MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-4-ge4ab0485621d) initialized Starting run at 05:39:49 UTC on 2022-10-06. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.10-4-ge4ab04856 Microphysics git describe: 22.10-2-gbaa4f033 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016281759 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.362959509 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.352428484 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.351298389 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.350176881 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.358795583 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.352832385 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.344189999 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.371224718 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.337565287 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.336749454 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.011478975 seconds Ending run at 05:39:53 UTC on 2022-10-06. Run time = 3.744250764 Run time without initialization = 3.538646298 Average number of zones advanced per microsecond: 0.741 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.741 ... 3.743 ... 3.744 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1402 2.4325 2.5663 68.54% Castro::do_advance_ctu() 10 0.05761 0.1919 0.4875 13.02% Gravity::make_radial_gravity() 21 0.3451 0.3555 0.3813 10.18% Castro::initData() 1 0.03981 0.0818 0.134 3.58% FabArray::ParallelCopy_finish() 41 0.03902 0.05932 0.1308 3.49% Castro::estTimeStep() 21 0.02576 0.08164 0.1217 3.25% FabArray::setVal() 143 0.05208 0.06714 0.07138 1.91% Castro::reset_internal_energy(Fab) 1008 0.04815 0.04993 0.05171 1.38% FabArray::ParallelCopy_nowait() 41 0.02755 0.04496 0.04988 1.33% StateData::FillBoundary(geom) 41 0.03642 0.04322 0.04778 1.28% Castro::normalize_species() 62 0.03991 0.04127 0.04274 1.14% FillPatchIterator::Initialize 41 0.02439 0.03717 0.04092 1.09% Gravity::interpolate_monopole_grav() 21 0.02635 0.02741 0.02788 0.74% Castro::construct_new_gravity_source() 10 0.01924 0.02286 0.02382 0.64% Castro::expand_state() 10 0.01008 0.01919 0.02221 0.59% Castro::initialize_do_advance() 10 0.01004 0.01858 0.02067 0.55% Castro::computeTemp() 63 0.01795 0.01898 0.01982 0.53% VisMF::Write(FabArray) 2 0.01372 0.01434 0.01715 0.46% MultiFab::Saxpy() 20 0.008633 0.01414 0.01624 0.43% Amr::writePlotFile() 2 0.01082 0.01359 0.01435 0.38% Gravity::get_new_grav_vector() 11 0.007585 0.01179 0.01292 0.35% FabArray::setDomainBndry() 41 0.0047 0.01111 0.01291 0.34% Castro::construct_old_gravity_source() 10 0.00486 0.01019 0.01218 0.33% MultiFab::contains_nan() 20 0.009533 0.01123 0.01201 0.32% Gravity::get_old_grav_vector() 10 0.005622 0.00965 0.01121 0.30% Castro::initialize_advance() 10 0.003332 0.008881 0.01095 0.29% main() 1 0.004482 0.007344 0.008276 0.22% Castro::initMFs() 1 0.006805 0.007313 0.008032 0.21% Castro::construct_new_source() 50 0.004864 0.006543 0.007147 0.19% Castro::enforce_min_density() 62 0.005339 0.006093 0.006623 0.18% StateData::define() 4 0.00571 0.006052 0.006388 0.17% Castro::swap_state_time_levels() 10 0.003317 0.004403 0.004657 0.12% Amr::coarseTimeStep() 10 0.0009402 0.001607 0.003135 0.08% Castro::buildMetrics() 1 0.00163 0.001727 0.001838 0.05% Castro::finalize_do_advance() 10 0.0006372 0.001487 0.001805 0.05% Amr::timeStep() 10 0.0001817 0.0002424 0.0004637 0.01% Amr::InitAmr() 1 0.0002771 0.0003069 0.0004266 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002964 0.0003124 0.0003184 0.01% Castro::clean_state() 62 0.0001347 0.0001608 0.0001778 0.00% DistributionMapping::LeastUsedCPUs() 1 6.939e-06 0.0001239 0.0001511 0.00% StateDataPhysBCFunct::() 41 8.891e-05 0.0001123 0.0001284 0.00% Castro::enforce_consistent_e() 1 7.861e-05 8.693e-05 9.833e-05 0.00% FabArray::ParallelCopy() 41 7.084e-05 8.11e-05 9.696e-05 0.00% Castro::do_old_sources() 10 4.365e-05 7.152e-05 9.29e-05 0.00% Castro::construct_old_source() 50 3.174e-05 7.035e-05 8.612e-05 0.00% Castro::do_new_sources() 10 4.598e-05 7.088e-05 8.116e-05 0.00% Amr::FinalizeInit() 1 4.443e-06 1.459e-05 7.986e-05 0.00% Castro::Castro() 1 5.735e-05 6.731e-05 7.912e-05 0.00% FillPatchSingleLevel 41 6.011e-05 6.908e-05 7.292e-05 0.00% Amr::writeSmallPlotFile() 1 4.345e-05 6.415e-05 7.26e-05 0.00% Castro::subcycle_advance_ctu() 10 3.864e-05 6.28e-05 7.245e-05 0.00% Castro::construct_old_gravity() 10 3.935e-05 5.322e-05 6.463e-05 0.00% FabArrayBase::getCPC() 41 4.81e-05 5.408e-05 6.453e-05 0.00% Castro::finalize_advance() 10 5.068e-05 5.48e-05 5.936e-05 0.00% Castro::apply_source_to_state() 20 3.226e-05 4.86e-05 5.68e-05 0.00% Castro::advance() 10 3.519e-05 4.451e-05 4.965e-05 0.00% Castro::construct_new_gravity() 10 4.043e-05 4.471e-05 4.698e-05 0.00% Amr::defBaseLevel() 1 2.313e-05 2.945e-05 4.367e-05 0.00% Castro::enforce_speed_limit() 62 2.251e-05 2.845e-05 3.559e-05 0.00% Castro::post_timestep() 10 1.555e-05 2.298e-05 2.898e-05 0.00% FabArrayBase::CPC::define() 2 2.087e-05 2.485e-05 2.681e-05 0.00% Castro::check_for_nan() 20 2.01e-05 2.466e-05 2.657e-05 0.00% Gravity::swapTimeLevels() 10 7.42e-06 1.312e-05 1.67e-05 0.00% Castro::create_source_corrector() 10 7.296e-06 1.093e-05 1.341e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.153e-06 1.029e-05 1.287e-05 0.00% Castro::post_init() 1 2.909e-06 4.909e-06 1.192e-05 0.00% Castro::computeNewDt() 9 8.319e-06 9.985e-06 1.175e-05 0.00% Gravity::set_mass_offset() 10 7.806e-06 1.015e-05 1.172e-05 0.00% Castro::FluxRegCrseInit 10 5.326e-06 8.507e-06 1.071e-05 0.00% Castro::post_regrid() 1 1.87e-06 3.81e-06 9.712e-06 0.00% Amr::initSubcycle() 1 8.166e-06 9.098e-06 9.555e-06 0.00% Castro::retry_advance_ctu() 10 4.898e-06 6.181e-06 7.194e-06 0.00% Castro::computeInitialDt() 2 3.67e-06 4.531e-06 6.734e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.992e-06 4.755e-06 6.622e-06 0.00% Amr::InitializeInit() 1 1.999e-06 3.019e-06 6.032e-06 0.00% Castro::FluxRegFineAdd() 10 1.595e-06 2.426e-06 3.249e-06 0.00% Amr::init() 1 1.835e-06 2.231e-06 2.768e-06 0.00% Amr::initialInit() 1 1.135e-06 1.481e-06 1.919e-06 0.00% DistributionMapping::Distribute() 1 9.68e-07 1.138e-06 1.351e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.741 3.743 3.744 100.00% Amr::coarseTimeStep() 10 3.519 3.519 3.519 93.98% Amr::timeStep() 10 3.508 3.509 3.51 93.74% Castro::advance() 10 3.493 3.494 3.494 93.31% Castro::subcycle_advance_ctu() 10 3.422 3.426 3.44 91.88% Castro::do_advance_ctu() 10 3.422 3.426 3.44 91.88% Castro::construct_ctu_hydro_source() 10 2.14 2.433 2.566 68.54% Gravity::make_radial_gravity() 21 0.3451 0.3555 0.3813 10.18% Gravity::get_new_grav_vector() 11 0.2309 0.2344 0.2366 6.32% Castro::construct_old_gravity() 10 0.2028 0.2117 0.2328 6.22% Gravity::get_old_grav_vector() 10 0.2019 0.2109 0.2322 6.20% FillPatchIterator::Initialize 41 0.1836 0.1961 0.2242 5.99% Castro::construct_new_gravity() 10 0.2042 0.2059 0.2076 5.54% Amr::init() 1 0.205 0.2052 0.2052 5.48% FillPatchSingleLevel 41 0.1308 0.1479 0.1951 5.21% Amr::initialInit() 1 0.1886 0.1888 0.1891 5.05% Castro::initialize_do_advance() 10 0.1744 0.1797 0.1846 4.93% FabArray::ParallelCopy() 41 0.08731 0.1044 0.1585 4.23% Amr::InitializeInit() 1 0.06067 0.1034 0.1568 4.19% Amr::defBaseLevel() 1 0.06067 0.1033 0.1568 4.19% Castro::initData() 1 0.04379 0.08575 0.1381 3.69% Castro::expand_state() 10 0.1254 0.1309 0.1367 3.65% FabArray::ParallelCopy_finish() 41 0.03902 0.05932 0.1308 3.49% Amr::FinalizeInit() 1 0.03226 0.08543 0.1282 3.42% Castro::estTimeStep() 21 0.02576 0.08164 0.1217 3.25% Castro::clean_state() 62 0.1117 0.1158 0.1193 3.19% Castro::computeInitialDt() 2 0.001709 0.05517 0.09787 2.61% Castro::initialize_advance() 10 0.05223 0.06778 0.07166 1.91% Castro::computeTemp() 63 0.0664 0.06922 0.07151 1.91% FabArray::setVal() 143 0.05208 0.06714 0.07138 1.91% Castro::do_new_sources() 10 0.05326 0.06265 0.06458 1.72% Castro::reset_internal_energy(MultiFab) 63 0.04845 0.05024 0.05203 1.39% Castro::reset_internal_energy(Fab) 1008 0.04815 0.04993 0.05171 1.38% Castro::do_old_sources() 10 0.03226 0.04572 0.05023 1.34% FabArray::ParallelCopy_nowait() 41 0.02764 0.04504 0.04996 1.33% StateDataPhysBCFunct::() 41 0.03652 0.04334 0.0479 1.28% StateData::FillBoundary(geom) 41 0.03642 0.04322 0.04778 1.28% Castro::normalize_species() 62 0.03991 0.04127 0.04274 1.14% Castro::construct_new_source() 50 0.02411 0.0294 0.03087 0.82% Castro::post_init() 1 0.02723 0.02926 0.02967 0.79% Amr::writePlotFile() 2 0.02764 0.02793 0.02816 0.75% Gravity::interpolate_monopole_grav() 21 0.02635 0.02741 0.02788 0.74% Castro::construct_new_gravity_source() 10 0.01924 0.02286 0.02382 0.64% VisMF::Write(FabArray) 2 0.01372 0.01434 0.01715 0.46% Castro::apply_source_to_state() 20 0.008677 0.01418 0.0163 0.44% MultiFab::Saxpy() 20 0.008633 0.01414 0.01624 0.43% Castro::post_timestep() 10 0.01492 0.01559 0.0162 0.43% FabArray::setDomainBndry() 41 0.0047 0.01111 0.01291 0.34% Castro::construct_old_source() 50 0.004892 0.01026 0.01226 0.33% Castro::Castro() 1 0.01062 0.01138 0.01221 0.33% Castro::construct_old_gravity_source() 10 0.00486 0.01019 0.01218 0.33% Castro::check_for_nan() 20 0.009553 0.01125 0.01203 0.32% MultiFab::contains_nan() 20 0.009533 0.01123 0.01201 0.32% Castro::initMFs() 1 0.006805 0.007313 0.008032 0.21% Castro::computeNewDt() 9 0.007045 0.007056 0.007064 0.19% Castro::enforce_min_density() 62 0.005339 0.006093 0.006623 0.18% AmrLevel::AmrLevel(dm) 1 0.005722 0.006063 0.006397 0.17% StateData::define() 4 0.00571 0.006052 0.006388 0.17% Castro::swap_state_time_levels() 10 0.003317 0.004403 0.004657 0.12% Castro::post_regrid() 1 0.001544 0.001899 0.003688 0.10% Castro::buildMetrics() 1 0.00176 0.001861 0.001987 0.05% Castro::finalize_do_advance() 10 0.0006372 0.001487 0.001805 0.05% Amr::InitAmr() 1 0.0002864 0.000316 0.0004347 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.194e-05 0.0001298 0.000159 0.00% DistributionMapping::LeastUsedCPUs() 1 6.939e-06 0.0001239 0.0001511 0.00% Castro::enforce_consistent_e() 1 7.861e-05 8.693e-05 9.833e-05 0.00% FabArrayBase::getCPC() 41 6.896e-05 7.893e-05 9.134e-05 0.00% Amr::writeSmallPlotFile() 1 4.345e-05 6.415e-05 7.26e-05 0.00% Castro::finalize_advance() 10 5.813e-05 6.573e-05 7e-05 0.00% Castro::enforce_speed_limit() 62 2.251e-05 2.845e-05 3.559e-05 0.00% FabArrayBase::CPC::define() 2 2.087e-05 2.485e-05 2.681e-05 0.00% Gravity::swapTimeLevels() 10 7.42e-06 1.312e-05 1.67e-05 0.00% Castro::create_source_corrector() 10 7.296e-06 1.093e-05 1.341e-05 0.00% Gravity::set_mass_offset() 10 7.806e-06 1.015e-05 1.172e-05 0.00% Castro::FluxRegCrseInit 10 5.326e-06 8.507e-06 1.071e-05 0.00% Amr::initSubcycle() 1 8.166e-06 9.098e-06 9.555e-06 0.00% Castro::retry_advance_ctu() 10 4.898e-06 6.181e-06 7.194e-06 0.00% Castro::FluxRegFineAdd() 10 1.595e-06 2.426e-06 3.249e-06 0.00% DistributionMapping::Distribute() 1 9.68e-07 1.138e-06 1.351e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-4-ge4ab0485621d) finalized