MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.09-13-g17c94cc196d7) initialized Starting run at 05:39:54 UTC on 2022-09-15. Successfully read inputs file ... Castro git describe: 22.09 AMReX git describe: 22.09-13-g17c94cc19 Microphysics git describe: 22.08-13-g1adf1bdb reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016311165 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.356988617 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.346197285 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.345462739 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.346493291 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.354634763 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.355129639 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.34027227 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.342189219 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.340825711 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.34149287 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010453429 seconds Ending run at 05:39:58 UTC on 2022-09-15. Run time = 3.672639187 Run time without initialization = 3.487965378 Average number of zones advanced per microsecond: 0.752 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.67 ... 3.672 ... 3.673 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1283 2.4270 2.5364 69.06% Castro::do_advance_ctu() 10 0.03092 0.1409 0.4423 12.04% Gravity::make_radial_gravity() 21 0.3411 0.3551 0.3836 10.44% FabArray::ParallelCopy_finish() 41 0.04193 0.06209 0.1207 3.29% Castro::initData() 1 0.04155 0.07989 0.1167 3.18% Castro::estTimeStep() 21 0.02756 0.06666 0.1069 2.91% FabArray::setVal() 143 0.06142 0.07048 0.07269 1.98% Castro::reset_internal_energy(Fab) 1008 0.04711 0.0501 0.05155 1.40% FabArray::ParallelCopy_nowait() 41 0.02826 0.04517 0.05097 1.39% StateData::FillBoundary(geom) 41 0.03439 0.04179 0.04608 1.25% Castro::normalize_species() 62 0.03983 0.04125 0.04177 1.14% FillPatchIterator::Initialize 41 0.02369 0.03621 0.0404 1.10% Gravity::interpolate_monopole_grav() 21 0.02629 0.02749 0.02789 0.76% Castro::construct_new_gravity_source() 10 0.02006 0.02298 0.02373 0.65% Castro::expand_state() 10 0.00974 0.01935 0.02324 0.63% Castro::computeTemp() 63 0.01706 0.01921 0.01984 0.54% Castro::initialize_do_advance() 10 0.009381 0.0174 0.01907 0.52% VisMF::Write(FabArray) 2 0.0128 0.01366 0.01752 0.48% MultiFab::Saxpy() 20 0.008608 0.0145 0.01656 0.45% Amr::writePlotFile() 2 0.009478 0.01351 0.0147 0.40% Gravity::get_new_grav_vector() 11 0.007711 0.01162 0.01287 0.35% FabArray::setDomainBndry() 41 0.004919 0.01035 0.01242 0.34% MultiFab::contains_nan() 20 0.009419 0.01084 0.01201 0.33% Castro::construct_old_gravity_source() 10 0.004919 0.01006 0.01175 0.32% Castro::initialize_advance() 10 0.01073 0.01094 0.01137 0.31% Gravity::get_old_grav_vector() 10 0.005508 0.009618 0.01111 0.30% Castro::initMFs() 1 0.006536 0.006964 0.008267 0.23% Castro::construct_new_source() 50 0.004758 0.006558 0.007233 0.20% Castro::enforce_min_density() 62 0.006018 0.006712 0.007129 0.19% main() 1 0.004537 0.006513 0.007052 0.19% StateData::define() 4 0.005483 0.00571 0.006245 0.17% Castro::swap_state_time_levels() 10 0.003273 0.004276 0.004621 0.13% Amr::coarseTimeStep() 10 0.001064 0.001425 0.002188 0.06% Castro::buildMetrics() 1 0.001543 0.001607 0.001805 0.05% Castro::finalize_do_advance() 10 0.0006527 0.001452 0.00169 0.05% Amr::InitAmr() 1 0.0002536 0.0003492 0.0006123 0.02% DistributionMapping::LeastUsedCPUs() 1 8.121e-06 0.0003554 0.0004817 0.01% Amr::timeStep() 10 0.0001771 0.000237 0.0004374 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002903 0.0003028 0.0003273 0.01% Castro::clean_state() 62 0.0001494 0.0001727 0.0001993 0.01% StateDataPhysBCFunct::() 41 0.0001028 0.0001345 0.0001565 0.00% Castro::enforce_consistent_e() 1 7.705e-05 8.981e-05 0.0001087 0.00% FabArray::ParallelCopy() 41 8.05e-05 8.922e-05 9.906e-05 0.00% Castro::Castro() 1 5.68e-05 7.011e-05 9.837e-05 0.00% Castro::construct_old_source() 50 3.885e-05 7.495e-05 9.7e-05 0.00% Castro::do_old_sources() 10 4.897e-05 7.354e-05 8.974e-05 0.00% Castro::do_new_sources() 10 4.795e-05 7.517e-05 8.779e-05 0.00% Castro::subcycle_advance_ctu() 10 3.871e-05 5.465e-05 8.151e-05 0.00% FillPatchSingleLevel 41 6.545e-05 7.176e-05 8.069e-05 0.00% Castro::construct_old_gravity() 10 4.252e-05 5.921e-05 7.788e-05 0.00% Amr::writeSmallPlotFile() 1 3.152e-05 5.836e-05 7.13e-05 0.00% Castro::advance() 10 3.464e-05 4.705e-05 7.105e-05 0.00% Castro::apply_source_to_state() 20 3.602e-05 5.702e-05 7.069e-05 0.00% Amr::FinalizeInit() 1 3.48e-06 1.303e-05 6.769e-05 0.00% Amr::defBaseLevel() 1 3.576e-05 5.145e-05 6.294e-05 0.00% FabArrayBase::getCPC() 41 5.116e-05 5.516e-05 6.192e-05 0.00% Castro::construct_new_gravity() 10 4.288e-05 5.043e-05 5.767e-05 0.00% Castro::finalize_advance() 10 4.952e-05 5.238e-05 5.479e-05 0.00% Castro::enforce_speed_limit() 62 2.782e-05 3.116e-05 3.608e-05 0.00% FabArrayBase::CPC::define() 2 2.358e-05 2.665e-05 3.199e-05 0.00% Castro::check_for_nan() 20 1.958e-05 2.363e-05 2.776e-05 0.00% Amr::initSubcycle() 1 7.968e-06 1.373e-05 2.738e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.498e-06 1.224e-05 2.599e-05 0.00% Castro::post_timestep() 10 1.216e-05 1.683e-05 2.388e-05 0.00% Gravity::swapTimeLevels() 10 6.944e-06 1.251e-05 1.591e-05 0.00% Castro::create_source_corrector() 10 8.885e-06 1.051e-05 1.206e-05 0.00% Castro::computeNewDt() 9 8.195e-06 9.798e-06 1.145e-05 0.00% Castro::FluxRegCrseInit 10 6.172e-06 8.376e-06 1.096e-05 0.00% Gravity::set_mass_offset() 10 6.962e-06 9.446e-06 1.09e-05 0.00% Amr::InitializeInit() 1 2.114e-06 4.982e-06 8.107e-06 0.00% Castro::retry_advance_ctu() 10 4.367e-06 5.939e-06 7.539e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.801e-06 4.779e-06 5.978e-06 0.00% Castro::computeInitialDt() 2 3.178e-06 3.904e-06 5.318e-06 0.00% Castro::post_init() 1 3.073e-06 3.823e-06 4.346e-06 0.00% Castro::post_regrid() 1 1.823e-06 2.932e-06 3.965e-06 0.00% Amr::init() 1 1.614e-06 1.971e-06 2.734e-06 0.00% Castro::FluxRegFineAdd() 10 1.898e-06 2.267e-06 2.523e-06 0.00% Amr::initialInit() 1 1.285e-06 1.75e-06 2.486e-06 0.00% DistributionMapping::Distribute() 1 8.77e-07 1.166e-06 1.806e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.67 3.672 3.673 100.00% Amr::coarseTimeStep() 10 3.47 3.47 3.47 94.49% Amr::timeStep() 10 3.46 3.461 3.461 94.25% Castro::advance() 10 3.444 3.445 3.445 93.80% Castro::subcycle_advance_ctu() 10 3.37 3.372 3.375 91.89% Castro::do_advance_ctu() 10 3.37 3.371 3.375 91.89% Castro::construct_ctu_hydro_source() 10 2.128 2.427 2.536 69.06% Gravity::make_radial_gravity() 21 0.3411 0.3551 0.3836 10.44% Gravity::get_new_grav_vector() 11 0.2285 0.2335 0.2351 6.40% Castro::construct_old_gravity() 10 0.2006 0.2127 0.2335 6.36% Gravity::get_old_grav_vector() 10 0.1996 0.2118 0.2329 6.34% FillPatchIterator::Initialize 41 0.1883 0.196 0.215 5.85% Castro::construct_new_gravity() 10 0.2038 0.2079 0.2091 5.69% Castro::initialize_do_advance() 10 0.1618 0.1786 0.1872 5.10% FillPatchSingleLevel 41 0.136 0.1494 0.1864 5.08% Amr::init() 1 0.1838 0.1842 0.1843 5.02% Amr::initialInit() 1 0.1667 0.1676 0.1687 4.59% FabArray::ParallelCopy() 41 0.09166 0.1074 0.1491 4.06% Amr::InitializeInit() 1 0.06229 0.1011 0.1386 3.77% Amr::defBaseLevel() 1 0.06229 0.1011 0.1386 3.77% Castro::expand_state() 10 0.1193 0.1309 0.1375 3.75% FabArray::ParallelCopy_finish() 41 0.04193 0.06209 0.1207 3.29% Castro::initData() 1 0.04562 0.08391 0.1206 3.28% Castro::clean_state() 62 0.1096 0.1168 0.1192 3.25% Castro::estTimeStep() 21 0.02756 0.06666 0.1069 2.91% Amr::FinalizeInit() 1 0.02979 0.06648 0.1054 2.87% Castro::computeInitialDt() 2 0.001727 0.03932 0.07808 2.13% Castro::initialize_advance() 10 0.06906 0.07307 0.0748 2.04% FabArray::setVal() 143 0.06142 0.07048 0.07269 1.98% Castro::computeTemp() 63 0.06449 0.06961 0.0717 1.95% Castro::do_new_sources() 10 0.05389 0.06348 0.06545 1.78% Castro::reset_internal_energy(MultiFab) 63 0.04744 0.05041 0.05185 1.41% Castro::reset_internal_energy(Fab) 1008 0.04711 0.0501 0.05155 1.40% FabArray::ParallelCopy_nowait() 41 0.02835 0.04525 0.05106 1.39% Castro::do_old_sources() 10 0.03225 0.0453 0.04933 1.34% StateDataPhysBCFunct::() 41 0.03449 0.04192 0.04623 1.26% StateData::FillBoundary(geom) 41 0.03439 0.04179 0.04608 1.25% Castro::normalize_species() 62 0.03983 0.04125 0.04177 1.14% Castro::construct_new_source() 50 0.02482 0.02954 0.03089 0.84% Gravity::interpolate_monopole_grav() 21 0.02629 0.02749 0.02789 0.76% Amr::writePlotFile() 2 0.02595 0.02717 0.0278 0.76% Castro::post_init() 1 0.0258 0.02639 0.02769 0.75% Castro::construct_new_gravity_source() 10 0.02006 0.02298 0.02373 0.65% VisMF::Write(FabArray) 2 0.0128 0.01366 0.01752 0.48% Castro::apply_source_to_state() 20 0.008659 0.01456 0.01663 0.45% MultiFab::Saxpy() 20 0.008608 0.0145 0.01656 0.45% Castro::post_timestep() 10 0.01587 0.01602 0.01616 0.44% FabArray::setDomainBndry() 41 0.004919 0.01035 0.01242 0.34% Castro::check_for_nan() 20 0.009441 0.01086 0.01203 0.33% MultiFab::contains_nan() 20 0.009419 0.01084 0.01201 0.33% Castro::Castro() 1 0.01063 0.01103 0.01192 0.32% Castro::construct_old_source() 50 0.004957 0.01014 0.01184 0.32% Castro::construct_old_gravity_source() 10 0.004919 0.01006 0.01175 0.32% Castro::initMFs() 1 0.006536 0.006964 0.008267 0.23% Castro::computeNewDt() 9 0.007114 0.007126 0.007138 0.19% Castro::enforce_min_density() 62 0.006018 0.006712 0.007129 0.19% AmrLevel::AmrLevel(dm) 1 0.005491 0.005722 0.006256 0.17% StateData::define() 4 0.005483 0.00571 0.006245 0.17% Castro::swap_state_time_levels() 10 0.003273 0.004276 0.004621 0.13% Castro::buildMetrics() 1 0.001659 0.001738 0.001958 0.05% Castro::post_regrid() 1 0.001609 0.001681 0.001752 0.05% Castro::finalize_do_advance() 10 0.0006527 0.001452 0.00169 0.05% Amr::InitAmr() 1 0.000262 0.0003629 0.0006396 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.591e-05 0.0003614 0.0004887 0.01% DistributionMapping::LeastUsedCPUs() 1 8.121e-06 0.0003554 0.0004817 0.01% Castro::enforce_consistent_e() 1 7.705e-05 8.981e-05 0.0001087 0.00% FabArrayBase::getCPC() 41 7.493e-05 8.181e-05 8.933e-05 0.00% Amr::writeSmallPlotFile() 1 3.152e-05 5.836e-05 7.13e-05 0.00% Castro::finalize_advance() 10 6.029e-05 6.302e-05 6.787e-05 0.00% Castro::enforce_speed_limit() 62 2.782e-05 3.116e-05 3.608e-05 0.00% FabArrayBase::CPC::define() 2 2.358e-05 2.665e-05 3.199e-05 0.00% Amr::initSubcycle() 1 7.968e-06 1.373e-05 2.738e-05 0.00% Gravity::swapTimeLevels() 10 6.944e-06 1.251e-05 1.591e-05 0.00% Castro::create_source_corrector() 10 8.885e-06 1.051e-05 1.206e-05 0.00% Castro::FluxRegCrseInit 10 6.172e-06 8.376e-06 1.096e-05 0.00% Gravity::set_mass_offset() 10 6.962e-06 9.446e-06 1.09e-05 0.00% Castro::retry_advance_ctu() 10 4.367e-06 5.939e-06 7.539e-06 0.00% Castro::FluxRegFineAdd() 10 1.898e-06 2.267e-06 2.523e-06 0.00% DistributionMapping::Distribute() 1 8.77e-07 1.166e-06 1.806e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.09-13-g17c94cc196d7) finalized