MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.09-27-gd65e09e4a85d) initialized Starting run at 05:39:13 UTC on 2022-09-30. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.09-27-gd65e09e4a Microphysics git describe: 22.09-15-g9bf53bb5 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015319742 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.370081737 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.344317677 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.341912995 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342786589 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.354915649 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.354070006 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338833606 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.340292304 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.339209587 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339238656 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010501926 seconds Ending run at 05:39:16 UTC on 2022-09-30. Run time = 3.667207761 Run time without initialization = 3.48401742 Average number of zones advanced per microsecond: 0.752 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.667 ... 3.667 ... 3.667 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1210 2.4119 2.5194 68.70% Castro::do_advance_ctu() 10 0.04534 0.1509 0.4456 12.15% Gravity::make_radial_gravity() 21 0.3403 0.3528 0.3751 10.23% Castro::initData() 1 0.03944 0.07971 0.1167 3.18% FabArray::ParallelCopy_finish() 41 0.04517 0.0632 0.1153 3.15% Castro::estTimeStep() 21 0.02947 0.0675 0.1067 2.91% FabArray::setVal() 143 0.0632 0.07037 0.073 1.99% Castro::reset_internal_energy(Fab) 1008 0.04903 0.05017 0.05111 1.39% FabArray::ParallelCopy_nowait() 41 0.02867 0.04484 0.05019 1.37% StateData::FillBoundary(geom) 41 0.03585 0.0422 0.04629 1.26% Castro::normalize_species() 62 0.04032 0.04157 0.04236 1.15% FillPatchIterator::Initialize 41 0.02456 0.03618 0.04057 1.11% Gravity::interpolate_monopole_grav() 21 0.02602 0.02742 0.02794 0.76% Castro::construct_new_gravity_source() 10 0.02029 0.02296 0.02396 0.65% Castro::expand_state() 10 0.009898 0.01884 0.02237 0.61% Castro::initialize_do_advance() 10 0.01021 0.01759 0.02009 0.55% Castro::computeTemp() 63 0.01781 0.01904 0.01989 0.54% MultiFab::Saxpy() 20 0.01065 0.01475 0.01643 0.45% VisMF::Write(FabArray) 2 0.01243 0.0132 0.01586 0.43% Amr::writePlotFile() 2 0.01019 0.01302 0.01391 0.38% Gravity::get_new_grav_vector() 11 0.007414 0.01149 0.01273 0.35% FabArray::setDomainBndry() 41 0.004825 0.01052 0.01254 0.34% MultiFab::contains_nan() 20 0.009909 0.01121 0.01254 0.34% Castro::construct_old_gravity_source() 10 0.004909 0.01023 0.01217 0.33% Castro::initialize_advance() 10 0.0106 0.01088 0.01174 0.32% Gravity::get_old_grav_vector() 10 0.005605 0.009499 0.01112 0.30% Castro::initMFs() 1 0.00671 0.007266 0.008165 0.22% main() 1 0.006439 0.006898 0.007223 0.20% Castro::construct_new_source() 50 0.004769 0.006531 0.007134 0.19% Castro::enforce_min_density() 62 0.005752 0.006154 0.006578 0.18% StateData::define() 4 0.005543 0.005866 0.006363 0.17% Castro::swap_state_time_levels() 10 0.003484 0.004709 0.005606 0.15% Amr::coarseTimeStep() 10 0.001083 0.001839 0.004179 0.11% Castro::finalize_do_advance() 10 0.0006596 0.00153 0.00185 0.05% Castro::buildMetrics() 1 0.001564 0.001676 0.001831 0.05% Amr::InitAmr() 1 0.0002627 0.0003014 0.0004489 0.01% Amr::timeStep() 10 0.0001756 0.0002293 0.0003661 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002996 0.0003164 0.0003463 0.01% Castro::clean_state() 62 0.0001572 0.000181 0.0002211 0.01% DistributionMapping::LeastUsedCPUs() 1 7.897e-06 0.0001679 0.0002043 0.01% StateDataPhysBCFunct::() 41 0.0001025 0.0001188 0.0001353 0.00% Castro::enforce_consistent_e() 1 7.508e-05 8.892e-05 0.0001095 0.00% Castro::construct_old_source() 50 3.994e-05 7.396e-05 9.966e-05 0.00% Castro::do_new_sources() 10 5.356e-05 7.551e-05 9.514e-05 0.00% FabArray::ParallelCopy() 41 7.629e-05 8.506e-05 9.098e-05 0.00% Amr::FinalizeInit() 1 3.389e-06 1.458e-05 8.514e-05 0.00% Castro::do_old_sources() 10 4.271e-05 6.876e-05 8.014e-05 0.00% Castro::Castro() 1 5.22e-05 6.205e-05 7.712e-05 0.00% FillPatchSingleLevel 41 6.454e-05 6.938e-05 7.336e-05 0.00% Castro::subcycle_advance_ctu() 10 4.301e-05 6.13e-05 7.074e-05 0.00% Amr::writeSmallPlotFile() 1 2.479e-05 5.61e-05 6.912e-05 0.00% FabArrayBase::getCPC() 41 4.852e-05 5.505e-05 6.67e-05 0.00% Castro::apply_source_to_state() 20 4.297e-05 5.259e-05 6.46e-05 0.00% Castro::construct_old_gravity() 10 3.97e-05 5.454e-05 6.147e-05 0.00% Castro::finalize_advance() 10 5.172e-05 5.491e-05 5.737e-05 0.00% Castro::advance() 10 3.485e-05 4.763e-05 5.456e-05 0.00% Castro::construct_new_gravity() 10 3.822e-05 4.545e-05 4.983e-05 0.00% Castro::enforce_speed_limit() 62 2.683e-05 2.926e-05 3.196e-05 0.00% FabArrayBase::CPC::define() 2 2.078e-05 2.529e-05 3.145e-05 0.00% Amr::defBaseLevel() 1 2.228e-05 2.54e-05 3.113e-05 0.00% Castro::check_for_nan() 20 2.277e-05 2.452e-05 2.732e-05 0.00% Castro::post_timestep() 10 1.275e-05 1.92e-05 2.496e-05 0.00% Gravity::swapTimeLevels() 10 8.6e-06 1.262e-05 1.669e-05 0.00% Castro::create_source_corrector() 10 6.299e-06 1.057e-05 1.346e-05 0.00% Castro::post_init() 1 2.982e-06 4.855e-06 1.311e-05 0.00% Gravity::set_mass_offset() 10 7.18e-06 9.787e-06 1.152e-05 0.00% Castro::computeNewDt() 9 8.495e-06 9.504e-06 1.145e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.763e-06 8.75e-06 1.1e-05 0.00% Castro::FluxRegCrseInit 10 6.954e-06 8.903e-06 1.088e-05 0.00% Amr::initSubcycle() 1 8.181e-06 8.769e-06 9.353e-06 0.00% Castro::retry_advance_ctu() 10 3.729e-06 5.706e-06 6.891e-06 0.00% Amr::InitializeInit() 1 2.197e-06 3.671e-06 6.413e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.859e-06 4.748e-06 5.642e-06 0.00% Castro::computeInitialDt() 2 2.803e-06 3.804e-06 4.889e-06 0.00% Castro::post_regrid() 1 1.736e-06 2.475e-06 3.696e-06 0.00% Castro::FluxRegFineAdd() 10 1.725e-06 2.326e-06 3.452e-06 0.00% Amr::init() 1 1.586e-06 2.026e-06 2.533e-06 0.00% Amr::initialInit() 1 1.135e-06 1.454e-06 2.105e-06 0.00% DistributionMapping::Distribute() 1 9.89e-07 1.341e-06 1.889e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.666 3.667 3.667 100.00% Amr::coarseTimeStep() 10 3.466 3.466 3.466 94.52% Amr::timeStep() 10 3.454 3.456 3.457 94.26% Castro::advance() 10 3.439 3.44 3.44 93.81% Castro::subcycle_advance_ctu() 10 3.365 3.366 3.368 91.85% Castro::do_advance_ctu() 10 3.365 3.366 3.368 91.85% Castro::construct_ctu_hydro_source() 10 2.121 2.412 2.519 68.70% Gravity::make_radial_gravity() 21 0.3403 0.3528 0.3751 10.23% Gravity::get_new_grav_vector() 11 0.2255 0.2303 0.2323 6.33% Castro::construct_old_gravity() 10 0.2013 0.2124 0.2302 6.28% Gravity::get_old_grav_vector() 10 0.2003 0.2116 0.2296 6.26% FillPatchIterator::Initialize 41 0.1925 0.1973 0.2096 5.71% Castro::construct_new_gravity() 10 0.201 0.2051 0.2068 5.64% Castro::initialize_do_advance() 10 0.163 0.1808 0.1889 5.15% Amr::init() 1 0.1826 0.1828 0.1828 4.98% FillPatchSingleLevel 41 0.1401 0.1506 0.1802 4.91% Amr::initialInit() 1 0.1669 0.1671 0.1673 4.56% FabArray::ParallelCopy() 41 0.09536 0.1082 0.1442 3.93% Castro::expand_state() 10 0.1237 0.1328 0.1391 3.79% Amr::InitializeInit() 1 0.05986 0.1008 0.1388 3.79% Amr::defBaseLevel() 1 0.05986 0.1008 0.1388 3.79% Castro::initData() 1 0.04345 0.0836 0.1203 3.28% Castro::clean_state() 62 0.1125 0.1165 0.1181 3.22% FabArray::ParallelCopy_finish() 41 0.04517 0.0632 0.1153 3.15% Amr::FinalizeInit() 1 0.02815 0.06628 0.1073 2.93% Castro::estTimeStep() 21 0.02947 0.0675 0.1067 2.91% Castro::computeInitialDt() 2 0.001603 0.03962 0.08063 2.20% Castro::initialize_advance() 10 0.07133 0.07353 0.07483 2.04% FabArray::setVal() 143 0.0632 0.07037 0.073 1.99% Castro::computeTemp() 63 0.06716 0.06953 0.07131 1.94% Castro::do_new_sources() 10 0.05477 0.06335 0.06505 1.77% Castro::reset_internal_energy(MultiFab) 63 0.04935 0.05049 0.05142 1.40% Castro::reset_internal_energy(Fab) 1008 0.04903 0.05017 0.05111 1.39% FabArray::ParallelCopy_nowait() 41 0.02877 0.04492 0.05026 1.37% Castro::do_old_sources() 10 0.03426 0.04556 0.04931 1.34% StateDataPhysBCFunct::() 41 0.03595 0.04232 0.04641 1.27% StateData::FillBoundary(geom) 41 0.03585 0.0422 0.04629 1.26% Castro::normalize_species() 62 0.04032 0.04157 0.04236 1.15% Castro::construct_new_source() 50 0.02506 0.02949 0.0306 0.83% Gravity::interpolate_monopole_grav() 21 0.02602 0.02742 0.02794 0.76% Amr::writePlotFile() 2 0.02605 0.02622 0.02644 0.72% Castro::post_init() 1 0.02576 0.026 0.02625 0.72% Castro::construct_new_gravity_source() 10 0.02029 0.02296 0.02396 0.65% Castro::apply_source_to_state() 20 0.0107 0.0148 0.01649 0.45% Castro::post_timestep() 10 0.01451 0.01597 0.01644 0.45% MultiFab::Saxpy() 20 0.01065 0.01475 0.01643 0.45% VisMF::Write(FabArray) 2 0.01243 0.0132 0.01586 0.43% Castro::check_for_nan() 20 0.009933 0.01123 0.01256 0.34% FabArray::setDomainBndry() 41 0.004825 0.01052 0.01254 0.34% MultiFab::contains_nan() 20 0.009909 0.01121 0.01254 0.34% Castro::construct_old_source() 50 0.004949 0.01031 0.01226 0.33% Castro::construct_old_gravity_source() 10 0.004909 0.01023 0.01217 0.33% Castro::Castro() 1 0.01062 0.01115 0.01197 0.33% Castro::initMFs() 1 0.00671 0.007266 0.008165 0.22% Castro::computeNewDt() 9 0.007459 0.007485 0.007496 0.20% Castro::enforce_min_density() 62 0.005752 0.006154 0.006578 0.18% AmrLevel::AmrLevel(dm) 1 0.005552 0.005875 0.006371 0.17% StateData::define() 4 0.005543 0.005866 0.006363 0.17% Castro::swap_state_time_levels() 10 0.003484 0.004709 0.005606 0.15% Castro::buildMetrics() 1 0.001682 0.001807 0.001985 0.05% Castro::finalize_do_advance() 10 0.0006596 0.00153 0.00185 0.05% Castro::post_regrid() 1 0.00151 0.001578 0.001626 0.04% Amr::InitAmr() 1 0.0002712 0.0003102 0.0004581 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.294e-05 0.000174 0.0002104 0.01% DistributionMapping::LeastUsedCPUs() 1 7.897e-06 0.0001679 0.0002043 0.01% Castro::enforce_consistent_e() 1 7.508e-05 8.892e-05 0.0001095 0.00% FabArrayBase::getCPC() 41 7.25e-05 8.035e-05 9.747e-05 0.00% Castro::finalize_advance() 10 6.04e-05 6.614e-05 7.054e-05 0.00% Amr::writeSmallPlotFile() 1 2.479e-05 5.61e-05 6.912e-05 0.00% Castro::enforce_speed_limit() 62 2.683e-05 2.926e-05 3.196e-05 0.00% FabArrayBase::CPC::define() 2 2.078e-05 2.529e-05 3.145e-05 0.00% Gravity::swapTimeLevels() 10 8.6e-06 1.262e-05 1.669e-05 0.00% Castro::create_source_corrector() 10 6.299e-06 1.057e-05 1.346e-05 0.00% Gravity::set_mass_offset() 10 7.18e-06 9.787e-06 1.152e-05 0.00% Castro::FluxRegCrseInit 10 6.954e-06 8.903e-06 1.088e-05 0.00% Amr::initSubcycle() 1 8.181e-06 8.769e-06 9.353e-06 0.00% Castro::retry_advance_ctu() 10 3.729e-06 5.706e-06 6.891e-06 0.00% Castro::FluxRegFineAdd() 10 1.725e-06 2.326e-06 3.452e-06 0.00% DistributionMapping::Distribute() 1 9.89e-07 1.341e-06 1.889e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.09-27-gd65e09e4a85d) finalized