MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.09-9-g67384701a808) initialized Starting run at 05:39:23 UTC on 2022-09-12. Successfully read inputs file ... Castro git describe: 22.09 AMReX git describe: 22.09-9-g67384701a Microphysics git describe: 22.08-12-g91211ba4 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01728386 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.370724102 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.343810759 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.34165164 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342159091 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.353485297 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.351890215 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.337621302 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.337321414 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.337273459 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.337262796 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010377983 seconds Ending run at 05:39:27 UTC on 2022-09-12. Run time = 3.671202939 Run time without initialization = 3.471188735 Average number of zones advanced per microsecond: 0.755 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.671 ... 3.671 ... 3.671 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1538 2.4101 2.5088 68.34% Castro::do_advance_ctu() 10 0.04032 0.1405 0.4009 10.92% Gravity::make_radial_gravity() 21 0.3407 0.3568 0.3833 10.44% Castro::initData() 1 0.03931 0.08131 0.1286 3.50% Castro::estTimeStep() 21 0.04116 0.07837 0.1187 3.23% FabArray::ParallelCopy_finish() 41 0.04586 0.06299 0.1143 3.11% FabArray::setVal() 143 0.06279 0.07093 0.07312 1.99% Castro::reset_internal_energy(Fab) 1008 0.04745 0.04975 0.05179 1.41% FabArray::ParallelCopy_nowait() 41 0.02808 0.04489 0.05075 1.38% StateData::FillBoundary(geom) 41 0.03505 0.0422 0.04633 1.26% Castro::normalize_species() 62 0.04047 0.04169 0.04277 1.16% FillPatchIterator::Initialize 41 0.02448 0.03584 0.03981 1.08% Gravity::interpolate_monopole_grav() 21 0.0267 0.0276 0.02822 0.77% Castro::construct_new_gravity_source() 10 0.01973 0.02292 0.02426 0.66% Castro::expand_state() 10 0.009948 0.01859 0.02174 0.59% Castro::computeTemp() 63 0.0176 0.01888 0.02017 0.55% Castro::initialize_do_advance() 10 0.01023 0.01735 0.01934 0.53% VisMF::Write(FabArray) 2 0.0126 0.01353 0.01711 0.47% MultiFab::Saxpy() 20 0.008712 0.01438 0.01611 0.44% Amr::writePlotFile() 2 0.01077 0.01443 0.01535 0.42% MultiFab::contains_nan() 20 0.009545 0.01123 0.01305 0.36% Gravity::get_new_grav_vector() 11 0.007437 0.01131 0.01284 0.35% FabArray::setDomainBndry() 41 0.004696 0.01032 0.01221 0.33% Castro::construct_old_gravity_source() 10 0.004937 0.01013 0.01179 0.32% Castro::initialize_advance() 10 0.01092 0.01112 0.01147 0.31% Gravity::get_old_grav_vector() 10 0.005767 0.009429 0.01105 0.30% Castro::initMFs() 1 0.006566 0.007017 0.008306 0.23% Castro::enforce_min_density() 62 0.005953 0.006667 0.007151 0.19% Castro::construct_new_source() 50 0.004878 0.006551 0.007146 0.19% main() 1 0.006303 0.006738 0.00701 0.19% StateData::define() 4 0.005533 0.005739 0.006282 0.17% Castro::swap_state_time_levels() 10 0.003661 0.004421 0.004617 0.13% Amr::coarseTimeStep() 10 0.0007711 0.001762 0.003344 0.09% Castro::buildMetrics() 1 0.001533 0.001613 0.001823 0.05% Castro::finalize_do_advance() 10 0.0006454 0.001438 0.001721 0.05% Amr::InitAmr() 1 0.0002567 0.0002947 0.000468 0.01% Amr::timeStep() 10 0.000188 0.0002405 0.0004053 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002807 0.0002897 0.0003094 0.01% DistributionMapping::LeastUsedCPUs() 1 6.838e-06 0.0001914 0.0002309 0.01% Castro::clean_state() 62 0.0001548 0.0001688 0.0001897 0.01% StateDataPhysBCFunct::() 41 9.351e-05 0.0001178 0.0001388 0.00% FabArray::ParallelCopy() 41 7.852e-05 9.022e-05 0.0001074 0.00% Castro::do_old_sources() 10 4.168e-05 7.218e-05 9.721e-05 0.00% Castro::enforce_consistent_e() 1 8.226e-05 8.788e-05 9.461e-05 0.00% Castro::do_new_sources() 10 4.592e-05 7.191e-05 8.83e-05 0.00% Castro::Castro() 1 4.995e-05 6.474e-05 8.716e-05 0.00% Castro::construct_old_source() 50 3.301e-05 7.269e-05 8.699e-05 0.00% FillPatchSingleLevel 41 6.736e-05 7.221e-05 7.658e-05 0.00% Amr::FinalizeInit() 1 3.375e-06 1.326e-05 7.616e-05 0.00% FabArrayBase::getCPC() 41 4.726e-05 5.546e-05 7.469e-05 0.00% Amr::writeSmallPlotFile() 1 2.432e-05 5.014e-05 7.016e-05 0.00% Castro::construct_old_gravity() 10 3.686e-05 5.574e-05 6.563e-05 0.00% Castro::apply_source_to_state() 20 3.753e-05 5.198e-05 6.322e-05 0.00% Castro::subcycle_advance_ctu() 10 3.039e-05 4.539e-05 5.753e-05 0.00% Castro::construct_new_gravity() 10 3.84e-05 4.846e-05 5.703e-05 0.00% Castro::finalize_advance() 10 4.609e-05 5.035e-05 5.496e-05 0.00% Castro::advance() 10 3.302e-05 4.48e-05 5.294e-05 0.00% Amr::defBaseLevel() 1 3.235e-05 3.823e-05 4.539e-05 0.00% FabArrayBase::CPC::define() 2 2.212e-05 2.727e-05 3.797e-05 0.00% Castro::enforce_speed_limit() 62 2.221e-05 2.713e-05 3.083e-05 0.00% Castro::check_for_nan() 20 2.074e-05 2.406e-05 2.726e-05 0.00% Castro::post_timestep() 10 1.306e-05 1.504e-05 1.678e-05 0.00% Gravity::swapTimeLevels() 10 6.302e-06 1.223e-05 1.449e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.772e-06 1.058e-05 1.427e-05 0.00% Castro::create_source_corrector() 10 6.912e-06 1.122e-05 1.33e-05 0.00% Castro::computeNewDt() 9 8.154e-06 9.791e-06 1.123e-05 0.00% Castro::FluxRegCrseInit 10 4.321e-06 7.718e-06 1.053e-05 0.00% Gravity::set_mass_offset() 10 6.292e-06 8.947e-06 1.005e-05 0.00% Amr::initSubcycle() 1 8.014e-06 8.542e-06 9.257e-06 0.00% Castro::retry_advance_ctu() 10 3.968e-06 5.778e-06 7.115e-06 0.00% Amr::InitializeInit() 1 1.941e-06 3.916e-06 6.391e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.411e-06 3.942e-06 5.191e-06 0.00% Castro::computeInitialDt() 2 2.811e-06 3.438e-06 3.915e-06 0.00% Castro::post_init() 1 2.872e-06 3.408e-06 3.823e-06 0.00% Castro::post_regrid() 1 1.826e-06 2.633e-06 3.787e-06 0.00% Castro::FluxRegFineAdd() 10 1.771e-06 2.086e-06 2.446e-06 0.00% Amr::init() 1 1.436e-06 1.865e-06 2.334e-06 0.00% Amr::initialInit() 1 1.323e-06 1.649e-06 2.314e-06 0.00% DistributionMapping::Distribute() 1 9.08e-07 1.025e-06 1.158e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.671 3.671 3.671 100.00% Amr::coarseTimeStep() 10 3.454 3.454 3.454 94.08% Amr::timeStep() 10 3.442 3.444 3.445 93.83% Castro::advance() 10 3.427 3.428 3.428 93.37% Castro::subcycle_advance_ctu() 10 3.352 3.354 3.356 91.40% Castro::do_advance_ctu() 10 3.352 3.354 3.355 91.40% Castro::construct_ctu_hydro_source() 10 2.154 2.41 2.509 68.34% Gravity::make_radial_gravity() 21 0.3407 0.3568 0.3833 10.44% Gravity::get_new_grav_vector() 11 0.2274 0.233 0.2346 6.39% Castro::construct_old_gravity() 10 0.2 0.2144 0.2344 6.38% Gravity::get_old_grav_vector() 10 0.1991 0.2136 0.2338 6.37% FillPatchIterator::Initialize 41 0.1909 0.1966 0.2092 5.70% Castro::construct_new_gravity() 10 0.2003 0.205 0.2064 5.62% Amr::init() 1 0.1994 0.1996 0.1996 5.44% Castro::initialize_do_advance() 10 0.1618 0.1791 0.188 5.12% Amr::initialInit() 1 0.1817 0.1821 0.1828 4.98% FillPatchSingleLevel 41 0.1392 0.1505 0.18 4.90% Amr::InitializeInit() 1 0.06002 0.1024 0.1507 4.11% Amr::defBaseLevel() 1 0.06002 0.1024 0.1507 4.11% FabArray::ParallelCopy() 41 0.09643 0.1081 0.1425 3.88% Castro::expand_state() 10 0.1214 0.1315 0.1383 3.77% Castro::initData() 1 0.04343 0.08537 0.1323 3.60% Amr::FinalizeInit() 1 0.03204 0.07964 0.1218 3.32% Castro::clean_state() 62 0.111 0.1165 0.1206 3.28% Castro::estTimeStep() 21 0.04116 0.07837 0.1187 3.23% FabArray::ParallelCopy_finish() 41 0.04586 0.06299 0.1143 3.11% Castro::computeInitialDt() 2 0.001731 0.05002 0.09246 2.52% Castro::initialize_advance() 10 0.07157 0.07383 0.07599 2.07% FabArray::setVal() 143 0.06279 0.07093 0.07312 1.99% Castro::computeTemp() 63 0.06538 0.06892 0.07183 1.96% Castro::do_new_sources() 10 0.05408 0.06327 0.06528 1.78% Castro::reset_internal_energy(MultiFab) 63 0.04775 0.05004 0.05208 1.42% Castro::reset_internal_energy(Fab) 1008 0.04745 0.04975 0.05179 1.41% FabArray::ParallelCopy_nowait() 41 0.02817 0.04498 0.05083 1.38% Castro::do_old_sources() 10 0.03298 0.04536 0.04953 1.35% StateDataPhysBCFunct::() 41 0.03516 0.04232 0.04647 1.27% StateData::FillBoundary(geom) 41 0.03505 0.0422 0.04633 1.26% Castro::normalize_species() 62 0.04047 0.04169 0.04277 1.16% Castro::construct_new_source() 50 0.02461 0.02947 0.03082 0.84% Castro::post_init() 1 0.0285 0.02891 0.02965 0.81% Amr::writePlotFile() 2 0.02728 0.02796 0.02838 0.77% Gravity::interpolate_monopole_grav() 21 0.0267 0.0276 0.02822 0.77% Castro::construct_new_gravity_source() 10 0.01973 0.02292 0.02426 0.66% VisMF::Write(FabArray) 2 0.0126 0.01353 0.01711 0.47% Castro::post_timestep() 10 0.01508 0.01584 0.01671 0.46% Castro::apply_source_to_state() 20 0.008749 0.01443 0.01617 0.44% MultiFab::Saxpy() 20 0.008712 0.01438 0.01611 0.44% Castro::check_for_nan() 20 0.009567 0.01126 0.01308 0.36% MultiFab::contains_nan() 20 0.009545 0.01123 0.01305 0.36% FabArray::setDomainBndry() 41 0.004696 0.01032 0.01221 0.33% Castro::Castro() 1 0.01074 0.01106 0.01193 0.32% Castro::construct_old_source() 50 0.00497 0.0102 0.01187 0.32% Castro::construct_old_gravity_source() 10 0.004937 0.01013 0.01179 0.32% Castro::initMFs() 1 0.006566 0.007017 0.008306 0.23% Castro::computeNewDt() 9 0.007375 0.00739 0.007401 0.20% Castro::enforce_min_density() 62 0.005953 0.006667 0.007151 0.19% AmrLevel::AmrLevel(dm) 1 0.005541 0.00575 0.00629 0.17% StateData::define() 4 0.005533 0.005739 0.006282 0.17% Castro::swap_state_time_levels() 10 0.003661 0.004421 0.004617 0.13% Castro::buildMetrics() 1 0.001648 0.001742 0.00197 0.05% Castro::post_regrid() 1 0.001568 0.001643 0.001878 0.05% Castro::finalize_do_advance() 10 0.0006454 0.001438 0.001721 0.05% Amr::InitAmr() 1 0.000265 0.0003032 0.0004773 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.183e-05 0.0001964 0.0002372 0.01% DistributionMapping::LeastUsedCPUs() 1 6.838e-06 0.0001914 0.0002309 0.01% FabArrayBase::getCPC() 41 7.373e-05 8.272e-05 9.871e-05 0.00% Castro::enforce_consistent_e() 1 8.226e-05 8.788e-05 9.461e-05 0.00% Amr::writeSmallPlotFile() 1 2.432e-05 5.014e-05 7.016e-05 0.00% Castro::finalize_advance() 10 5.279e-05 6.015e-05 6.487e-05 0.00% FabArrayBase::CPC::define() 2 2.212e-05 2.727e-05 3.797e-05 0.00% Castro::enforce_speed_limit() 62 2.221e-05 2.713e-05 3.083e-05 0.00% Gravity::swapTimeLevels() 10 6.302e-06 1.223e-05 1.449e-05 0.00% Castro::create_source_corrector() 10 6.912e-06 1.122e-05 1.33e-05 0.00% Castro::FluxRegCrseInit 10 4.321e-06 7.718e-06 1.053e-05 0.00% Gravity::set_mass_offset() 10 6.292e-06 8.947e-06 1.005e-05 0.00% Amr::initSubcycle() 1 8.014e-06 8.542e-06 9.257e-06 0.00% Castro::retry_advance_ctu() 10 3.968e-06 5.778e-06 7.115e-06 0.00% Castro::FluxRegFineAdd() 10 1.771e-06 2.086e-06 2.446e-06 0.00% DistributionMapping::Distribute() 1 9.08e-07 1.025e-06 1.158e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.09-9-g67384701a808) finalized