MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-4-ge4ab0485621d) initialized Starting run at 05:39:36 UTC on 2022-10-10. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.10-4-ge4ab04856 Microphysics git describe: 22.10-2-gbaa4f033 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015195808 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.367589376 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.37244823 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.345759305 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.345950441 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.36061889 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.353057745 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338010298 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.338536094 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.338694241 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339438538 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010682081 seconds Ending run at 05:39:39 UTC on 2022-10-10. Run time = 3.700290826 Run time without initialization = 3.518620353 Average number of zones advanced per microsecond: 0.745 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.698 ... 3.7 ... 3.7 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1125 2.4333 2.5328 68.45% Castro::do_advance_ctu() 10 0.04865 0.149 0.4744 12.82% Gravity::make_radial_gravity() 21 0.3456 0.3576 0.3764 10.17% Castro::initData() 1 0.03966 0.07911 0.1158 3.13% FabArray::ParallelCopy_finish() 41 0.0443 0.06169 0.1113 3.01% Castro::estTimeStep() 21 0.02882 0.06641 0.1083 2.93% FabArray::setVal() 143 0.07101 0.07198 0.07331 1.98% Castro::reset_internal_energy(Fab) 1008 0.04736 0.04997 0.05201 1.41% FabArray::ParallelCopy_nowait() 41 0.03105 0.04627 0.0515 1.39% StateData::FillBoundary(geom) 41 0.03829 0.04306 0.04656 1.26% Castro::normalize_species() 62 0.03967 0.04122 0.04203 1.14% FillPatchIterator::Initialize 41 0.02381 0.03751 0.04147 1.12% Gravity::interpolate_monopole_grav() 21 0.02584 0.02734 0.02792 0.75% Castro::construct_new_gravity_source() 10 0.02322 0.02377 0.02452 0.66% Castro::expand_state() 10 0.01358 0.02058 0.0234 0.63% Castro::initialize_do_advance() 10 0.01216 0.01903 0.02104 0.57% Castro::computeTemp() 63 0.01698 0.01888 0.01995 0.54% MultiFab::Saxpy() 20 0.01105 0.01501 0.01668 0.45% VisMF::Write(FabArray) 2 0.01217 0.01302 0.01562 0.42% Amr::writePlotFile() 2 0.01049 0.01304 0.01398 0.38% Gravity::get_new_grav_vector() 11 0.01018 0.01254 0.01395 0.38% FabArray::setDomainBndry() 41 0.005843 0.0113 0.01337 0.36% MultiFab::contains_nan() 20 0.01052 0.01137 0.01245 0.34% Castro::construct_old_gravity_source() 10 0.006574 0.0108 0.01222 0.33% Castro::initialize_advance() 10 0.01056 0.01093 0.01188 0.32% Gravity::get_old_grav_vector() 10 0.006149 0.009961 0.01171 0.32% Castro::initMFs() 1 0.006738 0.007214 0.007988 0.22% Castro::construct_new_source() 50 0.005065 0.006639 0.007276 0.20% main() 1 0.004522 0.006373 0.007183 0.19% Castro::enforce_min_density() 62 0.005887 0.00621 0.006673 0.18% StateData::define() 4 0.005654 0.005966 0.006354 0.17% Castro::swap_state_time_levels() 10 0.003443 0.004581 0.004769 0.13% Amr::coarseTimeStep() 10 0.0009382 0.001884 0.003169 0.09% Castro::finalize_do_advance() 10 0.001476 0.00184 0.002064 0.06% Castro::buildMetrics() 1 0.001584 0.001679 0.001831 0.05% Amr::InitAmr() 1 0.0002843 0.0003173 0.0004218 0.01% Amr::timeStep() 10 0.0001677 0.0002182 0.000379 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002884 0.0003137 0.0003278 0.01% Castro::clean_state() 62 0.0001433 0.0001768 0.0001993 0.01% DistributionMapping::LeastUsedCPUs() 1 6.893e-06 0.0001052 0.0001278 0.00% StateDataPhysBCFunct::() 41 9.409e-05 0.0001131 0.0001247 0.00% Amr::FinalizeInit() 1 3.891e-06 1.794e-05 0.0001111 0.00% Castro::construct_old_source() 50 3.026e-05 7.839e-05 0.0001032 0.00% FabArray::ParallelCopy() 41 6.088e-05 8.135e-05 0.0001003 0.00% Castro::do_new_sources() 10 4.261e-05 7.781e-05 0.0001001 0.00% Castro::enforce_consistent_e() 1 8.232e-05 8.81e-05 9.392e-05 0.00% Castro::Castro() 1 5.411e-05 7.445e-05 9.288e-05 0.00% Castro::do_old_sources() 10 3.774e-05 7.473e-05 9.101e-05 0.00% Amr::writeSmallPlotFile() 1 2.485e-05 6.164e-05 7.938e-05 0.00% FillPatchSingleLevel 41 6.126e-05 7.011e-05 7.538e-05 0.00% Castro::subcycle_advance_ctu() 10 4.664e-05 5.787e-05 7.477e-05 0.00% Castro::construct_old_gravity() 10 3.362e-05 5.806e-05 7.304e-05 0.00% Castro::advance() 10 3.348e-05 4.783e-05 6.976e-05 0.00% FabArrayBase::getCPC() 41 4.927e-05 5.626e-05 6.444e-05 0.00% Castro::apply_source_to_state() 20 3.406e-05 5.18e-05 6.067e-05 0.00% Castro::finalize_advance() 10 4.958e-05 5.372e-05 5.675e-05 0.00% Castro::construct_new_gravity() 10 3.694e-05 4.42e-05 5.189e-05 0.00% Amr::defBaseLevel() 1 2.409e-05 3.11e-05 3.912e-05 0.00% Castro::enforce_speed_limit() 62 2.455e-05 2.756e-05 3.174e-05 0.00% FabArrayBase::CPC::define() 2 2.374e-05 2.722e-05 3.069e-05 0.00% Castro::check_for_nan() 20 2.036e-05 2.503e-05 2.853e-05 0.00% Castro::post_timestep() 10 1.424e-05 1.856e-05 2.779e-05 0.00% Amr::initialInit() 1 1.273e-06 3.739e-06 1.828e-05 0.00% Gravity::swapTimeLevels() 10 8.324e-06 1.362e-05 1.675e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.821e-06 1.079e-05 1.591e-05 0.00% Castro::create_source_corrector() 10 8.165e-06 1.14e-05 1.399e-05 0.00% Amr::initSubcycle() 1 8.141e-06 9.822e-06 1.399e-05 0.00% Castro::computeNewDt() 9 8.443e-06 1.005e-05 1.154e-05 0.00% Gravity::set_mass_offset() 10 7.559e-06 9.623e-06 1.146e-05 0.00% Castro::FluxRegCrseInit 10 6.381e-06 8.691e-06 9.943e-06 0.00% Castro::retry_advance_ctu() 10 5.019e-06 6.028e-06 7.669e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.775e-06 5.185e-06 7.075e-06 0.00% Amr::InitializeInit() 1 2.054e-06 2.805e-06 5.198e-06 0.00% Castro::post_init() 1 3.426e-06 4.087e-06 5.044e-06 0.00% Castro::computeInitialDt() 2 3.084e-06 3.741e-06 4.926e-06 0.00% Castro::post_regrid() 1 1.884e-06 2.891e-06 4.064e-06 0.00% Castro::FluxRegFineAdd() 10 1.936e-06 2.365e-06 3.693e-06 0.00% Amr::init() 1 1.772e-06 2.325e-06 2.995e-06 0.00% DistributionMapping::Distribute() 1 9.08e-07 1.119e-06 1.316e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.698 3.7 3.7 100.00% Amr::coarseTimeStep() 10 3.501 3.501 3.501 94.61% Amr::timeStep() 10 3.489 3.49 3.491 94.35% Castro::advance() 10 3.474 3.475 3.475 93.91% Castro::subcycle_advance_ctu() 10 3.4 3.401 3.404 91.99% Castro::do_advance_ctu() 10 3.4 3.401 3.404 91.99% Castro::construct_ctu_hydro_source() 10 2.113 2.433 2.533 68.45% Gravity::make_radial_gravity() 21 0.3456 0.3576 0.3764 10.17% Gravity::get_new_grav_vector() 11 0.2314 0.2353 0.2378 6.43% Castro::construct_old_gravity() 10 0.2047 0.2146 0.2295 6.20% Gravity::get_old_grav_vector() 10 0.2038 0.2137 0.2288 6.18% Castro::construct_new_gravity() 10 0.2071 0.2104 0.2127 5.75% FillPatchIterator::Initialize 41 0.1926 0.2002 0.2106 5.69% Castro::initialize_do_advance() 10 0.1713 0.185 0.1925 5.20% Amr::init() 1 0.1811 0.1812 0.1812 4.90% FillPatchSingleLevel 41 0.1388 0.1514 0.1809 4.89% Amr::initialInit() 1 0.1657 0.1659 0.1661 4.49% FabArray::ParallelCopy() 41 0.09372 0.1081 0.1425 3.85% Castro::expand_state() 10 0.131 0.1358 0.1415 3.83% Amr::InitializeInit() 1 0.06057 0.1005 0.1379 3.73% Amr::defBaseLevel() 1 0.06057 0.1005 0.1379 3.73% Castro::initData() 1 0.04385 0.0831 0.1196 3.23% Castro::clean_state() 62 0.1099 0.1158 0.1192 3.22% FabArray::ParallelCopy_finish() 41 0.0443 0.06169 0.1113 3.01% Castro::estTimeStep() 21 0.02882 0.06641 0.1083 2.93% Amr::FinalizeInit() 1 0.0278 0.06544 0.1053 2.84% Castro::computeInitialDt() 2 0.001885 0.03929 0.07922 2.14% Castro::initialize_advance() 10 0.07057 0.0731 0.07455 2.01% FabArray::setVal() 143 0.07101 0.07198 0.07331 1.98% Castro::computeTemp() 63 0.06496 0.06916 0.07229 1.95% Castro::do_new_sources() 10 0.06426 0.06507 0.06577 1.78% Castro::reset_internal_energy(MultiFab) 63 0.04767 0.05028 0.05233 1.41% Castro::reset_internal_energy(Fab) 1008 0.04736 0.04997 0.05201 1.41% FabArray::ParallelCopy_nowait() 41 0.03113 0.04636 0.05158 1.39% Castro::do_old_sources() 10 0.03712 0.04687 0.05025 1.36% StateDataPhysBCFunct::() 41 0.03838 0.04317 0.04668 1.26% StateData::FillBoundary(geom) 41 0.03829 0.04306 0.04656 1.26% Castro::normalize_species() 62 0.03967 0.04122 0.04203 1.14% Castro::construct_new_source() 50 0.02947 0.03041 0.03105 0.84% Gravity::interpolate_monopole_grav() 21 0.02584 0.02734 0.02792 0.75% Amr::writePlotFile() 2 0.0259 0.02606 0.02629 0.71% Castro::post_init() 1 0.02558 0.02574 0.02589 0.70% Castro::construct_new_gravity_source() 10 0.02322 0.02377 0.02452 0.66% Castro::apply_source_to_state() 20 0.01108 0.01506 0.01674 0.45% MultiFab::Saxpy() 20 0.01105 0.01501 0.01668 0.45% Castro::post_timestep() 10 0.01426 0.01559 0.01649 0.45% VisMF::Write(FabArray) 2 0.01217 0.01302 0.01562 0.42% FabArray::setDomainBndry() 41 0.005843 0.0113 0.01337 0.36% Castro::check_for_nan() 20 0.01054 0.01139 0.01248 0.34% MultiFab::contains_nan() 20 0.01052 0.01137 0.01245 0.34% Castro::construct_old_source() 50 0.006605 0.01088 0.01231 0.33% Castro::construct_old_gravity_source() 10 0.006574 0.0108 0.01222 0.33% Castro::Castro() 1 0.01066 0.01125 0.01207 0.33% Castro::initMFs() 1 0.006738 0.007214 0.007988 0.22% Castro::computeNewDt() 9 0.00721 0.007232 0.007246 0.20% Castro::enforce_min_density() 62 0.005887 0.00621 0.006673 0.18% AmrLevel::AmrLevel(dm) 1 0.005664 0.005977 0.006362 0.17% StateData::define() 4 0.005654 0.005966 0.006354 0.17% Castro::swap_state_time_levels() 10 0.003443 0.004581 0.004769 0.13% Castro::finalize_do_advance() 10 0.001476 0.00184 0.002064 0.06% Castro::buildMetrics() 1 0.001698 0.001806 0.001967 0.05% Castro::post_regrid() 1 0.0015 0.001598 0.001638 0.04% Amr::InitAmr() 1 0.0002933 0.0003271 0.00043 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.164e-05 0.0001115 0.000136 0.00% DistributionMapping::LeastUsedCPUs() 1 6.893e-06 0.0001052 0.0001278 0.00% Castro::enforce_consistent_e() 1 8.232e-05 8.81e-05 9.392e-05 0.00% FabArrayBase::getCPC() 41 7.537e-05 8.348e-05 8.973e-05 0.00% Amr::writeSmallPlotFile() 1 2.485e-05 6.164e-05 7.938e-05 0.00% Castro::finalize_advance() 10 5.958e-05 6.478e-05 6.845e-05 0.00% Castro::enforce_speed_limit() 62 2.455e-05 2.756e-05 3.174e-05 0.00% FabArrayBase::CPC::define() 2 2.374e-05 2.722e-05 3.069e-05 0.00% Gravity::swapTimeLevels() 10 8.324e-06 1.362e-05 1.675e-05 0.00% Castro::create_source_corrector() 10 8.165e-06 1.14e-05 1.399e-05 0.00% Amr::initSubcycle() 1 8.141e-06 9.822e-06 1.399e-05 0.00% Gravity::set_mass_offset() 10 7.559e-06 9.623e-06 1.146e-05 0.00% Castro::FluxRegCrseInit 10 6.381e-06 8.691e-06 9.943e-06 0.00% Castro::retry_advance_ctu() 10 5.019e-06 6.028e-06 7.669e-06 0.00% Castro::FluxRegFineAdd() 10 1.936e-06 2.365e-06 3.693e-06 0.00% DistributionMapping::Distribute() 1 9.08e-07 1.119e-06 1.316e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-4-ge4ab0485621d) finalized