MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.09-11-g9aa23c202a13) initialized Starting run at 05:39:28 UTC on 2022-09-14. Successfully read inputs file ... Castro git describe: 22.09 AMReX git describe: 22.09-11-g9aa23c202 Microphysics git describe: 22.08-13-g1adf1bdb reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015231442 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.368235903 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.345125737 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.34294728 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.343861752 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.354987788 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.353131188 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338479678 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339054697 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.338701385 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339501748 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.490858842 seconds Ending run at 05:39:33 UTC on 2022-09-14. Run time = 4.163421168 Run time without initialization = 3.9628089 Average number of zones advanced per microsecond: 0.662 Average number of zones advanced per microsecond per rank: 0.083 TinyProfiler total time across processes [min...avg...max]: 4.161 ... 4.163 ... 4.163 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1407 2.4187 2.5207 60.54% Amr::writePlotFile() 2 0.4907 0.4934 0.4941 11.87% Castro::do_advance_ctu() 10 0.04087 0.1429 0.4251 10.21% Gravity::make_radial_gravity() 21 0.3386 0.351 0.3694 8.87% Castro::initData() 1 0.03944 0.08633 0.1295 3.11% Castro::estTimeStep() 21 0.02745 0.07571 0.1254 3.01% FabArray::ParallelCopy_finish() 41 0.04626 0.06235 0.1074 2.58% FabArray::setVal() 143 0.07064 0.07177 0.07223 1.73% Castro::reset_internal_energy(Fab) 1008 0.04825 0.05008 0.05203 1.25% FabArray::ParallelCopy_nowait() 41 0.03155 0.04529 0.05037 1.21% StateData::FillBoundary(geom) 41 0.03593 0.04172 0.04573 1.10% Castro::normalize_species() 62 0.04031 0.04145 0.04322 1.04% FillPatchIterator::Initialize 41 0.02432 0.03623 0.04034 0.97% Gravity::interpolate_monopole_grav() 21 0.02599 0.02729 0.02778 0.67% Castro::construct_new_gravity_source() 10 0.02181 0.02352 0.02466 0.59% Castro::expand_state() 10 0.01049 0.01871 0.02251 0.54% Castro::computeTemp() 63 0.01764 0.01898 0.01998 0.48% Castro::initialize_do_advance() 10 0.01069 0.01755 0.01989 0.48% MultiFab::Saxpy() 20 0.01137 0.01491 0.01663 0.40% VisMF::Write(FabArray) 2 0.01206 0.01295 0.0156 0.37% Gravity::get_new_grav_vector() 11 0.01031 0.01205 0.01295 0.31% FabArray::setDomainBndry() 41 0.005022 0.01045 0.01249 0.30% Castro::construct_old_gravity_source() 10 0.005964 0.01058 0.01234 0.30% MultiFab::contains_nan() 20 0.01042 0.01134 0.01226 0.29% Castro::initialize_advance() 10 0.01064 0.01087 0.01121 0.27% Gravity::get_old_grav_vector() 10 0.006246 0.009514 0.01088 0.26% Castro::initMFs() 1 0.006626 0.008284 0.009998 0.24% StateData::define() 4 0.005535 0.006852 0.008196 0.20% main() 1 0.004598 0.006829 0.007275 0.17% Castro::enforce_min_density() 62 0.006375 0.006749 0.007181 0.17% Castro::construct_new_source() 50 0.005186 0.006586 0.00711 0.17% Castro::swap_state_time_levels() 10 0.003433 0.004575 0.004751 0.11% Amr::coarseTimeStep() 10 0.0008432 0.001495 0.00282 0.07% Castro::buildMetrics() 1 0.001576 0.001952 0.002346 0.06% Castro::finalize_do_advance() 10 0.001131 0.001558 0.001745 0.04% Amr::InitAmr() 1 0.000241 0.0003932 0.0005106 0.01% Amr::timeStep() 10 0.0001718 0.0002185 0.0003759 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000294 0.0003077 0.000332 0.01% DistributionMapping::LeastUsedCPUs() 1 6.734e-06 0.0001328 0.0002886 0.01% Castro::clean_state() 62 0.0001513 0.0001747 0.0001939 0.00% StateDataPhysBCFunct::() 41 0.0001026 0.0001321 0.0001523 0.00% Amr::FinalizeInit() 1 4.226e-06 1.732e-05 0.0001051 0.00% Castro::enforce_consistent_e() 1 7.529e-05 8.959e-05 0.0001046 0.00% FabArray::ParallelCopy() 41 7.349e-05 8.879e-05 0.0001019 0.00% Castro::do_new_sources() 10 5.299e-05 7.373e-05 9.827e-05 0.00% Castro::do_old_sources() 10 4.16e-05 7.292e-05 9.638e-05 0.00% Castro::construct_old_source() 50 3.782e-05 7.337e-05 8.943e-05 0.00% Castro::subcycle_advance_ctu() 10 3.625e-05 5.411e-05 8.688e-05 0.00% Castro::Castro() 1 5.568e-05 6.689e-05 7.782e-05 0.00% FillPatchSingleLevel 41 6.722e-05 7.046e-05 7.564e-05 0.00% FabArrayBase::getCPC() 41 4.85e-05 5.65e-05 7.193e-05 0.00% Amr::writeSmallPlotFile() 1 2.481e-05 6.176e-05 6.983e-05 0.00% Castro::apply_source_to_state() 20 4.234e-05 5.355e-05 6.951e-05 0.00% Castro::construct_old_gravity() 10 3.81e-05 5.241e-05 6.772e-05 0.00% Castro::finalize_advance() 10 4.79e-05 5.082e-05 5.569e-05 0.00% Castro::advance() 10 3.422e-05 4.541e-05 5.369e-05 0.00% Castro::construct_new_gravity() 10 4.182e-05 4.648e-05 5.302e-05 0.00% Amr::defBaseLevel() 1 3.624e-05 3.848e-05 4.54e-05 0.00% Castro::enforce_speed_limit() 62 2.653e-05 3.175e-05 4.31e-05 0.00% FabArrayBase::CPC::define() 2 2.389e-05 2.654e-05 3.251e-05 0.00% Castro::post_timestep() 10 1.426e-05 1.82e-05 2.87e-05 0.00% Castro::check_for_nan() 20 1.881e-05 2.403e-05 2.685e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.529e-06 1.064e-05 2.128e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.809e-06 1.364e-05 1.868e-05 0.00% Gravity::swapTimeLevels() 10 6.749e-06 1.177e-05 1.573e-05 0.00% Amr::initSubcycle() 1 7.919e-06 1.152e-05 1.484e-05 0.00% Castro::create_source_corrector() 10 6.428e-06 1.138e-05 1.452e-05 0.00% Castro::computeNewDt() 9 8.264e-06 1.049e-05 1.296e-05 0.00% Castro::FluxRegCrseInit 10 6.305e-06 9.327e-06 1.254e-05 0.00% Gravity::set_mass_offset() 10 6.105e-06 8.936e-06 1.083e-05 0.00% Castro::retry_advance_ctu() 10 3.927e-06 6.439e-06 8.07e-06 0.00% Amr::InitializeInit() 1 1.824e-06 3.92e-06 8.023e-06 0.00% Castro::post_init() 1 3.069e-06 3.981e-06 5.269e-06 0.00% Castro::computeInitialDt() 2 3.227e-06 3.923e-06 5.158e-06 0.00% Castro::post_regrid() 1 1.748e-06 2.918e-06 4.421e-06 0.00% Amr::init() 1 1.727e-06 2.555e-06 3.502e-06 0.00% Castro::FluxRegFineAdd() 10 1.795e-06 2.397e-06 3.211e-06 0.00% Amr::initialInit() 1 1.532e-06 1.912e-06 2.688e-06 0.00% DistributionMapping::Distribute() 1 8.67e-07 1.183e-06 1.416e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 4.161 4.163 4.163 100.00% Amr::coarseTimeStep() 10 3.465 3.465 3.465 83.22% Amr::timeStep() 10 3.454 3.455 3.456 83.00% Castro::advance() 10 3.439 3.439 3.44 82.61% Castro::subcycle_advance_ctu() 10 3.364 3.366 3.368 80.89% Castro::do_advance_ctu() 10 3.364 3.366 3.368 80.89% Castro::construct_ctu_hydro_source() 10 2.141 2.419 2.521 60.54% Amr::writePlotFile() 2 0.5062 0.5063 0.5066 12.17% Gravity::make_radial_gravity() 21 0.3386 0.351 0.3694 8.87% Gravity::get_new_grav_vector() 11 0.2249 0.2298 0.2324 5.58% Castro::construct_old_gravity() 10 0.2008 0.2123 0.2278 5.47% Gravity::get_old_grav_vector() 10 0.1999 0.2115 0.2271 5.46% Castro::construct_new_gravity() 10 0.2007 0.2049 0.2071 4.98% FillPatchIterator::Initialize 41 0.1892 0.1964 0.2061 4.95% Amr::init() 1 0.1999 0.2 0.2002 4.81% Castro::initialize_do_advance() 10 0.1635 0.179 0.187 4.49% Amr::initialInit() 1 0.1846 0.1847 0.1849 4.44% FillPatchSingleLevel 41 0.1377 0.1497 0.1768 4.25% Amr::InitializeInit() 1 0.0592 0.1096 0.1563 3.75% Amr::defBaseLevel() 1 0.0592 0.1096 0.1563 3.75% FabArray::ParallelCopy() 41 0.09611 0.1078 0.1391 3.34% Castro::expand_state() 10 0.1235 0.1312 0.1371 3.29% Castro::initData() 1 0.04308 0.09018 0.1334 3.20% Amr::FinalizeInit() 1 0.02837 0.07503 0.1255 3.01% Castro::estTimeStep() 21 0.02745 0.07571 0.1254 3.01% Castro::clean_state() 62 0.1127 0.1168 0.1194 2.87% FabArray::ParallelCopy_finish() 41 0.04626 0.06235 0.1074 2.58% Castro::computeInitialDt() 2 0.001713 0.0485 0.09911 2.38% Castro::initialize_advance() 10 0.07139 0.07346 0.07486 1.80% Castro::computeTemp() 63 0.06621 0.06937 0.07228 1.74% FabArray::setVal() 143 0.07064 0.07177 0.07223 1.73% Castro::do_new_sources() 10 0.06322 0.06512 0.06586 1.58% Castro::reset_internal_energy(MultiFab) 63 0.04858 0.05039 0.05234 1.26% Castro::reset_internal_energy(Fab) 1008 0.04825 0.05008 0.05203 1.25% FabArray::ParallelCopy_nowait() 41 0.03163 0.04538 0.05045 1.21% Castro::do_old_sources() 10 0.03732 0.04666 0.05023 1.21% StateDataPhysBCFunct::() 41 0.03603 0.04185 0.04587 1.10% StateData::FillBoundary(geom) 41 0.03593 0.04172 0.04573 1.10% Castro::normalize_species() 62 0.04031 0.04145 0.04322 1.04% Castro::construct_new_source() 50 0.02699 0.03011 0.03093 0.74% Gravity::interpolate_monopole_grav() 21 0.02599 0.02729 0.02778 0.67% Castro::post_init() 1 0.0256 0.02583 0.02598 0.62% Castro::construct_new_gravity_source() 10 0.02181 0.02352 0.02466 0.59% Castro::apply_source_to_state() 20 0.01141 0.01496 0.0167 0.40% MultiFab::Saxpy() 20 0.01137 0.01491 0.01663 0.40% Castro::post_timestep() 10 0.01479 0.01571 0.01639 0.39% VisMF::Write(FabArray) 2 0.01206 0.01295 0.0156 0.37% Castro::Castro() 1 0.01022 0.01241 0.01468 0.35% FabArray::setDomainBndry() 41 0.005022 0.01045 0.01249 0.30% Castro::construct_old_source() 50 0.006001 0.01065 0.01242 0.30% Castro::construct_old_gravity_source() 10 0.005964 0.01058 0.01234 0.30% Castro::check_for_nan() 20 0.01044 0.01136 0.01229 0.30% MultiFab::contains_nan() 20 0.01042 0.01134 0.01226 0.29% Castro::initMFs() 1 0.006626 0.008284 0.009998 0.24% AmrLevel::AmrLevel(dm) 1 0.005543 0.006866 0.008215 0.20% StateData::define() 4 0.005535 0.006852 0.008196 0.20% Castro::enforce_min_density() 62 0.006375 0.006749 0.007181 0.17% Castro::computeNewDt() 9 0.007103 0.007115 0.007124 0.17% Castro::swap_state_time_levels() 10 0.003433 0.004575 0.004751 0.11% Castro::buildMetrics() 1 0.001693 0.002117 0.002554 0.06% Castro::finalize_do_advance() 10 0.001131 0.001558 0.001745 0.04% Castro::post_regrid() 1 0.001567 0.001606 0.001658 0.04% Amr::InitAmr() 1 0.0002501 0.0004047 0.0005245 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.219e-05 0.0001446 0.0003107 0.01% DistributionMapping::LeastUsedCPUs() 1 6.734e-06 0.0001328 0.0002886 0.01% Castro::enforce_consistent_e() 1 7.529e-05 8.959e-05 0.0001046 0.00% FabArrayBase::getCPC() 41 7.277e-05 8.304e-05 9.916e-05 0.00% Amr::writeSmallPlotFile() 1 2.481e-05 6.176e-05 6.983e-05 0.00% Castro::finalize_advance() 10 5.632e-05 6.255e-05 6.767e-05 0.00% Castro::enforce_speed_limit() 62 2.653e-05 3.175e-05 4.31e-05 0.00% FabArrayBase::CPC::define() 2 2.389e-05 2.654e-05 3.251e-05 0.00% Gravity::swapTimeLevels() 10 6.749e-06 1.177e-05 1.573e-05 0.00% Amr::initSubcycle() 1 7.919e-06 1.152e-05 1.484e-05 0.00% Castro::create_source_corrector() 10 6.428e-06 1.138e-05 1.452e-05 0.00% Castro::FluxRegCrseInit 10 6.305e-06 9.327e-06 1.254e-05 0.00% Gravity::set_mass_offset() 10 6.105e-06 8.936e-06 1.083e-05 0.00% Castro::retry_advance_ctu() 10 3.927e-06 6.439e-06 8.07e-06 0.00% Castro::FluxRegFineAdd() 10 1.795e-06 2.397e-06 3.211e-06 0.00% DistributionMapping::Distribute() 1 8.67e-07 1.183e-06 1.416e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.09-11-g9aa23c202a13) finalized