MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.09-16-g826cd378f8ba) initialized Starting run at 05:39:28 UTC on 2022-09-16. Successfully read inputs file ... Castro git describe: 22.09 AMReX git describe: 22.09-16-g826cd378f Microphysics git describe: 22.08-13-g1adf1bdb reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015445489 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.365317397 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.344272938 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.344262059 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342892917 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.352196549 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.350931556 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.337161073 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339682634 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.338410968 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.348219265 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.011016759 seconds Ending run at 05:39:31 UTC on 2022-09-16. Run time = 3.671183476 Run time without initialization = 3.482728688 Average number of zones advanced per microsecond: 0.753 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.668 ... 3.67 ... 3.671 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0976 2.3934 2.5047 68.23% Castro::do_advance_ctu() 10 0.03321 0.1479 0.449 12.23% Gravity::make_radial_gravity() 21 0.3542 0.365 0.3804 10.36% Castro::initData() 1 0.03964 0.08166 0.1223 3.33% Castro::estTimeStep() 21 0.02915 0.07073 0.1155 3.15% FabArray::ParallelCopy_finish() 41 0.04606 0.06401 0.1045 2.85% FabArray::setVal() 143 0.07025 0.07207 0.07369 2.01% Castro::reset_internal_energy(Fab) 1008 0.04804 0.05022 0.05224 1.42% FabArray::ParallelCopy_nowait() 41 0.03212 0.04538 0.05049 1.38% StateData::FillBoundary(geom) 41 0.03769 0.04287 0.04695 1.28% Castro::normalize_species() 62 0.0394 0.04184 0.04365 1.19% FillPatchIterator::Initialize 41 0.0247 0.03613 0.04038 1.10% Gravity::interpolate_monopole_grav() 21 0.02544 0.02733 0.02843 0.77% Castro::construct_new_gravity_source() 10 0.02182 0.02363 0.02463 0.67% Castro::expand_state() 10 0.01157 0.01886 0.02188 0.60% Castro::initialize_do_advance() 10 0.009955 0.01741 0.01999 0.54% Castro::computeTemp() 63 0.01786 0.01887 0.01981 0.54% MultiFab::Saxpy() 20 0.01143 0.01484 0.01641 0.45% VisMF::Write(FabArray) 2 0.01241 0.01317 0.01572 0.43% Amr::writePlotFile() 2 0.01096 0.0133 0.01384 0.38% Gravity::get_new_grav_vector() 11 0.009959 0.01191 0.01311 0.36% FabArray::setDomainBndry() 41 0.005839 0.01079 0.01286 0.35% MultiFab::contains_nan() 20 0.01076 0.01176 0.01275 0.35% Castro::construct_old_gravity_source() 10 0.006532 0.01059 0.01209 0.33% Castro::initialize_advance() 10 0.01081 0.01101 0.01161 0.32% Gravity::get_old_grav_vector() 10 0.006204 0.009475 0.01107 0.30% main() 1 0.004452 0.006737 0.007794 0.21% Castro::initMFs() 1 0.00666 0.007219 0.007784 0.21% Castro::construct_new_source() 50 0.005202 0.006623 0.007256 0.20% Castro::enforce_min_density() 62 0.006434 0.006768 0.007154 0.19% StateData::define() 4 0.005566 0.005964 0.006358 0.17% Castro::swap_state_time_levels() 10 0.00348 0.004667 0.004848 0.13% Amr::coarseTimeStep() 10 0.0008971 0.001966 0.003627 0.10% Castro::finalize_do_advance() 10 0.001658 0.0018 0.002039 0.06% Castro::buildMetrics() 1 0.00162 0.001731 0.001856 0.05% Amr::InitAmr() 1 0.0002789 0.0003113 0.0004618 0.01% Amr::timeStep() 10 0.0001713 0.000213 0.0003852 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0003043 0.0003158 0.0003364 0.01% DistributionMapping::LeastUsedCPUs() 1 7.473e-06 0.0001598 0.0002141 0.01% Castro::clean_state() 62 0.0001586 0.0001834 0.000202 0.01% StateDataPhysBCFunct::() 41 9.37e-05 0.0001213 0.0001417 0.00% FabArray::ParallelCopy() 41 7.087e-05 8.587e-05 9.753e-05 0.00% Castro::enforce_consistent_e() 1 7.831e-05 8.393e-05 9.731e-05 0.00% Castro::construct_old_source() 50 5.114e-05 8.193e-05 9.721e-05 0.00% Castro::do_old_sources() 10 4.338e-05 7.331e-05 8.825e-05 0.00% Castro::do_new_sources() 10 4.116e-05 7.414e-05 8.706e-05 0.00% FillPatchSingleLevel 41 5.813e-05 7.028e-05 7.907e-05 0.00% Amr::FinalizeInit() 1 3.215e-06 1.343e-05 7.676e-05 0.00% Amr::writeSmallPlotFile() 1 2.485e-05 5.415e-05 7.311e-05 0.00% Castro::subcycle_advance_ctu() 10 4.981e-05 6.254e-05 7.31e-05 0.00% Castro::Castro() 1 5.651e-05 6.159e-05 7.246e-05 0.00% Castro::finalize_advance() 10 4.775e-05 5.386e-05 7.24e-05 0.00% Castro::construct_old_gravity() 10 3.543e-05 5.329e-05 6.606e-05 0.00% FabArrayBase::getCPC() 41 4.963e-05 5.603e-05 6.163e-05 0.00% Castro::apply_source_to_state() 20 4.04e-05 5.221e-05 5.764e-05 0.00% Castro::advance() 10 3.271e-05 4.797e-05 5.501e-05 0.00% Castro::construct_new_gravity() 10 3.655e-05 4.551e-05 5.085e-05 0.00% Amr::defBaseLevel() 1 2.956e-05 3.769e-05 4.583e-05 0.00% Castro::enforce_speed_limit() 62 2.828e-05 3.268e-05 4.139e-05 0.00% FabArrayBase::CPC::define() 2 2.171e-05 2.707e-05 3.043e-05 0.00% Castro::check_for_nan() 20 2.105e-05 2.543e-05 2.987e-05 0.00% Castro::post_timestep() 10 1.211e-05 2.15e-05 2.624e-05 0.00% Gravity::swapTimeLevels() 10 7.282e-06 1.333e-05 2.24e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.188e-06 1.08e-05 1.477e-05 0.00% Castro::computeNewDt() 9 8.447e-06 1.081e-05 1.324e-05 0.00% Castro::create_source_corrector() 10 7.994e-06 1.074e-05 1.258e-05 0.00% Gravity::set_mass_offset() 10 6.962e-06 9.772e-06 1.172e-05 0.00% Castro::FluxRegCrseInit 10 7.25e-06 9.379e-06 1.075e-05 0.00% Amr::InitializeInit() 1 1.941e-06 4.159e-06 1.037e-05 0.00% Amr::initSubcycle() 1 8.508e-06 9.355e-06 1.019e-05 0.00% Castro::retry_advance_ctu() 10 3.867e-06 6.216e-06 8.044e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.75e-06 4.409e-06 5.455e-06 0.00% Castro::post_init() 1 2.846e-06 3.893e-06 5.319e-06 0.00% Castro::computeInitialDt() 2 3.371e-06 4.135e-06 4.943e-06 0.00% Castro::post_regrid() 1 1.532e-06 2.842e-06 4.223e-06 0.00% Amr::init() 1 1.656e-06 2.299e-06 3.665e-06 0.00% Castro::FluxRegFineAdd() 10 1.818e-06 2.578e-06 3.139e-06 0.00% DistributionMapping::Distribute() 1 1.001e-06 1.162e-06 1.771e-06 0.00% Amr::initialInit() 1 1.324e-06 1.635e-06 1.749e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.668 3.67 3.671 100.00% Amr::coarseTimeStep() 10 3.464 3.464 3.464 94.36% Amr::timeStep() 10 3.452 3.453 3.454 94.09% Castro::advance() 10 3.437 3.437 3.437 93.63% Castro::subcycle_advance_ctu() 10 3.36 3.363 3.366 91.68% Castro::do_advance_ctu() 10 3.36 3.363 3.366 91.68% Castro::construct_ctu_hydro_source() 10 2.098 2.393 2.505 68.23% Gravity::make_radial_gravity() 21 0.3542 0.365 0.3804 10.36% Castro::construct_old_gravity() 10 0.2154 0.2244 0.2374 6.47% Gravity::get_old_grav_vector() 10 0.2145 0.2236 0.2367 6.45% Gravity::get_new_grav_vector() 11 0.2277 0.2322 0.2346 6.39% Castro::construct_new_gravity() 10 0.2031 0.207 0.209 5.69% FillPatchIterator::Initialize 41 0.1908 0.1995 0.2065 5.63% Castro::initialize_do_advance() 10 0.1655 0.1804 0.1882 5.13% Amr::init() 1 0.1878 0.188 0.1881 5.12% FillPatchSingleLevel 41 0.1386 0.1526 0.1756 4.78% Amr::initialInit() 1 0.1723 0.1726 0.1729 4.71% Amr::InitializeInit() 1 0.05989 0.1029 0.1444 3.93% Amr::defBaseLevel() 1 0.05988 0.1028 0.1443 3.93% Castro::expand_state() 10 0.1259 0.1325 0.1385 3.77% FabArray::ParallelCopy() 41 0.09499 0.1096 0.1377 3.75% Castro::initData() 1 0.04363 0.08554 0.126 3.43% Castro::clean_state() 62 0.1114 0.1173 0.1221 3.33% Castro::estTimeStep() 21 0.02915 0.07073 0.1155 3.15% Amr::FinalizeInit() 1 0.02846 0.06977 0.113 3.08% FabArray::ParallelCopy_finish() 41 0.04606 0.06401 0.1045 2.85% Castro::computeInitialDt() 2 0.001583 0.04307 0.08607 2.34% Castro::initialize_advance() 10 0.07112 0.07403 0.07743 2.11% FabArray::setVal() 143 0.07025 0.07207 0.07369 2.01% Castro::computeTemp() 63 0.0662 0.0694 0.07237 1.97% Castro::do_new_sources() 10 0.06273 0.06494 0.06587 1.79% Castro::reset_internal_energy(MultiFab) 63 0.04834 0.05054 0.05255 1.43% Castro::reset_internal_energy(Fab) 1008 0.04804 0.05022 0.05224 1.42% Castro::do_old_sources() 10 0.03795 0.04695 0.05169 1.41% FabArray::ParallelCopy_nowait() 41 0.0322 0.04546 0.05057 1.38% StateDataPhysBCFunct::() 41 0.03779 0.04299 0.04709 1.28% StateData::FillBoundary(geom) 41 0.03769 0.04287 0.04695 1.28% Castro::normalize_species() 62 0.0394 0.04184 0.04365 1.19% Castro::construct_new_source() 50 0.02707 0.03025 0.03155 0.86% Gravity::interpolate_monopole_grav() 21 0.02544 0.02733 0.02843 0.77% Amr::writePlotFile() 2 0.02626 0.02647 0.02668 0.73% Castro::post_init() 1 0.02576 0.02601 0.02626 0.72% Castro::construct_new_gravity_source() 10 0.02182 0.02363 0.02463 0.67% Castro::post_timestep() 10 0.01457 0.01613 0.01729 0.47% Castro::apply_source_to_state() 20 0.01147 0.01489 0.01646 0.45% MultiFab::Saxpy() 20 0.01143 0.01484 0.01641 0.45% VisMF::Write(FabArray) 2 0.01241 0.01317 0.01572 0.43% FabArray::setDomainBndry() 41 0.005839 0.01079 0.01286 0.35% Castro::check_for_nan() 20 0.01078 0.01179 0.01278 0.35% MultiFab::contains_nan() 20 0.01076 0.01176 0.01275 0.35% Castro::construct_old_source() 50 0.006583 0.01067 0.01219 0.33% Castro::construct_old_gravity_source() 10 0.006532 0.01059 0.01209 0.33% Castro::Castro() 1 0.01033 0.01113 0.01191 0.32% Castro::computeNewDt() 9 0.007794 0.007804 0.007814 0.21% Castro::initMFs() 1 0.00666 0.007219 0.007784 0.21% Castro::enforce_min_density() 62 0.006434 0.006768 0.007154 0.19% AmrLevel::AmrLevel(dm) 1 0.005581 0.005975 0.006372 0.17% StateData::define() 4 0.005566 0.005964 0.006358 0.17% Castro::swap_state_time_levels() 10 0.00348 0.004667 0.004848 0.13% Castro::finalize_do_advance() 10 0.001658 0.0018 0.002039 0.06% Castro::buildMetrics() 1 0.001733 0.001862 0.002 0.05% Castro::post_regrid() 1 0.001521 0.00158 0.00166 0.05% Amr::InitAmr() 1 0.0002883 0.0003207 0.0004718 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.268e-05 0.0001654 0.0002201 0.01% DistributionMapping::LeastUsedCPUs() 1 7.473e-06 0.0001598 0.0002141 0.01% Castro::enforce_consistent_e() 1 7.831e-05 8.393e-05 9.731e-05 0.00% FabArrayBase::getCPC() 41 7.764e-05 8.31e-05 8.735e-05 0.00% Castro::finalize_advance() 10 5.752e-05 6.581e-05 8.415e-05 0.00% Amr::writeSmallPlotFile() 1 2.485e-05 5.415e-05 7.311e-05 0.00% Castro::enforce_speed_limit() 62 2.828e-05 3.268e-05 4.139e-05 0.00% FabArrayBase::CPC::define() 2 2.171e-05 2.707e-05 3.043e-05 0.00% Gravity::swapTimeLevels() 10 7.282e-06 1.333e-05 2.24e-05 0.00% Castro::create_source_corrector() 10 7.994e-06 1.074e-05 1.258e-05 0.00% Gravity::set_mass_offset() 10 6.962e-06 9.772e-06 1.172e-05 0.00% Castro::FluxRegCrseInit 10 7.25e-06 9.379e-06 1.075e-05 0.00% Amr::initSubcycle() 1 8.508e-06 9.355e-06 1.019e-05 0.00% Castro::retry_advance_ctu() 10 3.867e-06 6.216e-06 8.044e-06 0.00% Castro::FluxRegFineAdd() 10 1.818e-06 2.578e-06 3.139e-06 0.00% DistributionMapping::Distribute() 1 1.001e-06 1.162e-06 1.771e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.09-16-g826cd378f8ba) finalized