MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.09-16-g826cd378f8ba) initialized Starting run at 05:39:28 UTC on 2022-09-19. Successfully read inputs file ... Castro git describe: 22.09 AMReX git describe: 22.09-16-g826cd378f Microphysics git describe: 22.08-13-g1adf1bdb reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015697018 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.358680225 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.349496 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.344326003 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.343898631 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.354953017 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.353602667 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.339169596 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.340656082 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.339463375 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339248467 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.01033304 seconds Ending run at 05:39:32 UTC on 2022-09-19. Run time = 3.673178058 Run time without initialization = 3.48168362 Average number of zones advanced per microsecond: 0.753 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.67 ... 3.673 ... 3.673 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1425 2.4254 2.5267 68.79% Castro::do_advance_ctu() 10 0.03679 0.1393 0.4247 11.56% Gravity::make_radial_gravity() 21 0.3392 0.3545 0.3797 10.34% FabArray::ParallelCopy_finish() 41 0.0443 0.06425 0.1217 3.31% Castro::initData() 1 0.03978 0.07912 0.1206 3.28% Castro::estTimeStep() 21 0.02839 0.07222 0.1106 3.01% FabArray::setVal() 143 0.0624 0.06995 0.07227 1.97% Castro::reset_internal_energy(Fab) 1008 0.04818 0.05015 0.05151 1.40% FabArray::ParallelCopy_nowait() 41 0.02814 0.04494 0.05056 1.38% StateData::FillBoundary(geom) 41 0.03658 0.04169 0.04599 1.25% Castro::normalize_species() 62 0.04047 0.04159 0.04218 1.15% FillPatchIterator::Initialize 41 0.0246 0.0363 0.0404 1.10% Gravity::interpolate_monopole_grav() 21 0.02668 0.02737 0.02776 0.76% Castro::construct_new_gravity_source() 10 0.02023 0.02292 0.02437 0.66% Castro::expand_state() 10 0.009915 0.01831 0.02193 0.60% Castro::computeTemp() 63 0.01791 0.01904 0.02004 0.55% Castro::initialize_do_advance() 10 0.01018 0.01756 0.01986 0.54% MultiFab::Saxpy() 20 0.008676 0.01431 0.01627 0.44% VisMF::Write(FabArray) 2 0.01264 0.01351 0.01614 0.44% Amr::writePlotFile() 2 0.0101 0.01302 0.01412 0.38% MultiFab::contains_nan() 20 0.009921 0.01171 0.0133 0.36% Gravity::get_new_grav_vector() 11 0.007441 0.0114 0.01305 0.36% FabArray::setDomainBndry() 41 0.004902 0.01065 0.01263 0.34% Castro::construct_old_gravity_source() 10 0.004962 0.01009 0.01175 0.32% Castro::initialize_advance() 10 0.006739 0.009926 0.01098 0.30% Gravity::get_old_grav_vector() 10 0.005822 0.009307 0.01084 0.30% Castro::initMFs() 1 0.006696 0.007016 0.008786 0.24% Castro::construct_new_source() 50 0.004836 0.006552 0.007214 0.20% Castro::enforce_min_density() 62 0.00602 0.006704 0.007156 0.19% main() 1 0.004237 0.006657 0.007145 0.19% StateData::define() 4 0.005625 0.005776 0.006406 0.17% Castro::swap_state_time_levels() 10 0.003307 0.004396 0.004659 0.13% Amr::coarseTimeStep() 10 0.0008204 0.001593 0.002969 0.08% Castro::buildMetrics() 1 0.001574 0.00162 0.001856 0.05% Castro::finalize_do_advance() 10 0.0006556 0.001418 0.001618 0.04% Amr::InitAmr() 1 0.0002606 0.0003012 0.00048 0.01% Amr::timeStep() 10 0.0001712 0.0002297 0.0004641 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000287 0.000299 0.0003082 0.01% DistributionMapping::LeastUsedCPUs() 1 8.569e-06 0.0001838 0.000226 0.01% Castro::clean_state() 62 0.0001556 0.0001718 0.0001865 0.01% StateDataPhysBCFunct::() 41 9.083e-05 0.0001144 0.0001316 0.00% Castro::Castro() 1 5.263e-05 7.494e-05 0.0001014 0.00% Castro::construct_old_source() 50 3.231e-05 7.357e-05 9.534e-05 0.00% Castro::enforce_consistent_e() 1 7.863e-05 8.46e-05 9.154e-05 0.00% FabArray::ParallelCopy() 41 6.091e-05 8.098e-05 9.091e-05 0.00% Castro::do_new_sources() 10 3.899e-05 6.875e-05 8.83e-05 0.00% Castro::subcycle_advance_ctu() 10 4.276e-05 5.997e-05 8.458e-05 0.00% Castro::do_old_sources() 10 4.12e-05 7.139e-05 8.33e-05 0.00% FabArrayBase::getCPC() 41 5.239e-05 5.811e-05 7.766e-05 0.00% FillPatchSingleLevel 41 5.269e-05 6.416e-05 7.18e-05 0.00% Amr::FinalizeInit() 1 3.965e-06 1.329e-05 7.086e-05 0.00% Amr::writeSmallPlotFile() 1 3.146e-05 5.642e-05 6.811e-05 0.00% Castro::construct_old_gravity() 10 3.727e-05 5.152e-05 6.172e-05 0.00% Castro::apply_source_to_state() 20 3.975e-05 5.104e-05 5.981e-05 0.00% Castro::finalize_advance() 10 4.617e-05 5.234e-05 5.856e-05 0.00% Castro::construct_new_gravity() 10 4.223e-05 4.851e-05 5.617e-05 0.00% Amr::defBaseLevel() 1 3.789e-05 4.759e-05 5.313e-05 0.00% Castro::advance() 10 2.926e-05 4.514e-05 5.292e-05 0.00% Castro::enforce_speed_limit() 62 2.594e-05 3.259e-05 3.873e-05 0.00% FabArrayBase::CPC::define() 2 2.223e-05 2.582e-05 3.078e-05 0.00% Castro::check_for_nan() 20 1.954e-05 2.404e-05 2.679e-05 0.00% Castro::post_timestep() 10 1.396e-05 2.033e-05 2.601e-05 0.00% Gravity::set_mass_offset() 10 6.766e-06 1.102e-05 1.629e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.429e-06 1.154e-05 1.595e-05 0.00% Gravity::swapTimeLevels() 10 6.697e-06 1.216e-05 1.501e-05 0.00% Castro::create_source_corrector() 10 7.131e-06 1.057e-05 1.262e-05 0.00% Castro::computeNewDt() 9 8.069e-06 1.01e-05 1.17e-05 0.00% Castro::post_init() 1 3.004e-06 5.407e-06 1.084e-05 0.00% Castro::FluxRegCrseInit 10 6.807e-06 8.624e-06 1.029e-05 0.00% Amr::initSubcycle() 1 8.44e-06 9.209e-06 1.007e-05 0.00% Castro::retry_advance_ctu() 10 4.205e-06 5.895e-06 7.388e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.165e-06 5.267e-06 6.589e-06 0.00% Amr::InitializeInit() 1 2.072e-06 3.6e-06 6.01e-06 0.00% Castro::computeInitialDt() 2 3.015e-06 3.655e-06 4.781e-06 0.00% Castro::post_regrid() 1 1.904e-06 2.656e-06 3.876e-06 0.00% Castro::FluxRegFineAdd() 10 1.899e-06 2.215e-06 2.953e-06 0.00% Amr::init() 1 1.905e-06 2.195e-06 2.609e-06 0.00% Amr::initialInit() 1 1.272e-06 1.548e-06 1.895e-06 0.00% DistributionMapping::Distribute() 1 1.021e-06 1.221e-06 1.36e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.67 3.673 3.673 100.00% Amr::coarseTimeStep() 10 3.464 3.464 3.464 94.31% Amr::timeStep() 10 3.453 3.455 3.455 94.07% Castro::advance() 10 3.438 3.439 3.439 93.62% Castro::subcycle_advance_ctu() 10 3.365 3.367 3.373 91.81% Castro::do_advance_ctu() 10 3.365 3.367 3.372 91.81% Castro::construct_ctu_hydro_source() 10 2.143 2.425 2.527 68.79% Gravity::make_radial_gravity() 21 0.3392 0.3545 0.3797 10.34% Gravity::get_new_grav_vector() 11 0.2282 0.2341 0.2358 6.42% Castro::construct_old_gravity() 10 0.1969 0.2106 0.2296 6.25% Gravity::get_old_grav_vector() 10 0.1961 0.2098 0.2291 6.24% FillPatchIterator::Initialize 41 0.1876 0.1982 0.2162 5.89% Castro::construct_new_gravity() 10 0.2006 0.2054 0.2071 5.64% Amr::init() 1 0.1908 0.191 0.1911 5.20% Castro::initialize_do_advance() 10 0.1688 0.1807 0.1898 5.17% FillPatchSingleLevel 41 0.1353 0.1512 0.1867 5.08% Amr::initialInit() 1 0.1747 0.1749 0.1752 4.77% FabArray::ParallelCopy() 41 0.09237 0.1094 0.15 4.08% Amr::InitializeInit() 1 0.06086 0.1005 0.1431 3.90% Amr::defBaseLevel() 1 0.06086 0.1005 0.1431 3.90% Castro::expand_state() 10 0.1253 0.1326 0.1399 3.81% Castro::initData() 1 0.04383 0.08309 0.1242 3.38% FabArray::ParallelCopy_finish() 41 0.0443 0.06425 0.1217 3.31% Castro::clean_state() 62 0.1123 0.1171 0.1191 3.24% Amr::FinalizeInit() 1 0.03169 0.07444 0.114 3.10% Castro::estTimeStep() 21 0.02839 0.07222 0.1106 3.01% Castro::computeInitialDt() 2 0.001617 0.04421 0.08387 2.28% Castro::initialize_advance() 10 0.06521 0.0715 0.07374 2.01% FabArray::setVal() 143 0.0624 0.06995 0.07227 1.97% Castro::computeTemp() 63 0.06654 0.06949 0.07178 1.95% Castro::do_new_sources() 10 0.05443 0.06326 0.06609 1.80% Castro::reset_internal_energy(MultiFab) 63 0.04848 0.05045 0.05181 1.41% Castro::reset_internal_energy(Fab) 1008 0.04818 0.05015 0.05151 1.40% FabArray::ParallelCopy_nowait() 41 0.02824 0.04502 0.05064 1.38% Castro::do_old_sources() 10 0.03322 0.04544 0.04917 1.34% StateDataPhysBCFunct::() 41 0.03668 0.0418 0.04612 1.26% StateData::FillBoundary(geom) 41 0.03658 0.04169 0.04599 1.25% Castro::normalize_species() 62 0.04047 0.04159 0.04218 1.15% Castro::construct_new_source() 50 0.02506 0.02947 0.03102 0.84% Castro::post_init() 1 0.02921 0.02951 0.02981 0.81% Gravity::interpolate_monopole_grav() 21 0.02668 0.02737 0.02776 0.76% Amr::writePlotFile() 2 0.02624 0.02652 0.02681 0.73% Castro::construct_new_gravity_source() 10 0.02023 0.02292 0.02437 0.66% Castro::post_timestep() 10 0.01525 0.01586 0.01649 0.45% Castro::apply_source_to_state() 20 0.008716 0.01436 0.01632 0.44% MultiFab::Saxpy() 20 0.008676 0.01431 0.01627 0.44% VisMF::Write(FabArray) 2 0.01264 0.01351 0.01614 0.44% Castro::check_for_nan() 20 0.009941 0.01173 0.01333 0.36% MultiFab::contains_nan() 20 0.009921 0.01171 0.0133 0.36% FabArray::setDomainBndry() 41 0.004902 0.01065 0.01263 0.34% Castro::Castro() 1 0.0111 0.01135 0.01226 0.33% Castro::construct_old_source() 50 0.004994 0.01017 0.01183 0.32% Castro::construct_old_gravity_source() 10 0.004962 0.01009 0.01175 0.32% Castro::initMFs() 1 0.006696 0.007016 0.008786 0.24% Castro::enforce_min_density() 62 0.00602 0.006704 0.007156 0.19% Castro::computeNewDt() 9 0.007035 0.007046 0.007052 0.19% AmrLevel::AmrLevel(dm) 1 0.005639 0.005788 0.006414 0.17% StateData::define() 4 0.005625 0.005776 0.006406 0.17% Castro::swap_state_time_levels() 10 0.003307 0.004396 0.004659 0.13% Castro::buildMetrics() 1 0.0017 0.001752 0.002009 0.05% Castro::post_regrid() 1 0.001569 0.001625 0.001694 0.05% Castro::finalize_do_advance() 10 0.0006556 0.001418 0.001618 0.04% Amr::InitAmr() 1 0.0002694 0.0003104 0.0004901 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.385e-05 0.0001903 0.0002334 0.01% DistributionMapping::LeastUsedCPUs() 1 8.569e-06 0.0001838 0.000226 0.01% FabArrayBase::getCPC() 41 7.595e-05 8.393e-05 0.0001037 0.00% Castro::enforce_consistent_e() 1 7.863e-05 8.46e-05 9.154e-05 0.00% Castro::finalize_advance() 10 5.488e-05 6.318e-05 7.078e-05 0.00% Amr::writeSmallPlotFile() 1 3.146e-05 5.642e-05 6.811e-05 0.00% Castro::enforce_speed_limit() 62 2.594e-05 3.259e-05 3.873e-05 0.00% FabArrayBase::CPC::define() 2 2.223e-05 2.582e-05 3.078e-05 0.00% Gravity::set_mass_offset() 10 6.766e-06 1.102e-05 1.629e-05 0.00% Gravity::swapTimeLevels() 10 6.697e-06 1.216e-05 1.501e-05 0.00% Castro::create_source_corrector() 10 7.131e-06 1.057e-05 1.262e-05 0.00% Castro::FluxRegCrseInit 10 6.807e-06 8.624e-06 1.029e-05 0.00% Amr::initSubcycle() 1 8.44e-06 9.209e-06 1.007e-05 0.00% Castro::retry_advance_ctu() 10 4.205e-06 5.895e-06 7.388e-06 0.00% Castro::FluxRegFineAdd() 10 1.899e-06 2.215e-06 2.953e-06 0.00% DistributionMapping::Distribute() 1 1.021e-06 1.221e-06 1.36e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.09-16-g826cd378f8ba) finalized