MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.09-26-gcd07b0d84244) initialized Starting run at 05:39:23 UTC on 2022-09-29. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.09-26-gcd07b0d84 Microphysics git describe: 22.09-15-g9bf53bb5 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015101635 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.356949136 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.341011329 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.340642793 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.34116704 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.349896173 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.349654016 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.336352 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.336721491 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.336949182 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339557367 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.048391778 seconds Ending run at 05:39:26 UTC on 2022-09-29. Run time = 3.671870973 Run time without initialization = 3.484790811 Average number of zones advanced per microsecond: 0.752 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.669 ... 3.671 ... 3.672 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0770 2.3905 2.5097 68.35% Castro::do_advance_ctu() 10 0.02781 0.1487 0.4659 12.69% Gravity::make_radial_gravity() 21 0.3359 0.3519 0.3812 10.38% FabArray::ParallelCopy_finish() 41 0.04166 0.06228 0.1249 3.40% Castro::initData() 1 0.03946 0.07919 0.1199 3.26% Castro::estTimeStep() 21 0.02645 0.06972 0.1127 3.07% FabArray::setVal() 143 0.06059 0.06828 0.07011 1.91% Amr::writePlotFile() 2 0.04794 0.05055 0.05186 1.41% Castro::reset_internal_energy(Fab) 1008 0.04448 0.04903 0.05088 1.39% FabArray::ParallelCopy_nowait() 41 0.02676 0.04454 0.04995 1.36% StateData::FillBoundary(geom) 41 0.03509 0.0418 0.04587 1.25% Castro::normalize_species() 62 0.03806 0.04074 0.04176 1.14% FillPatchIterator::Initialize 41 0.02355 0.03575 0.04023 1.10% Gravity::interpolate_monopole_grav() 21 0.02516 0.02712 0.0283 0.77% Castro::construct_new_gravity_source() 10 0.01984 0.02278 0.0238 0.65% Castro::expand_state() 10 0.009715 0.01869 0.02246 0.61% Castro::computeTemp() 63 0.0171 0.01854 0.01985 0.54% Castro::initialize_do_advance() 10 0.009386 0.01732 0.01936 0.53% MultiFab::Saxpy() 20 0.008495 0.0142 0.0161 0.44% VisMF::Write(FabArray) 2 0.01203 0.01319 0.01576 0.43% Gravity::get_new_grav_vector() 11 0.007242 0.01137 0.01339 0.36% FabArray::setDomainBndry() 41 0.004763 0.01039 0.0127 0.35% MultiFab::contains_nan() 20 0.009607 0.01094 0.0124 0.34% Castro::construct_old_gravity_source() 10 0.004893 0.01001 0.01164 0.32% Gravity::get_old_grav_vector() 10 0.005394 0.009357 0.01108 0.30% Castro::initialize_advance() 10 0.006614 0.009914 0.01066 0.29% Castro::initMFs() 1 0.006529 0.007686 0.009989 0.27% StateData::define() 4 0.005543 0.006391 0.008154 0.22% Castro::construct_new_source() 50 0.004726 0.006436 0.007055 0.19% main() 1 0.004269 0.006101 0.006935 0.19% Castro::enforce_min_density() 62 0.005024 0.006051 0.006727 0.18% Castro::swap_state_time_levels() 10 0.003285 0.004274 0.004623 0.13% Amr::coarseTimeStep() 10 0.0008176 0.001614 0.003614 0.10% Castro::buildMetrics() 1 0.001574 0.001819 0.002309 0.06% Castro::finalize_do_advance() 10 0.000631 0.001429 0.001666 0.05% Amr::InitAmr() 1 0.0003071 0.0003768 0.0005175 0.01% Amr::timeStep() 10 0.0001713 0.0002106 0.0003768 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002747 0.0003095 0.000359 0.01% DistributionMapping::LeastUsedCPUs() 1 6.613e-06 0.0001929 0.0002789 0.01% Castro::clean_state() 62 0.0001457 0.0001658 0.0001926 0.01% StateDataPhysBCFunct::() 41 8.967e-05 0.000114 0.000127 0.00% Castro::construct_old_source() 50 3.376e-05 7.105e-05 9.999e-05 0.00% FabArray::ParallelCopy() 41 6.201e-05 8.185e-05 9.345e-05 0.00% Castro::enforce_consistent_e() 1 7.681e-05 8.373e-05 8.954e-05 0.00% Castro::do_new_sources() 10 4.161e-05 7.021e-05 8.639e-05 0.00% Castro::do_old_sources() 10 3.782e-05 6.684e-05 8.113e-05 0.00% Amr::FinalizeInit() 1 3.592e-06 1.393e-05 8.002e-05 0.00% Castro::subcycle_advance_ctu() 10 3.349e-05 5.284e-05 7.875e-05 0.00% Castro::Castro() 1 4.876e-05 5.885e-05 7.709e-05 0.00% FillPatchSingleLevel 41 5.965e-05 6.788e-05 7.651e-05 0.00% Amr::writeSmallPlotFile() 1 2.499e-05 4.39e-05 6.807e-05 0.00% Castro::construct_new_gravity() 10 3.459e-05 4.885e-05 6.606e-05 0.00% Castro::construct_old_gravity() 10 3.292e-05 5.337e-05 6.568e-05 0.00% Castro::advance() 10 3.186e-05 4.59e-05 6.547e-05 0.00% Castro::apply_source_to_state() 20 3.375e-05 4.918e-05 5.778e-05 0.00% Castro::finalize_advance() 10 4.846e-05 5.295e-05 5.72e-05 0.00% FabArrayBase::getCPC() 41 4.128e-05 4.932e-05 5.676e-05 0.00% FabArrayBase::CPC::define() 2 2.253e-05 2.745e-05 3.754e-05 0.00% Castro::enforce_speed_limit() 62 2.042e-05 2.686e-05 3.213e-05 0.00% Amr::defBaseLevel() 1 2.462e-05 2.695e-05 3.199e-05 0.00% Castro::check_for_nan() 20 1.776e-05 2.49e-05 2.909e-05 0.00% Castro::post_timestep() 10 1.18e-05 1.613e-05 2.676e-05 0.00% Gravity::swapTimeLevels() 10 6.385e-06 1.291e-05 1.705e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.241e-06 1.049e-05 1.413e-05 0.00% Amr::initSubcycle() 1 7.961e-06 1.001e-05 1.39e-05 0.00% Castro::create_source_corrector() 10 5.5e-06 9.804e-06 1.36e-05 0.00% Castro::FluxRegCrseInit 10 4.797e-06 8.761e-06 1.318e-05 0.00% Castro::computeNewDt() 9 6.919e-06 9.576e-06 1.238e-05 0.00% Gravity::set_mass_offset() 10 6.39e-06 9.728e-06 1.217e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.373e-06 4.967e-06 9.093e-06 0.00% Amr::InitializeInit() 1 2.129e-06 4.375e-06 8.221e-06 0.00% Castro::retry_advance_ctu() 10 4.064e-06 5.879e-06 7.536e-06 0.00% Castro::post_init() 1 3.356e-06 4.085e-06 4.987e-06 0.00% Castro::computeInitialDt() 2 3.099e-06 3.607e-06 4.718e-06 0.00% Castro::post_regrid() 1 1.828e-06 2.573e-06 4.08e-06 0.00% Castro::FluxRegFineAdd() 10 1.897e-06 2.488e-06 3.401e-06 0.00% Amr::init() 1 1.513e-06 2.167e-06 2.742e-06 0.00% Amr::initialInit() 1 1.143e-06 1.409e-06 1.686e-06 0.00% DistributionMapping::Distribute() 1 9.7e-07 1.188e-06 1.453e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.669 3.671 3.672 100.00% Amr::coarseTimeStep() 10 3.43 3.43 3.43 93.40% Amr::timeStep() 10 3.418 3.42 3.421 93.16% Castro::advance() 10 3.404 3.404 3.405 92.72% Castro::subcycle_advance_ctu() 10 3.332 3.334 3.341 90.99% Castro::do_advance_ctu() 10 3.331 3.334 3.341 90.99% Castro::construct_ctu_hydro_source() 10 2.077 2.39 2.51 68.35% Gravity::make_radial_gravity() 21 0.3359 0.3519 0.3812 10.38% Gravity::get_new_grav_vector() 11 0.2257 0.2307 0.2322 6.32% Castro::construct_old_gravity() 10 0.1957 0.2105 0.2321 6.32% Gravity::get_old_grav_vector() 10 0.1948 0.2097 0.2316 6.31% FillPatchIterator::Initialize 41 0.185 0.1951 0.2153 5.86% Castro::construct_new_gravity() 10 0.1999 0.2041 0.2054 5.59% Castro::initialize_do_advance() 10 0.1637 0.1775 0.1873 5.10% FillPatchSingleLevel 41 0.1333 0.149 0.187 5.09% Amr::init() 1 0.1864 0.1866 0.1866 5.08% Amr::initialInit() 1 0.1709 0.1713 0.1715 4.67% FabArray::ParallelCopy() 41 0.09004 0.107 0.1518 4.13% Amr::InitializeInit() 1 0.05928 0.1009 0.1413 3.85% Amr::defBaseLevel() 1 0.05928 0.1009 0.1413 3.85% Castro::expand_state() 10 0.1224 0.1305 0.1379 3.75% FabArray::ParallelCopy_finish() 41 0.04166 0.06228 0.1249 3.40% Castro::initData() 1 0.04323 0.08288 0.1234 3.36% Castro::clean_state() 62 0.1043 0.1139 0.1179 3.21% Castro::estTimeStep() 21 0.02645 0.06972 0.1127 3.07% Amr::FinalizeInit() 1 0.02959 0.07038 0.1122 3.06% Castro::computeInitialDt() 2 0.001715 0.0423 0.08399 2.29% Castro::initialize_advance() 10 0.06242 0.0705 0.07288 1.98% Castro::computeTemp() 63 0.06188 0.06787 0.07103 1.93% FabArray::setVal() 143 0.06059 0.06828 0.07011 1.91% Castro::do_new_sources() 10 0.053 0.06251 0.0647 1.76% Amr::writePlotFile() 2 0.06359 0.06374 0.06395 1.74% Castro::reset_internal_energy(MultiFab) 63 0.04478 0.04934 0.05118 1.39% Castro::reset_internal_energy(Fab) 1008 0.04448 0.04903 0.05088 1.39% FabArray::ParallelCopy_nowait() 41 0.02683 0.04461 0.05003 1.36% Castro::do_old_sources() 10 0.0317 0.04467 0.04859 1.32% StateDataPhysBCFunct::() 41 0.03518 0.04192 0.04598 1.25% StateData::FillBoundary(geom) 41 0.03509 0.0418 0.04587 1.25% Castro::normalize_species() 62 0.03806 0.04074 0.04176 1.14% Castro::construct_new_source() 50 0.02457 0.02922 0.03063 0.83% Gravity::interpolate_monopole_grav() 21 0.02516 0.02712 0.0283 0.77% Castro::post_init() 1 0.02721 0.02742 0.02759 0.75% Castro::construct_new_gravity_source() 10 0.01984 0.02278 0.0238 0.65% Castro::apply_source_to_state() 20 0.008528 0.01425 0.01616 0.44% Castro::post_timestep() 10 0.01415 0.01542 0.01614 0.44% MultiFab::Saxpy() 20 0.008495 0.0142 0.0161 0.44% VisMF::Write(FabArray) 2 0.01203 0.01319 0.01576 0.43% Castro::Castro() 1 0.01016 0.01139 0.01412 0.38% FabArray::setDomainBndry() 41 0.004763 0.01039 0.0127 0.35% Castro::check_for_nan() 20 0.009634 0.01096 0.01243 0.34% MultiFab::contains_nan() 20 0.009607 0.01094 0.0124 0.34% Castro::construct_old_source() 50 0.004927 0.01008 0.01174 0.32% Castro::construct_old_gravity_source() 10 0.004893 0.01001 0.01164 0.32% Castro::initMFs() 1 0.006529 0.007686 0.009989 0.27% AmrLevel::AmrLevel(dm) 1 0.005554 0.006401 0.008166 0.22% StateData::define() 4 0.005543 0.006391 0.008154 0.22% Castro::computeNewDt() 9 0.007026 0.007036 0.007043 0.19% Castro::enforce_min_density() 62 0.005024 0.006051 0.006727 0.18% Castro::swap_state_time_levels() 10 0.003285 0.004274 0.004623 0.13% Castro::buildMetrics() 1 0.001688 0.001965 0.002524 0.07% Castro::finalize_do_advance() 10 0.000631 0.001429 0.001666 0.05% Castro::post_regrid() 1 0.001509 0.001569 0.001642 0.04% Amr::InitAmr() 1 0.0003157 0.0003868 0.0005312 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.241e-05 0.0001991 0.0002886 0.01% DistributionMapping::LeastUsedCPUs() 1 6.613e-06 0.0001929 0.0002789 0.01% Castro::enforce_consistent_e() 1 7.681e-05 8.373e-05 8.954e-05 0.00% FabArrayBase::getCPC() 41 6.867e-05 7.678e-05 8.597e-05 0.00% Castro::finalize_advance() 10 5.715e-05 6.42e-05 7.319e-05 0.00% Amr::writeSmallPlotFile() 1 2.499e-05 4.39e-05 6.807e-05 0.00% FabArrayBase::CPC::define() 2 2.253e-05 2.745e-05 3.754e-05 0.00% Castro::enforce_speed_limit() 62 2.042e-05 2.686e-05 3.213e-05 0.00% Gravity::swapTimeLevels() 10 6.385e-06 1.291e-05 1.705e-05 0.00% Amr::initSubcycle() 1 7.961e-06 1.001e-05 1.39e-05 0.00% Castro::create_source_corrector() 10 5.5e-06 9.804e-06 1.36e-05 0.00% Castro::FluxRegCrseInit 10 4.797e-06 8.761e-06 1.318e-05 0.00% Gravity::set_mass_offset() 10 6.39e-06 9.728e-06 1.217e-05 0.00% Castro::retry_advance_ctu() 10 4.064e-06 5.879e-06 7.536e-06 0.00% Castro::FluxRegFineAdd() 10 1.897e-06 2.488e-06 3.401e-06 0.00% DistributionMapping::Distribute() 1 9.7e-07 1.188e-06 1.453e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.09-26-gcd07b0d84244) finalized