MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-1-g13aa4df0f5a4) initialized Starting run at 05:39:36 UTC on 2022-10-03. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.10-1-g13aa4df0f Microphysics git describe: 22.10 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.017832056 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.358619358 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.344900551 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342739844 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.344421817 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.356114833 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.353860073 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.339443218 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339732775 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.340958209 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.340317297 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010331821 seconds Ending run at 05:39:40 UTC on 2022-10-03. Run time = 3.681105544 Run time without initialization = 3.479132185 Average number of zones advanced per microsecond: 0.753 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.68 ... 3.681 ... 3.681 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1532 2.4290 2.5277 68.67% Castro::do_advance_ctu() 10 0.03397 0.1335 0.4121 11.19% Gravity::make_radial_gravity() 21 0.3564 0.3676 0.3948 10.72% FabArray::ParallelCopy_finish() 41 0.04558 0.06279 0.1228 3.33% Castro::initData() 1 0.06672 0.08812 0.1188 3.23% Castro::estTimeStep() 21 0.02756 0.05866 0.08026 2.18% FabArray::setVal() 143 0.05762 0.06825 0.07075 1.92% Castro::reset_internal_energy(Fab) 1008 0.04726 0.05041 0.05205 1.41% FabArray::ParallelCopy_nowait() 41 0.02803 0.04495 0.05117 1.39% StateData::FillBoundary(geom) 41 0.03598 0.04242 0.04586 1.25% Castro::normalize_species() 62 0.0409 0.0414 0.04266 1.16% FillPatchIterator::Initialize 41 0.02477 0.0363 0.04067 1.10% Gravity::interpolate_monopole_grav() 21 0.02727 0.02787 0.0286 0.78% Castro::construct_new_gravity_source() 10 0.01979 0.02283 0.02411 0.66% Castro::expand_state() 10 0.009908 0.0192 0.02275 0.62% Castro::computeTemp() 63 0.0172 0.01913 0.0198 0.54% Castro::initialize_do_advance() 10 0.01021 0.01753 0.01946 0.53% VisMF::Write(FabArray) 2 0.01266 0.01398 0.0187 0.51% Amr::writePlotFile() 2 0.009713 0.01514 0.01669 0.45% MultiFab::Saxpy() 20 0.008622 0.01421 0.01619 0.44% Gravity::get_new_grav_vector() 11 0.007317 0.0113 0.01281 0.35% FabArray::setDomainBndry() 41 0.004805 0.01041 0.01257 0.34% Castro::construct_old_gravity_source() 10 0.004981 0.01007 0.01186 0.32% MultiFab::contains_nan() 20 0.009715 0.01075 0.01163 0.32% Gravity::get_old_grav_vector() 10 0.005747 0.009526 0.01121 0.30% Castro::initialize_advance() 10 0.006896 0.009953 0.01071 0.29% Castro::initMFs() 1 0.006652 0.007746 0.009883 0.27% StateData::define() 4 0.005553 0.006445 0.008111 0.22% Castro::construct_new_source() 50 0.004814 0.006488 0.0071 0.19% main() 1 0.00618 0.006735 0.007049 0.19% Castro::enforce_min_density() 62 0.005311 0.006113 0.006699 0.18% Castro::swap_state_time_levels() 10 0.003281 0.004424 0.005148 0.14% Amr::coarseTimeStep() 10 0.0008103 0.001552 0.002532 0.07% Castro::buildMetrics() 1 0.00158 0.001833 0.002344 0.06% Castro::finalize_do_advance() 10 0.000652 0.001482 0.001834 0.05% Amr::InitAmr() 1 0.0002623 0.0003652 0.0006283 0.02% DistributionMapping::LeastUsedCPUs() 1 8.17e-06 0.0003255 0.0004487 0.01% Amr::timeStep() 10 0.0001751 0.0002384 0.0004388 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002965 0.0003101 0.0003416 0.01% Castro::clean_state() 62 0.0001489 0.0001696 0.0001821 0.00% Castro::enforce_consistent_e() 1 8.108e-05 9.9e-05 0.00014 0.00% StateDataPhysBCFunct::() 41 0.0001033 0.0001159 0.0001244 0.00% FabArray::ParallelCopy() 41 8.131e-05 8.666e-05 9.279e-05 0.00% Castro::construct_old_source() 50 4.247e-05 7.213e-05 9.181e-05 0.00% Castro::do_new_sources() 10 4.95e-05 7.274e-05 9.171e-05 0.00% Castro::subcycle_advance_ctu() 10 4.177e-05 6.118e-05 8.731e-05 0.00% Castro::do_old_sources() 10 4.262e-05 6.873e-05 8.111e-05 0.00% FillPatchSingleLevel 41 6.601e-05 7.03e-05 7.875e-05 0.00% Amr::FinalizeInit() 1 3.534e-06 1.347e-05 7.597e-05 0.00% Castro::Castro() 1 5.514e-05 6.519e-05 7.315e-05 0.00% Amr::writeSmallPlotFile() 1 3.099e-05 6.169e-05 6.986e-05 0.00% Castro::construct_old_gravity() 10 3.951e-05 5.433e-05 6.488e-05 0.00% Castro::finalize_advance() 10 5.115e-05 5.576e-05 5.995e-05 0.00% FabArrayBase::getCPC() 41 4.474e-05 5.094e-05 5.963e-05 0.00% Castro::advance() 10 3.409e-05 4.919e-05 5.915e-05 0.00% Castro::apply_source_to_state() 20 3.408e-05 4.824e-05 5.794e-05 0.00% Castro::construct_new_gravity() 10 4.199e-05 4.611e-05 4.888e-05 0.00% Amr::defBaseLevel() 1 2.347e-05 2.786e-05 3.514e-05 0.00% Castro::enforce_speed_limit() 62 2.447e-05 2.926e-05 3.491e-05 0.00% FabArrayBase::CPC::define() 2 2.195e-05 2.619e-05 2.907e-05 0.00% Castro::check_for_nan() 20 1.865e-05 2.346e-05 2.656e-05 0.00% Castro::post_timestep() 10 1.301e-05 1.897e-05 2.492e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.857e-06 1.26e-05 2.079e-05 0.00% Gravity::swapTimeLevels() 10 5.956e-06 1.261e-05 1.672e-05 0.00% Gravity::set_mass_offset() 10 5.533e-06 1.026e-05 1.559e-05 0.00% Amr::initSubcycle() 1 7.761e-06 9.928e-06 1.315e-05 0.00% Castro::create_source_corrector() 10 6.781e-06 9.734e-06 1.29e-05 0.00% Castro::computeNewDt() 9 8.565e-06 9.565e-06 1.125e-05 0.00% Castro::FluxRegCrseInit 10 6.137e-06 8.419e-06 1.059e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.569e-06 5.342e-06 7.903e-06 0.00% Amr::InitializeInit() 1 2.138e-06 4.92e-06 7.73e-06 0.00% Castro::retry_advance_ctu() 10 3.41e-06 5.508e-06 6.645e-06 0.00% Castro::computeInitialDt() 2 3.783e-06 4.563e-06 6.411e-06 0.00% Castro::post_init() 1 3.432e-06 3.943e-06 5.453e-06 0.00% Castro::post_regrid() 1 1.827e-06 2.7e-06 4.822e-06 0.00% Amr::init() 1 1.815e-06 2.266e-06 3.014e-06 0.00% Castro::FluxRegFineAdd() 10 1.874e-06 2.216e-06 2.515e-06 0.00% Amr::initialInit() 1 1.171e-06 1.519e-06 2.029e-06 0.00% DistributionMapping::Distribute() 1 9.71e-07 1.176e-06 1.49e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.68 3.681 3.681 100.00% Amr::coarseTimeStep() 10 3.462 3.462 3.462 94.04% Amr::timeStep() 10 3.451 3.452 3.453 93.80% Castro::advance() 10 3.436 3.436 3.437 93.36% Castro::subcycle_advance_ctu() 10 3.363 3.365 3.374 91.65% Castro::do_advance_ctu() 10 3.363 3.365 3.374 91.65% Castro::construct_ctu_hydro_source() 10 2.153 2.429 2.528 68.67% Gravity::make_radial_gravity() 21 0.3564 0.3676 0.3948 10.72% Gravity::get_new_grav_vector() 11 0.2379 0.2442 0.2464 6.69% Castro::construct_old_gravity() 10 0.2058 0.2152 0.2349 6.38% Gravity::get_old_grav_vector() 10 0.2048 0.2144 0.2344 6.37% FillPatchIterator::Initialize 41 0.1884 0.1972 0.2172 5.90% Castro::construct_new_gravity() 10 0.2002 0.2051 0.2073 5.63% Amr::init() 1 0.2011 0.2015 0.2016 5.48% FillPatchSingleLevel 41 0.1367 0.1505 0.1877 5.10% Castro::initialize_do_advance() 10 0.1645 0.1793 0.1854 5.04% Amr::initialInit() 1 0.1824 0.1828 0.1832 4.98% FabArray::ParallelCopy() 41 0.09395 0.1079 0.151 4.10% Amr::InitializeInit() 1 0.08702 0.1106 0.1403 3.81% Amr::defBaseLevel() 1 0.08701 0.1106 0.1403 3.81% Castro::expand_state() 10 0.1192 0.1316 0.1366 3.71% FabArray::ParallelCopy_finish() 41 0.04558 0.06279 0.1228 3.33% Castro::initData() 1 0.07071 0.09235 0.1222 3.32% Castro::clean_state() 62 0.1102 0.1164 0.1186 3.22% Amr::FinalizeInit() 1 0.04246 0.07211 0.09548 2.59% Castro::estTimeStep() 21 0.02756 0.05866 0.08026 2.18% Castro::initialize_advance() 10 0.06166 0.07082 0.07322 1.99% Castro::computeTemp() 63 0.0648 0.06985 0.07216 1.96% FabArray::setVal() 143 0.05762 0.06825 0.07075 1.92% Castro::do_new_sources() 10 0.05336 0.06287 0.06461 1.76% Castro::computeInitialDt() 2 0.001613 0.03117 0.05493 1.49% Castro::reset_internal_energy(MultiFab) 63 0.04761 0.05072 0.05236 1.42% Castro::reset_internal_energy(Fab) 1008 0.04726 0.05041 0.05205 1.41% FabArray::ParallelCopy_nowait() 41 0.02811 0.04502 0.05125 1.39% Castro::do_old_sources() 10 0.03287 0.045 0.04861 1.32% StateDataPhysBCFunct::() 41 0.03608 0.04253 0.04598 1.25% StateData::FillBoundary(geom) 41 0.03598 0.04242 0.04586 1.25% Castro::normalize_species() 62 0.0409 0.0414 0.04266 1.16% Castro::post_init() 1 0.03954 0.03993 0.0403 1.09% Castro::construct_new_source() 50 0.0246 0.02932 0.03065 0.83% Amr::writePlotFile() 2 0.02841 0.02912 0.02951 0.80% Gravity::interpolate_monopole_grav() 21 0.02727 0.02787 0.0286 0.78% Castro::construct_new_gravity_source() 10 0.01979 0.02283 0.02411 0.66% VisMF::Write(FabArray) 2 0.01266 0.01398 0.0187 0.51% Castro::post_timestep() 10 0.01528 0.01574 0.01634 0.44% Castro::apply_source_to_state() 20 0.008673 0.01426 0.01624 0.44% MultiFab::Saxpy() 20 0.008622 0.01421 0.01619 0.44% Castro::Castro() 1 0.01019 0.01147 0.01399 0.38% FabArray::setDomainBndry() 41 0.004805 0.01041 0.01257 0.34% Castro::construct_old_source() 50 0.005024 0.01014 0.01195 0.32% Castro::construct_old_gravity_source() 10 0.004981 0.01007 0.01186 0.32% Castro::check_for_nan() 20 0.009739 0.01078 0.01165 0.32% MultiFab::contains_nan() 20 0.009715 0.01075 0.01163 0.32% Castro::initMFs() 1 0.006652 0.007746 0.009883 0.27% AmrLevel::AmrLevel(dm) 1 0.005564 0.006457 0.008125 0.22% StateData::define() 4 0.005553 0.006445 0.008111 0.22% Castro::computeNewDt() 9 0.006975 0.006984 0.006991 0.19% Castro::enforce_min_density() 62 0.005311 0.006113 0.006699 0.18% Castro::swap_state_time_levels() 10 0.003281 0.004424 0.005148 0.14% Castro::post_regrid() 1 0.001489 0.001947 0.002959 0.08% Castro::buildMetrics() 1 0.001696 0.001976 0.002544 0.07% Castro::finalize_do_advance() 10 0.000652 0.001482 0.001834 0.05% Amr::InitAmr() 1 0.0002712 0.0003751 0.0006413 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.295e-05 0.0003321 0.0004551 0.01% DistributionMapping::LeastUsedCPUs() 1 8.17e-06 0.0003255 0.0004487 0.01% Castro::enforce_consistent_e() 1 8.108e-05 9.9e-05 0.00014 0.00% FabArrayBase::getCPC() 41 6.669e-05 7.713e-05 8.8e-05 0.00% Castro::finalize_advance() 10 5.966e-05 6.64e-05 7.142e-05 0.00% Amr::writeSmallPlotFile() 1 3.099e-05 6.169e-05 6.986e-05 0.00% Castro::enforce_speed_limit() 62 2.447e-05 2.926e-05 3.491e-05 0.00% FabArrayBase::CPC::define() 2 2.195e-05 2.619e-05 2.907e-05 0.00% Gravity::swapTimeLevels() 10 5.956e-06 1.261e-05 1.672e-05 0.00% Gravity::set_mass_offset() 10 5.533e-06 1.026e-05 1.559e-05 0.00% Amr::initSubcycle() 1 7.761e-06 9.928e-06 1.315e-05 0.00% Castro::create_source_corrector() 10 6.781e-06 9.734e-06 1.29e-05 0.00% Castro::FluxRegCrseInit 10 6.137e-06 8.419e-06 1.059e-05 0.00% Castro::retry_advance_ctu() 10 3.41e-06 5.508e-06 6.645e-06 0.00% Castro::FluxRegFineAdd() 10 1.874e-06 2.216e-06 2.515e-06 0.00% DistributionMapping::Distribute() 1 9.71e-07 1.176e-06 1.49e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-1-g13aa4df0f5a4) finalized