MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.09-18-g3e5cc7780280) initialized Starting run at 05:39:18 UTC on 2022-09-22. Successfully read inputs file ... Castro git describe: 22.09 AMReX git describe: 22.09-18-g3e5cc7780 Microphysics git describe: 22.08-14-ge34b20a4 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.018105058 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.369818883 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.342738439 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342004364 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.341772147 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.349705876 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.347105727 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.337237635 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.337603016 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.338185292 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.337807622 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010355864 seconds Ending run at 05:39:22 UTC on 2022-09-22. Run time = 3.719412267 Run time without initialization = 3.462177532 Average number of zones advanced per microsecond: 0.757 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.717 ... 3.719 ... 3.719 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1471 2.4070 2.5039 67.32% Castro::do_advance_ctu() 10 0.03841 0.1371 0.3998 10.75% Gravity::make_radial_gravity() 21 0.3565 0.37 0.3948 10.62% Castro::initData() 1 0.04103 0.09146 0.1664 4.47% Castro::estTimeStep() 21 0.02764 0.1106 0.1614 4.34% FabArray::ParallelCopy_finish() 41 0.03894 0.06335 0.1255 3.37% FabArray::setVal() 143 0.05621 0.06704 0.07127 1.92% Castro::reset_internal_energy(Fab) 1008 0.04684 0.05043 0.05351 1.44% FabArray::ParallelCopy_nowait() 41 0.02799 0.04442 0.05 1.34% StateData::FillBoundary(geom) 41 0.03708 0.04194 0.04613 1.24% Castro::normalize_species() 62 0.03961 0.04176 0.04381 1.18% FillPatchIterator::Initialize 41 0.02432 0.03643 0.04257 1.14% Gravity::interpolate_monopole_grav() 21 0.02665 0.02772 0.02861 0.77% Castro::construct_new_gravity_source() 10 0.01993 0.02268 0.02364 0.64% Castro::expand_state() 10 0.009682 0.01829 0.02255 0.61% Castro::initialize_do_advance() 10 0.01021 0.01789 0.02081 0.56% Castro::computeTemp() 63 0.01795 0.01928 0.02026 0.54% VisMF::Write(FabArray) 2 0.01268 0.01424 0.01838 0.49% Amr::writePlotFile() 2 0.01028 0.01468 0.01715 0.46% MultiFab::Saxpy() 20 0.00866 0.01428 0.01645 0.44% Gravity::get_new_grav_vector() 11 0.007424 0.0114 0.01271 0.34% MultiFab::contains_nan() 20 0.009647 0.01126 0.0127 0.34% FabArray::setDomainBndry() 41 0.004946 0.01028 0.01219 0.33% Castro::construct_old_gravity_source() 10 0.005023 0.01009 0.01202 0.32% Castro::initialize_advance() 10 0.00662 0.009997 0.01132 0.30% Gravity::get_old_grav_vector() 10 0.005625 0.00917 0.01077 0.29% Castro::initMFs() 1 0.006677 0.007774 0.01027 0.28% StateData::define() 4 0.005539 0.006295 0.008123 0.22% Castro::enforce_min_density() 62 0.005922 0.006682 0.007391 0.20% main() 1 0.004252 0.006275 0.007153 0.19% Castro::construct_new_source() 50 0.004839 0.006505 0.007146 0.19% Castro::swap_state_time_levels() 10 0.003281 0.004847 0.006534 0.18% Amr::coarseTimeStep() 10 0.0008524 0.00164 0.003291 0.09% Castro::buildMetrics() 1 0.001592 0.001809 0.002347 0.06% Castro::finalize_do_advance() 10 0.0007887 0.001407 0.001589 0.04% Amr::InitAmr() 1 0.000285 0.0003559 0.0005029 0.01% Amr::timeStep() 10 0.0001689 0.0002274 0.000462 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000276 0.0003095 0.0003446 0.01% DistributionMapping::LeastUsedCPUs() 1 6.483e-06 0.00019 0.0002786 0.01% Castro::clean_state() 62 0.0001415 0.0001607 0.0001772 0.00% Castro::enforce_consistent_e() 1 7.86e-05 0.0001048 0.0001727 0.00% StateDataPhysBCFunct::() 41 9.978e-05 0.0001203 0.000141 0.00% Castro::do_old_sources() 10 3.22e-05 6.95e-05 9.24e-05 0.00% FabArray::ParallelCopy() 41 5.425e-05 8.161e-05 9.087e-05 0.00% Castro::construct_old_source() 50 3.786e-05 7.134e-05 8.831e-05 0.00% Castro::do_new_sources() 10 4.316e-05 6.957e-05 8.215e-05 0.00% Castro::Castro() 1 5.648e-05 6.572e-05 7.592e-05 0.00% FillPatchSingleLevel 41 5.74e-05 6.714e-05 7.562e-05 0.00% Amr::FinalizeInit() 1 3.718e-06 1.355e-05 7.466e-05 0.00% Castro::subcycle_advance_ctu() 10 4.246e-05 5.556e-05 7.277e-05 0.00% Amr::writeSmallPlotFile() 1 3.144e-05 6.066e-05 7.03e-05 0.00% Castro::construct_old_gravity() 10 4.018e-05 5.236e-05 6.556e-05 0.00% FabArrayBase::getCPC() 41 4.936e-05 5.752e-05 6.151e-05 0.00% Castro::apply_source_to_state() 20 3.762e-05 5.176e-05 6.139e-05 0.00% Amr::defBaseLevel() 1 3.661e-05 4.534e-05 6.09e-05 0.00% Castro::finalize_advance() 10 5.123e-05 5.375e-05 6.048e-05 0.00% Castro::construct_new_gravity() 10 3.492e-05 4.683e-05 5.435e-05 0.00% Castro::advance() 10 3.293e-05 4.485e-05 5.186e-05 0.00% Castro::enforce_speed_limit() 62 2.711e-05 2.974e-05 3.433e-05 0.00% FabArrayBase::CPC::define() 2 2.017e-05 2.597e-05 2.942e-05 0.00% Castro::check_for_nan() 20 2.173e-05 2.554e-05 2.938e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.86e-06 1.788e-05 2.86e-05 0.00% Castro::post_timestep() 10 1.307e-05 1.867e-05 2.268e-05 0.00% Gravity::swapTimeLevels() 10 7.106e-06 1.456e-05 2.164e-05 0.00% Castro::post_init() 1 3.778e-06 7.845e-06 1.521e-05 0.00% Amr::initSubcycle() 1 8.136e-06 1.025e-05 1.495e-05 0.00% Castro::create_source_corrector() 10 6.488e-06 9.979e-06 1.24e-05 0.00% Gravity::set_mass_offset() 10 6.75e-06 9.734e-06 1.152e-05 0.00% Castro::FluxRegCrseInit 10 5.89e-06 9.082e-06 1.132e-05 0.00% Castro::computeNewDt() 9 7.339e-06 9.397e-06 1.088e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.8e-06 5.322e-06 8.968e-06 0.00% Castro::retry_advance_ctu() 10 4.844e-06 6.333e-06 7.564e-06 0.00% Amr::InitializeInit() 1 2.131e-06 3.297e-06 5.569e-06 0.00% Castro::computeInitialDt() 2 3.787e-06 4.25e-06 5.035e-06 0.00% Castro::post_regrid() 1 2.629e-06 3.613e-06 4.29e-06 0.00% Amr::init() 1 1.639e-06 2.418e-06 2.977e-06 0.00% Castro::FluxRegFineAdd() 10 1.877e-06 2.388e-06 2.888e-06 0.00% Amr::initialInit() 1 1.227e-06 1.674e-06 2.047e-06 0.00% DistributionMapping::Distribute() 1 9.12e-07 1.144e-06 1.379e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.717 3.719 3.719 100.00% Amr::coarseTimeStep() 10 3.445 3.445 3.445 92.61% Amr::timeStep() 10 3.433 3.434 3.435 92.35% Castro::advance() 10 3.417 3.418 3.418 91.90% Castro::subcycle_advance_ctu() 10 3.342 3.348 3.358 90.28% Castro::do_advance_ctu() 10 3.342 3.347 3.358 90.28% Castro::construct_ctu_hydro_source() 10 2.147 2.407 2.504 67.32% Gravity::make_radial_gravity() 21 0.3565 0.37 0.3948 10.62% Amr::init() 1 0.2565 0.2567 0.2568 6.90% Gravity::get_new_grav_vector() 11 0.244 0.247 0.2485 6.68% Amr::initialInit() 1 0.2374 0.2382 0.2388 6.42% Castro::construct_old_gravity() 10 0.2035 0.2149 0.234 6.29% Gravity::get_old_grav_vector() 10 0.2027 0.2141 0.2334 6.28% FillPatchIterator::Initialize 41 0.1846 0.1968 0.2201 5.92% Castro::construct_new_gravity() 10 0.206 0.2078 0.2088 5.61% Amr::InitializeInit() 1 0.06126 0.1141 0.1949 5.24% Amr::defBaseLevel() 1 0.06126 0.1141 0.1949 5.24% FillPatchSingleLevel 41 0.1301 0.1501 0.1908 5.13% Castro::initialize_do_advance() 10 0.1709 0.1784 0.1857 4.99% Amr::FinalizeInit() 1 0.04384 0.1241 0.1772 4.76% Castro::initData() 1 0.04497 0.09586 0.1723 4.63% Castro::estTimeStep() 21 0.02764 0.1106 0.1614 4.34% FabArray::ParallelCopy() 41 0.08741 0.1079 0.1536 4.13% Castro::computeInitialDt() 2 0.002561 0.08352 0.1363 3.66% Castro::expand_state() 10 0.1205 0.13 0.1358 3.65% FabArray::ParallelCopy_finish() 41 0.03894 0.06335 0.1255 3.37% Castro::clean_state() 62 0.1101 0.1175 0.1226 3.30% Castro::initialize_advance() 10 0.05932 0.07031 0.07583 2.04% Castro::computeTemp() 63 0.06506 0.07002 0.0741 1.99% FabArray::setVal() 143 0.05621 0.06704 0.07127 1.92% Castro::do_new_sources() 10 0.05366 0.06282 0.06508 1.75% Castro::reset_internal_energy(MultiFab) 63 0.04712 0.05074 0.05384 1.45% Castro::reset_internal_energy(Fab) 1008 0.04684 0.05043 0.05351 1.44% FabArray::ParallelCopy_nowait() 41 0.02807 0.0445 0.05008 1.35% Castro::do_old_sources() 10 0.03333 0.04513 0.04881 1.31% StateDataPhysBCFunct::() 41 0.03718 0.04206 0.04627 1.24% StateData::FillBoundary(geom) 41 0.03708 0.04194 0.04613 1.24% Castro::normalize_species() 62 0.03961 0.04176 0.04381 1.18% Castro::post_init() 1 0.03941 0.04002 0.04059 1.09% Castro::construct_new_source() 50 0.02477 0.02918 0.03047 0.82% Amr::writePlotFile() 2 0.02821 0.02892 0.02983 0.80% Gravity::interpolate_monopole_grav() 21 0.02665 0.02772 0.02861 0.77% Castro::construct_new_gravity_source() 10 0.01993 0.02268 0.02364 0.64% VisMF::Write(FabArray) 2 0.01268 0.01424 0.01838 0.49% Castro::post_timestep() 10 0.01484 0.01616 0.01681 0.45% Castro::apply_source_to_state() 20 0.008697 0.01433 0.0165 0.44% MultiFab::Saxpy() 20 0.00866 0.01428 0.01645 0.44% Castro::Castro() 1 0.01053 0.01168 0.01443 0.39% Castro::check_for_nan() 20 0.009669 0.01129 0.01273 0.34% MultiFab::contains_nan() 20 0.009647 0.01126 0.0127 0.34% FabArray::setDomainBndry() 41 0.004946 0.01028 0.01219 0.33% Castro::construct_old_source() 50 0.00506 0.01016 0.0121 0.33% Castro::construct_old_gravity_source() 10 0.005023 0.01009 0.01202 0.32% Castro::initMFs() 1 0.006677 0.007774 0.01027 0.28% AmrLevel::AmrLevel(dm) 1 0.005563 0.006313 0.008145 0.22% StateData::define() 4 0.005539 0.006295 0.008123 0.22% Castro::enforce_min_density() 62 0.005922 0.006682 0.007391 0.20% Castro::computeNewDt() 9 0.007354 0.007375 0.007382 0.20% Castro::swap_state_time_levels() 10 0.003281 0.004847 0.006534 0.18% Castro::post_regrid() 1 0.001608 0.001944 0.002901 0.08% Castro::buildMetrics() 1 0.001716 0.001956 0.002563 0.07% Castro::finalize_do_advance() 10 0.0007887 0.001407 0.001589 0.04% Amr::InitAmr() 1 0.0002938 0.0003662 0.0005178 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.18e-05 0.0001965 0.0002859 0.01% DistributionMapping::LeastUsedCPUs() 1 6.483e-06 0.00019 0.0002786 0.01% Castro::enforce_consistent_e() 1 7.86e-05 0.0001048 0.0001727 0.00% FabArrayBase::getCPC() 41 7.62e-05 8.349e-05 9.07e-05 0.00% Castro::finalize_advance() 10 5.926e-05 6.522e-05 7.469e-05 0.00% Amr::writeSmallPlotFile() 1 3.144e-05 6.066e-05 7.03e-05 0.00% Castro::enforce_speed_limit() 62 2.711e-05 2.974e-05 3.433e-05 0.00% FabArrayBase::CPC::define() 2 2.017e-05 2.597e-05 2.942e-05 0.00% Gravity::swapTimeLevels() 10 7.106e-06 1.456e-05 2.164e-05 0.00% Amr::initSubcycle() 1 8.136e-06 1.025e-05 1.495e-05 0.00% Castro::create_source_corrector() 10 6.488e-06 9.979e-06 1.24e-05 0.00% Gravity::set_mass_offset() 10 6.75e-06 9.734e-06 1.152e-05 0.00% Castro::FluxRegCrseInit 10 5.89e-06 9.082e-06 1.132e-05 0.00% Castro::retry_advance_ctu() 10 4.844e-06 6.333e-06 7.564e-06 0.00% Castro::FluxRegFineAdd() 10 1.877e-06 2.388e-06 2.888e-06 0.00% DistributionMapping::Distribute() 1 9.12e-07 1.144e-06 1.379e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.09-18-g3e5cc7780280) finalized