MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.09-24-gb84d7c069cef) initialized Starting run at 05:39:24 UTC on 2022-09-28. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.09-24-gb84d7c069 Microphysics git describe: 22.09-15-g9bf53bb5 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016327036 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.361555045 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.342956958 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.340535986 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.341437055 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.35223224 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.352514174 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338666016 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339573039 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.339406054 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339627672 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010471439 seconds Ending run at 05:39:28 UTC on 2022-09-28. Run time = 3.678134341 Run time without initialization = 3.467019707 Average number of zones advanced per microsecond: 0.756 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.675 ... 3.678 ... 3.678 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1493 2.4203 2.5176 68.45% Castro::do_advance_ctu() 10 0.03215 0.1327 0.4072 11.07% Gravity::make_radial_gravity() 21 0.3411 0.3537 0.3778 10.27% Castro::initData() 1 0.03935 0.08494 0.136 3.70% Castro::estTimeStep() 21 0.02725 0.08555 0.1315 3.57% FabArray::ParallelCopy_finish() 41 0.04686 0.06395 0.1263 3.43% FabArray::setVal() 143 0.05925 0.06799 0.07009 1.91% Castro::reset_internal_energy(Fab) 1008 0.04752 0.05017 0.05219 1.42% FabArray::ParallelCopy_nowait() 41 0.02756 0.04474 0.0505 1.37% StateData::FillBoundary(geom) 41 0.03668 0.04235 0.04675 1.27% Castro::normalize_species() 62 0.03982 0.04143 0.04242 1.15% FillPatchIterator::Initialize 41 0.02423 0.03622 0.04036 1.10% Gravity::interpolate_monopole_grav() 21 0.02671 0.02752 0.02789 0.76% Castro::construct_new_gravity_source() 10 0.02006 0.02287 0.02423 0.66% Castro::expand_state() 10 0.009979 0.01876 0.02205 0.60% Castro::computeTemp() 63 0.01801 0.01892 0.01978 0.54% Castro::initialize_do_advance() 10 0.0101 0.01741 0.01942 0.53% VisMF::Write(FabArray) 2 0.01325 0.01396 0.01683 0.46% MultiFab::Saxpy() 20 0.008692 0.01435 0.01618 0.44% Amr::writePlotFile() 2 0.01023 0.01297 0.01389 0.38% Gravity::get_new_grav_vector() 11 0.008384 0.01153 0.01297 0.35% FabArray::setDomainBndry() 41 0.004738 0.01036 0.0124 0.34% MultiFab::contains_nan() 20 0.009347 0.01098 0.01203 0.33% Castro::construct_old_gravity_source() 10 0.004981 0.01011 0.01163 0.32% Castro::initMFs() 1 0.006684 0.007802 0.01041 0.28% Gravity::get_old_grav_vector() 10 0.005314 0.009181 0.01039 0.28% Castro::initialize_advance() 10 0.004068 0.008985 0.01032 0.28% StateData::define() 4 0.005582 0.006358 0.008267 0.22% main() 1 0.004537 0.006801 0.007309 0.20% Castro::construct_new_source() 50 0.004775 0.006483 0.007029 0.19% Castro::enforce_min_density() 62 0.00523 0.005978 0.006375 0.17% Castro::swap_state_time_levels() 10 0.003308 0.004401 0.004721 0.13% Amr::coarseTimeStep() 10 0.001271 0.002065 0.003739 0.10% Castro::buildMetrics() 1 0.001567 0.001808 0.002371 0.06% Castro::finalize_do_advance() 10 0.000655 0.001482 0.001786 0.05% Amr::InitAmr() 1 0.0002935 0.0003684 0.0005015 0.01% Amr::timeStep() 10 0.0001725 0.0002212 0.000438 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002868 0.000313 0.0003347 0.01% DistributionMapping::LeastUsedCPUs() 1 7.648e-06 0.0001832 0.0002719 0.01% Castro::clean_state() 62 0.0001513 0.0001769 0.0001972 0.01% StateDataPhysBCFunct::() 41 9.27e-05 0.0001196 0.0001341 0.00% Castro::enforce_consistent_e() 1 7.997e-05 8.666e-05 9.591e-05 0.00% FabArray::ParallelCopy() 41 6.079e-05 8.279e-05 9.215e-05 0.00% Castro::do_old_sources() 10 4.281e-05 7.08e-05 9.067e-05 0.00% Castro::do_new_sources() 10 4.098e-05 7.238e-05 8.853e-05 0.00% Castro::construct_old_source() 50 3.132e-05 7.143e-05 8.781e-05 0.00% Castro::subcycle_advance_ctu() 10 3.535e-05 5.865e-05 7.931e-05 0.00% Castro::Castro() 1 5.329e-05 6.44e-05 7.461e-05 0.00% Amr::FinalizeInit() 1 3.661e-06 1.322e-05 7.347e-05 0.00% FillPatchSingleLevel 41 5.281e-05 6.289e-05 7.203e-05 0.00% Castro::construct_old_gravity() 10 3.339e-05 5.288e-05 6.879e-05 0.00% Amr::writeSmallPlotFile() 1 4.406e-05 6.185e-05 6.879e-05 0.00% Castro::apply_source_to_state() 20 3.584e-05 5.065e-05 6.557e-05 0.00% Castro::finalize_advance() 10 5.019e-05 5.598e-05 6.033e-05 0.00% Castro::advance() 10 3.057e-05 4.294e-05 5.154e-05 0.00% FabArrayBase::getCPC() 41 4.173e-05 4.714e-05 4.979e-05 0.00% Castro::construct_new_gravity() 10 3.526e-05 4.485e-05 4.834e-05 0.00% Amr::defBaseLevel() 1 2.621e-05 2.934e-05 3.539e-05 0.00% Castro::enforce_speed_limit() 62 2.323e-05 2.857e-05 3.2e-05 0.00% Castro::check_for_nan() 20 1.952e-05 2.476e-05 3.089e-05 0.00% FabArrayBase::CPC::define() 2 2.138e-05 2.519e-05 2.87e-05 0.00% Castro::post_timestep() 10 1.394e-05 2.074e-05 2.562e-05 0.00% Gravity::swapTimeLevels() 10 5.719e-06 1.181e-05 1.609e-05 0.00% Amr::initSubcycle() 1 8.071e-06 1.005e-05 1.533e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.168e-06 1.078e-05 1.528e-05 0.00% Castro::create_source_corrector() 10 6.856e-06 1.072e-05 1.43e-05 0.00% Gravity::set_mass_offset() 10 6.701e-06 1.013e-05 1.21e-05 0.00% Castro::post_init() 1 3.383e-06 5.115e-06 1.202e-05 0.00% Castro::FluxRegCrseInit 10 5.795e-06 9.051e-06 1.155e-05 0.00% Castro::computeNewDt() 9 8.028e-06 9.534e-06 1.074e-05 0.00% Castro::retry_advance_ctu() 10 4.407e-06 6.089e-06 7.496e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.778e-06 5.04e-06 6.85e-06 0.00% Amr::init() 1 1.857e-06 2.73e-06 6.716e-06 0.00% Amr::InitializeInit() 1 1.886e-06 3.722e-06 6.577e-06 0.00% Castro::computeInitialDt() 2 3.184e-06 4.276e-06 5.023e-06 0.00% Castro::post_regrid() 1 1.823e-06 3.166e-06 4.131e-06 0.00% Castro::FluxRegFineAdd() 10 1.624e-06 2.612e-06 3.636e-06 0.00% Amr::initialInit() 1 1.134e-06 1.427e-06 1.788e-06 0.00% DistributionMapping::Distribute() 1 9.71e-07 1.2e-06 1.468e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.675 3.678 3.678 100.00% Amr::coarseTimeStep() 10 3.449 3.449 3.449 93.78% Amr::timeStep() 10 3.437 3.439 3.44 93.51% Castro::advance() 10 3.422 3.423 3.423 93.06% Castro::subcycle_advance_ctu() 10 3.351 3.353 3.362 91.40% Castro::do_advance_ctu() 10 3.351 3.353 3.362 91.40% Castro::construct_ctu_hydro_source() 10 2.149 2.42 2.518 68.45% Gravity::make_radial_gravity() 21 0.3411 0.3537 0.3778 10.27% Gravity::get_new_grav_vector() 11 0.2282 0.2331 0.2354 6.40% Castro::construct_old_gravity() 10 0.1988 0.2102 0.2293 6.23% Gravity::get_old_grav_vector() 10 0.198 0.2095 0.2288 6.22% FillPatchIterator::Initialize 41 0.1907 0.198 0.2198 5.97% Amr::init() 1 0.2104 0.2106 0.2107 5.73% Castro::construct_new_gravity() 10 0.201 0.205 0.2068 5.62% Amr::initialInit() 1 0.194 0.1942 0.1945 5.29% FillPatchSingleLevel 41 0.1386 0.1514 0.1908 5.19% Castro::initialize_do_advance() 10 0.1681 0.1805 0.1875 5.10% Amr::InitializeInit() 1 0.05967 0.107 0.1627 4.42% Amr::defBaseLevel() 1 0.05967 0.107 0.1627 4.42% FabArray::ParallelCopy() 41 0.09619 0.1088 0.154 4.19% Castro::initData() 1 0.04318 0.08873 0.1398 3.80% Castro::expand_state() 10 0.1236 0.1329 0.1376 3.74% Amr::FinalizeInit() 1 0.03155 0.08719 0.1348 3.66% Castro::estTimeStep() 21 0.02725 0.08555 0.1315 3.57% FabArray::ParallelCopy_finish() 41 0.04686 0.06395 0.1263 3.43% Castro::clean_state() 62 0.1102 0.1161 0.1188 3.23% Castro::computeInitialDt() 2 0.001975 0.05784 0.1053 2.86% Castro::computeTemp() 63 0.0659 0.0694 0.07213 1.96% Castro::initialize_advance() 10 0.05967 0.06953 0.07209 1.96% FabArray::setVal() 143 0.05925 0.06799 0.07009 1.91% Castro::do_new_sources() 10 0.05425 0.06303 0.06502 1.77% Castro::reset_internal_energy(MultiFab) 63 0.04782 0.05048 0.05252 1.43% Castro::reset_internal_energy(Fab) 1008 0.04752 0.05017 0.05219 1.42% FabArray::ParallelCopy_nowait() 41 0.02764 0.04481 0.05057 1.37% Castro::do_old_sources() 10 0.03247 0.04504 0.04883 1.33% StateDataPhysBCFunct::() 41 0.03677 0.04247 0.04688 1.27% StateData::FillBoundary(geom) 41 0.03668 0.04235 0.04675 1.27% Castro::normalize_species() 62 0.03982 0.04143 0.04242 1.15% Castro::construct_new_source() 50 0.02483 0.02935 0.03044 0.83% Castro::post_init() 1 0.02865 0.02894 0.02918 0.79% Gravity::interpolate_monopole_grav() 21 0.02671 0.02752 0.02789 0.76% Amr::writePlotFile() 2 0.0267 0.02693 0.0272 0.74% Castro::construct_new_gravity_source() 10 0.02006 0.02287 0.02423 0.66% VisMF::Write(FabArray) 2 0.01325 0.01396 0.01683 0.46% Castro::post_timestep() 10 0.01482 0.01598 0.01671 0.45% Castro::apply_source_to_state() 20 0.008728 0.0144 0.01623 0.44% MultiFab::Saxpy() 20 0.008692 0.01435 0.01618 0.44% Castro::Castro() 1 0.01056 0.0117 0.0146 0.40% FabArray::setDomainBndry() 41 0.004738 0.01036 0.0124 0.34% Castro::check_for_nan() 20 0.009367 0.011 0.01206 0.33% MultiFab::contains_nan() 20 0.009347 0.01098 0.01203 0.33% Castro::construct_old_source() 50 0.005012 0.01018 0.01171 0.32% Castro::construct_old_gravity_source() 10 0.004981 0.01011 0.01163 0.32% Castro::initMFs() 1 0.006684 0.007802 0.01041 0.28% AmrLevel::AmrLevel(dm) 1 0.005592 0.006369 0.008281 0.23% StateData::define() 4 0.005582 0.006358 0.008267 0.22% Castro::computeNewDt() 9 0.007202 0.007215 0.007225 0.20% Castro::enforce_min_density() 62 0.00523 0.005978 0.006375 0.17% Castro::swap_state_time_levels() 10 0.003308 0.004401 0.004721 0.13% Castro::buildMetrics() 1 0.001685 0.001954 0.002585 0.07% Castro::finalize_do_advance() 10 0.000655 0.001482 0.001786 0.05% Castro::post_regrid() 1 0.001514 0.001571 0.001643 0.04% Amr::InitAmr() 1 0.0003025 0.0003784 0.0005169 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.283e-05 0.0001894 0.0002796 0.01% DistributionMapping::LeastUsedCPUs() 1 7.648e-06 0.0001832 0.0002719 0.01% Castro::enforce_consistent_e() 1 7.997e-05 8.666e-05 9.591e-05 0.00% FabArrayBase::getCPC() 41 6.514e-05 7.233e-05 7.719e-05 0.00% Castro::finalize_advance() 10 5.914e-05 6.764e-05 7.376e-05 0.00% Amr::writeSmallPlotFile() 1 4.406e-05 6.185e-05 6.879e-05 0.00% Castro::enforce_speed_limit() 62 2.323e-05 2.857e-05 3.2e-05 0.00% FabArrayBase::CPC::define() 2 2.138e-05 2.519e-05 2.87e-05 0.00% Gravity::swapTimeLevels() 10 5.719e-06 1.181e-05 1.609e-05 0.00% Amr::initSubcycle() 1 8.071e-06 1.005e-05 1.533e-05 0.00% Castro::create_source_corrector() 10 6.856e-06 1.072e-05 1.43e-05 0.00% Gravity::set_mass_offset() 10 6.701e-06 1.013e-05 1.21e-05 0.00% Castro::FluxRegCrseInit 10 5.795e-06 9.051e-06 1.155e-05 0.00% Castro::retry_advance_ctu() 10 4.407e-06 6.089e-06 7.496e-06 0.00% Castro::FluxRegFineAdd() 10 1.624e-06 2.612e-06 3.636e-06 0.00% DistributionMapping::Distribute() 1 9.71e-07 1.2e-06 1.468e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.09-24-gb84d7c069cef) finalized