MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.09-16-g826cd378f8ba) initialized Starting run at 05:39:14 UTC on 2022-09-20. Successfully read inputs file ... Castro git describe: 22.09 AMReX git describe: 22.09-16-g826cd378f Microphysics git describe: 22.08-13-g1adf1bdb reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01536757 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.368486764 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.349233772 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.346902696 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.346378321 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.355962299 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.35665453 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.339779622 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.340319687 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.338431068 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339274731 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.01037677 seconds Ending run at 05:39:18 UTC on 2022-09-20. Run time = 3.681681117 Run time without initialization = 3.499516645 Average number of zones advanced per microsecond: 0.749 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.681 ... 3.682 ... 3.682 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1349 2.4297 2.5320 68.77% Castro::do_advance_ctu() 10 0.03045 0.1345 0.434 11.79% Gravity::make_radial_gravity() 21 0.3431 0.3551 0.3711 10.08% Castro::initData() 1 0.03987 0.07979 0.1165 3.16% FabArray::ParallelCopy_finish() 41 0.04507 0.06323 0.1066 2.89% Castro::estTimeStep() 21 0.02845 0.06583 0.1055 2.87% FabArray::setVal() 143 0.07186 0.07349 0.07487 2.03% Castro::reset_internal_energy(Fab) 1008 0.04984 0.05082 0.05235 1.42% FabArray::ParallelCopy_nowait() 41 0.03198 0.04606 0.05127 1.39% StateData::FillBoundary(geom) 41 0.03515 0.04252 0.0469 1.27% Castro::normalize_species() 62 0.04123 0.04185 0.04271 1.16% FillPatchIterator::Initialize 41 0.02501 0.0366 0.04062 1.10% Gravity::interpolate_monopole_grav() 21 0.02655 0.02753 0.02792 0.76% Castro::construct_new_gravity_source() 10 0.02332 0.02406 0.02528 0.69% Castro::expand_state() 10 0.01349 0.02054 0.02363 0.64% Castro::computeTemp() 63 0.01859 0.01932 0.01995 0.54% Castro::initialize_do_advance() 10 0.01626 0.01834 0.01902 0.52% VisMF::Write(FabArray) 2 0.01248 0.01331 0.01744 0.47% MultiFab::Saxpy() 20 0.01148 0.01506 0.01672 0.45% Amr::writePlotFile() 2 0.008545 0.01289 0.01383 0.38% Gravity::get_new_grav_vector() 11 0.01048 0.01223 0.01327 0.36% MultiFab::contains_nan() 20 0.01092 0.01176 0.01282 0.35% FabArray::setDomainBndry() 41 0.005387 0.01082 0.01273 0.35% Castro::construct_old_gravity_source() 10 0.00712 0.01081 0.01245 0.34% Castro::initialize_advance() 10 0.01061 0.01096 0.01166 0.32% Gravity::get_old_grav_vector() 10 0.006459 0.009754 0.01111 0.30% Castro::initMFs() 1 0.006576 0.006852 0.008615 0.23% Castro::construct_new_source() 50 0.00517 0.006693 0.007283 0.20% Castro::enforce_min_density() 62 0.00649 0.006837 0.007043 0.19% main() 1 0.006539 0.006741 0.006933 0.19% StateData::define() 4 0.005467 0.005579 0.006241 0.17% Castro::swap_state_time_levels() 10 0.003384 0.004542 0.004723 0.13% Castro::finalize_do_advance() 10 0.001621 0.00183 0.002128 0.06% Amr::coarseTimeStep() 10 0.001086 0.001526 0.001915 0.05% Castro::buildMetrics() 1 0.001538 0.001586 0.00181 0.05% Amr::timeStep() 10 0.0001619 0.0002208 0.0004469 0.01% Amr::InitAmr() 1 0.0002691 0.0002981 0.0004183 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002886 0.0003018 0.0003151 0.01% Castro::clean_state() 62 0.0001576 0.0001812 0.0002236 0.01% DistributionMapping::LeastUsedCPUs() 1 6.735e-06 0.0001282 0.0001537 0.00% StateDataPhysBCFunct::() 41 0.000108 0.0001185 0.00014 0.00% Castro::Castro() 1 5.726e-05 7.628e-05 0.0001121 0.00% Castro::construct_old_source() 50 4.401e-05 8.112e-05 0.0001026 0.00% Castro::enforce_consistent_e() 1 7.789e-05 8.803e-05 9.797e-05 0.00% FabArray::ParallelCopy() 41 7.911e-05 8.881e-05 9.738e-05 0.00% Castro::do_new_sources() 10 4.765e-05 7.609e-05 9.589e-05 0.00% Castro::do_old_sources() 10 4.375e-05 7.19e-05 8.883e-05 0.00% FillPatchSingleLevel 41 6.084e-05 6.859e-05 8.55e-05 0.00% Amr::FinalizeInit() 1 3.895e-06 1.449e-05 8.34e-05 0.00% Castro::subcycle_advance_ctu() 10 4.608e-05 6.329e-05 7.995e-05 0.00% Amr::writeSmallPlotFile() 1 4.21e-05 6.599e-05 7.546e-05 0.00% Castro::construct_old_gravity() 10 4.773e-05 5.962e-05 6.815e-05 0.00% FabArrayBase::getCPC() 41 5.088e-05 5.557e-05 6.716e-05 0.00% Castro::apply_source_to_state() 20 4.366e-05 5.418e-05 6.189e-05 0.00% Castro::advance() 10 3.586e-05 4.628e-05 6.085e-05 0.00% Castro::finalize_advance() 10 5.009e-05 5.317e-05 5.834e-05 0.00% Amr::defBaseLevel() 1 2.903e-05 4.122e-05 5.613e-05 0.00% Castro::construct_new_gravity() 10 4e-05 4.745e-05 5.087e-05 0.00% Castro::enforce_speed_limit() 62 3.018e-05 3.384e-05 3.86e-05 0.00% FabArrayBase::CPC::define() 2 2.304e-05 2.791e-05 3.378e-05 0.00% Castro::check_for_nan() 20 2.141e-05 2.687e-05 3.352e-05 0.00% Castro::post_timestep() 10 1.5e-05 2.322e-05 2.806e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.232e-06 1.086e-05 1.837e-05 0.00% Gravity::swapTimeLevels() 10 9.497e-06 1.256e-05 1.485e-05 0.00% Castro::create_source_corrector() 10 8.547e-06 1.099e-05 1.417e-05 0.00% Gravity::set_mass_offset() 10 6.594e-06 1.006e-05 1.236e-05 0.00% Castro::computeNewDt() 9 8.872e-06 9.922e-06 1.132e-05 0.00% Castro::FluxRegCrseInit 10 6.733e-06 9.418e-06 1.113e-05 0.00% Amr::initSubcycle() 1 8.376e-06 8.846e-06 1.009e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.49e-06 5.572e-06 8.229e-06 0.00% Castro::retry_advance_ctu() 10 4.774e-06 5.826e-06 7.418e-06 0.00% Amr::InitializeInit() 1 1.965e-06 2.96e-06 5.825e-06 0.00% Castro::post_init() 1 3.324e-06 3.818e-06 5.295e-06 0.00% Castro::computeInitialDt() 2 3.047e-06 3.964e-06 4.959e-06 0.00% Castro::post_regrid() 1 1.761e-06 2.533e-06 3.751e-06 0.00% Castro::FluxRegFineAdd() 10 1.934e-06 2.377e-06 3.205e-06 0.00% Amr::init() 1 1.838e-06 2.157e-06 2.877e-06 0.00% Amr::initialInit() 1 1.548e-06 1.692e-06 2.012e-06 0.00% DistributionMapping::Distribute() 1 9.1e-07 1.036e-06 1.279e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.681 3.682 3.682 100.00% Amr::coarseTimeStep() 10 3.482 3.482 3.482 94.58% Amr::timeStep() 10 3.472 3.473 3.473 94.33% Castro::advance() 10 3.456 3.456 3.457 93.88% Castro::subcycle_advance_ctu() 10 3.38 3.382 3.386 91.96% Castro::do_advance_ctu() 10 3.38 3.381 3.386 91.96% Castro::construct_ctu_hydro_source() 10 2.135 2.43 2.532 68.77% Gravity::make_radial_gravity() 21 0.3431 0.3551 0.3711 10.08% Gravity::get_new_grav_vector() 11 0.2266 0.2313 0.2338 6.35% Castro::construct_old_gravity() 10 0.205 0.216 0.2297 6.24% Gravity::get_old_grav_vector() 10 0.204 0.2151 0.229 6.22% Castro::construct_new_gravity() 10 0.2019 0.2062 0.2085 5.66% FillPatchIterator::Initialize 41 0.1958 0.1996 0.2045 5.55% Castro::initialize_do_advance() 10 0.1735 0.1849 0.1929 5.24% Amr::init() 1 0.1816 0.1817 0.1818 4.94% FillPatchSingleLevel 41 0.1427 0.1522 0.1741 4.73% Amr::initialInit() 1 0.1659 0.166 0.1661 4.51% Castro::expand_state() 10 0.1271 0.1357 0.1426 3.87% FabArray::ParallelCopy() 41 0.0965 0.1095 0.1387 3.77% Amr::InitializeInit() 1 0.06076 0.1008 0.1376 3.74% Amr::defBaseLevel() 1 0.06076 0.1008 0.1376 3.74% Castro::initData() 1 0.04396 0.08384 0.1207 3.28% Castro::clean_state() 62 0.1167 0.1184 0.1196 3.25% FabArray::ParallelCopy_finish() 41 0.04507 0.06323 0.1066 2.89% Castro::estTimeStep() 21 0.02845 0.06583 0.1055 2.87% Amr::FinalizeInit() 1 0.02826 0.06514 0.1051 2.86% Castro::computeInitialDt() 2 0.00171 0.03845 0.07856 2.13% Castro::initialize_advance() 10 0.07046 0.07458 0.07611 2.07% FabArray::setVal() 143 0.07186 0.07349 0.07487 2.03% Castro::computeTemp() 63 0.06874 0.07044 0.07261 1.97% Castro::do_new_sources() 10 0.06531 0.06589 0.06755 1.83% Castro::reset_internal_energy(MultiFab) 63 0.05016 0.05112 0.05266 1.43% Castro::reset_internal_energy(Fab) 1008 0.04984 0.05082 0.05235 1.42% FabArray::ParallelCopy_nowait() 41 0.03206 0.04615 0.05135 1.39% Castro::do_old_sources() 10 0.03848 0.04718 0.05054 1.37% StateDataPhysBCFunct::() 41 0.03526 0.04264 0.04702 1.28% StateData::FillBoundary(geom) 41 0.03515 0.04252 0.0469 1.27% Castro::normalize_species() 62 0.04123 0.04185 0.04271 1.16% Castro::construct_new_source() 50 0.03018 0.03076 0.03157 0.86% Gravity::interpolate_monopole_grav() 21 0.02655 0.02753 0.02792 0.76% Amr::writePlotFile() 2 0.02598 0.0262 0.02635 0.72% Castro::post_init() 1 0.02585 0.02599 0.02617 0.71% Castro::construct_new_gravity_source() 10 0.02332 0.02406 0.02528 0.69% VisMF::Write(FabArray) 2 0.01248 0.01331 0.01744 0.47% Castro::apply_source_to_state() 20 0.01153 0.01512 0.01678 0.46% MultiFab::Saxpy() 20 0.01148 0.01506 0.01672 0.45% Castro::post_timestep() 10 0.01591 0.01607 0.01628 0.44% Castro::check_for_nan() 20 0.01094 0.01178 0.01286 0.35% MultiFab::contains_nan() 20 0.01092 0.01176 0.01282 0.35% FabArray::setDomainBndry() 41 0.005387 0.01082 0.01273 0.35% Castro::construct_old_source() 50 0.007171 0.01089 0.01254 0.34% Castro::construct_old_gravity_source() 10 0.00712 0.01081 0.01245 0.34% Castro::Castro() 1 0.01105 0.01124 0.01211 0.33% Castro::initMFs() 1 0.006576 0.006852 0.008615 0.23% Castro::computeNewDt() 9 0.007203 0.007221 0.007232 0.20% Castro::enforce_min_density() 62 0.00649 0.006837 0.007043 0.19% AmrLevel::AmrLevel(dm) 1 0.005475 0.00559 0.006259 0.17% StateData::define() 4 0.005467 0.005579 0.006241 0.17% Castro::swap_state_time_levels() 10 0.003384 0.004542 0.004723 0.13% Castro::finalize_do_advance() 10 0.001621 0.00183 0.002128 0.06% Castro::buildMetrics() 1 0.001657 0.001715 0.00196 0.05% Castro::post_regrid() 1 0.001573 0.00161 0.00166 0.05% Amr::InitAmr() 1 0.0002782 0.0003069 0.0004271 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.133e-05 0.0001348 0.0001603 0.00% DistributionMapping::LeastUsedCPUs() 1 6.735e-06 0.0001282 0.0001537 0.00% FabArrayBase::getCPC() 41 7.483e-05 8.348e-05 9.906e-05 0.00% Castro::enforce_consistent_e() 1 7.789e-05 8.803e-05 9.797e-05 0.00% Amr::writeSmallPlotFile() 1 4.21e-05 6.599e-05 7.546e-05 0.00% Castro::finalize_advance() 10 6.071e-05 6.497e-05 7.089e-05 0.00% Castro::enforce_speed_limit() 62 3.018e-05 3.384e-05 3.86e-05 0.00% FabArrayBase::CPC::define() 2 2.304e-05 2.791e-05 3.378e-05 0.00% Gravity::swapTimeLevels() 10 9.497e-06 1.256e-05 1.485e-05 0.00% Castro::create_source_corrector() 10 8.547e-06 1.099e-05 1.417e-05 0.00% Gravity::set_mass_offset() 10 6.594e-06 1.006e-05 1.236e-05 0.00% Castro::FluxRegCrseInit 10 6.733e-06 9.418e-06 1.113e-05 0.00% Amr::initSubcycle() 1 8.376e-06 8.846e-06 1.009e-05 0.00% Castro::retry_advance_ctu() 10 4.774e-06 5.826e-06 7.418e-06 0.00% Castro::FluxRegFineAdd() 10 1.934e-06 2.377e-06 3.205e-06 0.00% DistributionMapping::Distribute() 1 9.1e-07 1.036e-06 1.279e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.09-16-g826cd378f8ba) finalized