341 0.2359 6.41% Castro::construct_old_gravity() 10 0.1988 0.2126 0.2334 6.34% Gravity::get_old_grav_vector() 10 0.1978 0.2118 0.2329 6.32% FillPatchIterator::Initialize 41 0.1884 0.1975 0.2159 5.86% Castro::construct_new_gravity() 10 0.2075 0.209 0.2106 5.72% Castro::initialize_do_advance() 10 0.1655 0.1794 0.1883 5.11% FillPatchSingleLevel 41 0.1359 0.1492 0.1873 5.08% Amr::init() 1 0.1827 0.1829 0.1829 4.97% Amr::initialInit() 1 0.1658 0.1659 0.1662 4.51% FabArray::ParallelCopy() 41 0.09141 0.1066 0.1503 4.08% Amr::InitializeInit() 1 0.06086 0.1011 0.1377 3.74% Amr::defBaseLevel() 1 0.06086 0.1011 0.1377 3.74% Castro::expand_state() 10 0.1268 0.1304 0.1375 3.73% FabArray::ParallelCopy_finish() 41 0.04051 0.05999 0.1224 3.32% Castro::initData() 1 0.04363 0.08363 0.1204 3.27% Castro::clean_state() 62 0.1126 0.1171 0.1198 3.25% Amr::FinalizeInit() 1 0.02833 0.06486 0.1051 2.85% Castro::estTimeStep() 21 0.02812 0.06523 0.1037 2.81% Castro::computeInitialDt() 2 0.001732 0.0383 0.07854 2.13% Castro::initialize_advance() 10 0.06617 0.07168 0.07401 2.01% FabArray::setVal() 143 0.05784 0.06939 0.07282 1.98% Castro::computeTemp() 63 0.0667 0.06941 0.07142 1.94% Castro::do_new_sources() 10 0.05388 0.06334 0.06513 1.77% FabArray::ParallelCopy_nowait() 41 0.02781 0.0465 0.05229 1.42% Castro::reset_internal_energy(MultiFab) 63 0.04875 0.05033 0.05157 1.40% Castro::reset_internal_energy(Fab) 1008 0.04844 0.05003 0.05128 1.39% Castro::do_old_sources() 10 0.03288 0.04548 0.04909 1.33% StateDataPhysBCFunct::() 41 0.03684 0.04253 0.04655 1.26% StateData::FillBoundary(geom) 41 0.03672 0.04241 0.04641 1.26% Castro::normalize_species() 62 0.04081 0.04174 0.04275 1.16% Castro::construct_new_source() 50 0.02459 0.02933 0.03079 0.84% Gravity::interpolate_monopole_grav() 21 0.02697 0.0277 0.02819 0.77% Amr::writePlotFile() 2 0.02723 0.02743 0.02762 0.75% Castro::post_init() 1 0.02572 0.0259 0.02616 0.71% Castro::construct_new_gravity_source() 10 0.01986 0.02271 0.0236 0.64% VisMF::Write(FabArray) 2 0.01296 0.01365 0.01726 0.47% Castro::apply_source_to_state() 20 0.008022 0.01463 0.01691 0.46% MultiFab::Saxpy() 20 0.007979 0.01457 0.01685 0.46% Castro::post_timestep() 10 0.01531 0.01626 0.01679 0.46% Castro::check_for_nan() 20 0.009692 0.0115 0.01295 0.35% FabArray::setDomainBndry() 41 0.004791 0.01105 0.01294 0.35% MultiFab::contains_nan() 20 0.009671 0.01147 0.01292 0.35% Castro::Castro() 1 0.01108 0.01146 0.01238 0.34% Castro::construct_old_source() 50 0.004741 0.01018 0.01191 0.32% Castro::construct_old_gravity_source() 10 0.004703 0.01011 0.01183 0.32% Castro::initMFs() 1 0.006805 0.007078 0.008772 0.24% Castro::computeNewDt() 9 0.007351 0.007356 0.007362 0.20% Castro::enforce_min_density() 62 0.005897 0.00671 0.007215 0.20% AmrLevel::AmrLevel(dm) 1 0.005567 0.005762 0.00637 0.17% StateData::define() 4 0.005553 0.00575 0.006358 0.17% Castro::swap_state_time_levels() 10 0.003298 0.004478 0.004777 0.13% Castro::buildMetrics() 1 0.001699 0.001782 0.002009 0.05% Castro::finalize_do_advance() 10 0.0006556 0.001572 0.001902 0.05% Castro::post_regrid() 1 0.001537 0.001594 0.001653 0.04% Amr::InitAmr() 1 0.0002747 0.0003192 0.0004684 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.26e-05 0.0001748 0.0002178 0.01% DistributionMapping::LeastUsedCPUs() 1 7.658e-06 0.0001691 0.0002114 0.01% Castro::enforce_consistent_e() 1 7.915e-05 8.813e-05 0.0001025 0.00% FabArrayBase::getCPC() 41 7.178e-05 8.435e-05 9.683e-05 0.00% Amr::writeSmallPlotFile() 1 3.042e-05 6.016e-05 7.181e-05 0.00% Castro::finalize_advance() 10 5.357e-05 6.384e-05 6.846e-05 0.00% Castro::enforce_speed_limit() 62 2.197e-05 2.843e-05 3.39e-05 0.00% FabArrayBase::CPC::define() 2 2.168e-05 2.722e-05 3.181e-05 0.00% Gravity::swapTimeLevels() 10 7.358e-06 1.366e-05 1.696e-05 0.00% Castro::create_source_corrector() 10 5.891e-06 1.117e-05 1.629e-05 0.00% Gravity::set_mass_offset() 10 6.159e-06 1.034e-05 1.238e-05 0.00% Castro::FluxRegCrseInit 10 6.485e-06 8.265e-06 1.044e-05 0.00% Amr::initSubcycle() 1 7.995e-06 8.664e-06 9.711e-06 0.00% Castro::retry_advance_ctu() 10 4.531e-06 5.941e-06 7.159e-06 0.00% Castro::FluxRegFineAdd() 10 1.555e-06 2.181e-06 2.754e-06 0.00% DistributionMapping::Distribute() 1 9.32e-07 1.185e-06 1.562e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.09-9-g67384701a808) finalized